Alat002864.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aquatica lateralis
Gene Symbol
Znf639
Assembly
None
Location
Alat1.3:1045523-1050899[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 2.1e-05 0.001 17.6 1.1 1 23 157 179 157 179 0.99
2 10 0.0067 0.32 9.8 0.4 3 23 187 207 185 207 0.91
3 10 1.7 79 2.2 3.1 2 23 210 230 209 231 0.68
4 10 4.7e-05 0.0022 16.6 0.4 1 23 234 257 234 257 0.97
5 10 1.3e-06 6e-05 21.5 1.6 1 23 263 285 263 285 0.97
6 10 0.00074 0.035 12.8 0.1 1 23 291 313 291 313 0.98
7 10 3.3e-06 0.00016 20.2 3.5 2 23 319 341 318 341 0.96
8 10 2.1e-05 0.00098 17.7 4.9 1 21 347 367 347 369 0.95
9 10 2.6e-08 1.3e-06 26.8 1.0 1 23 375 397 375 397 0.99
10 10 8.8e-06 0.00042 18.8 2.9 1 19 403 421 403 424 0.93

Sequence Information

Coding Sequence
ATGAATGTTTGTAGGTTATGTTTATACGAGTACAAAGCCCACGAAGAATCATTTTTATCAATTTGGGATAGCGACGAAGACTTACCTGCAAAAATCCTAAATTGTGTATCCATAGAAGTAACGAAAGATGATAATTTACCTTCGACTGTCTGTGTTTCATGTGTACAACAAATAACTAATTGGGAGAAGTTTCGTAACGAATGCCATAAATCAAATGAACTTCTGTTGAAAGCTTCAGTGGAACAATTACAACATGATAATGTAACTATATTTATTTTGGAGGAAGAGTCAGATTCTATTGAAGAAAAGTCTAGGAAAAAATTAAAACGATGCAAGTTGAAAGTGAACAAAGAACAGACTGAAATTTACTTAGAACCAGATAAAATCGAGGATTATAGAGATGATATCGACTATTTGGAATCTGGATTTTTGGATTACTCCTTCAAAAACAGTTTTTCGGAAAACTCGTATCAATGTGCAATTTGTGGTGAAGAATTTAAGAATTGTTTCGAATATCTCGATCATCAAAACATTCATGATGGAGAACCTGTTTTCGGATGCGATAAATGCTCAGAAGTATACAGTACGAGAAAGGAGTTGGTGGAACATGATAGAAATCATCGCACATCGTGTCCTCATTGTGGAAAATTAATTTTAAAAACAAGTATGAACTTACATTTGATCAAACATACCGATAAGTTTAAATGCGATCAATGTGATGGTCGTTTTAATTCCAATGCATCTCTATCTCAACACACTATAACAGTTCACACGGATATAAAAGATCATATTTGTGAGACTTGCGGTAAACGGTTCTCTTCGCAAACTGCAATGCGGGTTCATATAAAGTCCCACAGCGATAAACGTTTATATCCTTGTAAATTGTGTAACTACGCAGGACGGACTGCTTCTGCAATTTACGTACACATGTCGACACATGCAAATGATCTTTGCGTTTGTGAAATTTGTTCAAAAACTTTCAAGAGTACTCGTAATTTAAACGATCATTTGAGAAGGTCTCATACAAAAGAAAAGAAGCATCAGTGTACATATTGTGATAAAAAATTTGTGGACAAGTATATGTTAAGTGTTCACATAAGATGTCATACAGGAGTAAGACCTTATCGTTGTACGTATTGTCAAAAGTCGTTTATTAGGTCTGATGGTTTAAAAGAACATATGGCGACTCATGGTCAACGAGTGTTACACGAATGTAAAGGGTGTGGTAAAAAATTTGCTTCAAAGCGAAGTCTTACTAGACATAACTGTATATGTAGTGTTTAA
Protein Sequence
MNVCRLCLYEYKAHEESFLSIWDSDEDLPAKILNCVSIEVTKDDNLPSTVCVSCVQQITNWEKFRNECHKSNELLLKASVEQLQHDNVTIFILEEESDSIEEKSRKKLKRCKLKVNKEQTEIYLEPDKIEDYRDDIDYLESGFLDYSFKNSFSENSYQCAICGEEFKNCFEYLDHQNIHDGEPVFGCDKCSEVYSTRKELVEHDRNHRTSCPHCGKLILKTSMNLHLIKHTDKFKCDQCDGRFNSNASLSQHTITVHTDIKDHICETCGKRFSSQTAMRVHIKSHSDKRLYPCKLCNYAGRTASAIYVHMSTHANDLCVCEICSKTFKSTRNLNDHLRRSHTKEKKHQCTYCDKKFVDKYMLSVHIRCHTGVRPYRCTYCQKSFIRSDGLKEHMATHGQRVLHECKGCGKKFASKRSLTRHNCICSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00153907;
90% Identity
iTF_00153907;
80% Identity
-