Basic Information

Insect: Aquatica lateralis
Gene Symbol: -
Assembly: None
Location: Alat1.3:1061750-1064423[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5e-05 0.0024 16.5 2.6 1 23 34 58 34 58 0.91

2 16 0.016 0.77 8.6 2.3 2 23 67 88 66 88 0.94

3 16 0.089 4.2 6.2 2.1 3 23 96 117 96 117 0.97

4 16 0.094 4.5 6.2 0.4 1 23 124 148 124 148 0.93

5 16 2.9e-06 0.00014 20.3 3.0 1 21 156 176 156 177 0.93

6 16 0.00013 0.0062 15.1 1.4 1 23 185 207 185 207 0.99

7 16 2.3e-05 0.0011 17.5 0.5 3 23 215 235 213 235 0.97

8 16 5e-05 0.0024 16.4 3.1 1 23 241 263 241 263 0.95

9 16 9.8e-05 0.0047 15.5 1.4 1 23 269 291 269 291 0.99

10 16 0.00011 0.0052 15.4 1.2 3 23 433 453 432 453 0.97

11 16 5.1e-05 0.0024 16.4 3.2 2 23 492 514 491 514 0.89

12 16 0.00042 0.02 13.6 0.8 1 21 524 544 524 545 0.94

13 16 0.0014 0.067 11.9 5.6 1 23 553 575 553 575 0.98

14 16 7.2e-06 0.00034 19.1 1.3 1 23 581 603 581 603 0.95

15 16 0.00017 0.0082 14.8 0.6 1 23 609 631 609 631 0.95

16 16 0.97 46 3.0 3.4 3 23 639 659 637 659 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5e-05	0.0024	16.5	2.6	1	23	34	58	34	58	0.91
2	16	0.016	0.77	8.6	2.3	2	23	67	88	66	88	0.94
3	16	0.089	4.2	6.2	2.1	3	23	96	117	96	117	0.97
4	16	0.094	4.5	6.2	0.4	1	23	124	148	124	148	0.93
5	16	2.9e-06	0.00014	20.3	3.0	1	21	156	176	156	177	0.93
6	16	0.00013	0.0062	15.1	1.4	1	23	185	207	185	207	0.99
7	16	2.3e-05	0.0011	17.5	0.5	3	23	215	235	213	235	0.97
8	16	5e-05	0.0024	16.4	3.1	1	23	241	263	241	263	0.95
9	16	9.8e-05	0.0047	15.5	1.4	1	23	269	291	269	291	0.99
10	16	0.00011	0.0052	15.4	1.2	3	23	433	453	432	453	0.97
11	16	5.1e-05	0.0024	16.4	3.2	2	23	492	514	491	514	0.89
12	16	0.00042	0.02	13.6	0.8	1	21	524	544	524	545	0.94
13	16	0.0014	0.067	11.9	5.6	1	23	553	575	553	575	0.98
14	16	7.2e-06	0.00034	19.1	1.3	1	23	581	603	581	603	0.95
15	16	0.00017	0.0082	14.8	0.6	1	23	609	631	609	631	0.95
16	16	0.97	46	3.0	3.4	3	23	639	659	637	659	0.93

Sequence Information

Coding Sequence: ATGGACGGTTTTTCTCACGATAAATTAATTGAGGAGTCAAAACTAATAGACGAAACAAAAAATACTACAGTTGTTACAGATAACGAGTTAAAATCTTTATTTTATTGCACACACTGTGGAAAAGAATATAAAACTCTAGCTAGATTGCAGAAGCACGAGAGAGTGTTTTTGCATACACCTGCGGAGCAAAGTGAAAAGTCTTGTGGCTCTTGTGGACAAACTTTTAAATATACGAAGAGGTTGAAAACACACGAGTTTATGCACGAGGGTGAGGCACAGTTGTGGTGCAAGCATTGTGTTAAGTATTTTCCTAGTCAAGAAGATAAAGAGTTACATAAAATGAAGGAACACCCGAAAAGGAAGAAGAAACACAAATGTAAAATCTGCCCGGACGTGGTTTTTGAAACTGAAGAAGAATATTTCCTACACATAAACGATACTCATAAAGGTAAATTCGGCGACTACCACATGTGCAGCGACTGCGGCAAACAATTTAAAACGAAAAGCGAATTGACGCACCACAACAGATCAAAATGCGGCACAGTTAAACAGTACACATGCAAGGTCTGTGACCAAAAACTAATGACAGCAGGTTCTTTGCACAATCACATGCTGAGACACACGGTTAAATGTTCGAATATGTGCGGATACTGCGGAAAAATGTTTTTGACGAGGGGACAATTAAAAGTGCACGAACGGACGCATACTCAAGAAAAGGCTTTTGTTTGTAACGTATGTGGAAAAGGGTTTTGTCATCGTCAGAGTTTAATAACGCACAGTACTATACACACTGGCGTGAAGCCGTACCAATGCGAAAATTGCGGAAATGCGTTCAGCTGCGTTGGTAACTTAATCAAACATAGAAGAACTCACGCCGATACTTGTGGTACTGTACCGTTAACTAGTCATCGCGTTAATAATCCCTCTACGAAAATGAAAGTGAAAATGAACACGCCGTTGACGTCCAAATTAAAGACTATGAAGAAAGAAAAGGAAAAAGAGGATAAATTGATCGCTTGCAAAAACAAGCTACAACAAAAGACTGATACAAGTGAAACGAATGATACTGGTGATAAAGAGCTTGAGTATGAAGTTATGGATGCGGTATGTGAAAATGAAGAAAATGTTAGTAGTTTAGCTGATGTGATCAAAAGAGAAGAACCGACGAGTAGAGAGTCTCACAATAAAAACGATGATGAAACCGGTATAGAAGAAACGAACACAAAAAAATCTGAATCGGATTTTGAAGATTTCTTGATAGAGCGTGGTATAGTTGAAGAAACGTTTGAAAGCTTGTGTCGGTATTGCGGGAAAAGTTACACTAATATGAGGTGGTTGTTTCGACATGAGAAAGAGCACGAAGGAGTGCACGCGAAGAATTTGAATCAATTTAAGTGTGCGTGTTGTAAAATGACGTTCCCTACTCGGGAGCAGTGTAAAGAACACAAACACCGAGTGCACGCCGATTTATTAAGTTGCCAAGATTGCGATAAAATATTTTCCAATAAAGATTCGTTGCGTTCGCACTGCAGGTTATTTCACAAAGGTCTTCCAAAAAAAGTCTACATTTACGTTTGCGAAAAATGCGGTGTACAATTCAGGCAAAAGGCTTTTTTGAACTATCACAAGAAGAACAACTGCGGTTCGGGACCTATTTACGAGTGTCACGTGTGCGGAAAAGGTTTCCACAGTATCCACACGCGTCGGTCTCATCTGCGCATACACGATCCTAAGAAAAAATTTTTGTGTAAATACTGTGGGAAAAGTTTTAGGTGGAAAGGGCAGCTGAAAGTGCACGAGCGTAGTCATACCGGAGAGAAGCCTTTTAAGTGTTTGTACTGTCCAAAAGCGTTCGGGTATCGTGAAAGTTTAATTACTCATAGTAGTTTACATACGGGCATTAAACCACATTTGTGTCAAGCTTGCGGTTCGCGATTTTCGTGTATTGGGAATTTGATCAAACACAGGACTACACATGCGAGTACTTGTGGAGTGTGGTATTCAAAGAACCAGTAA
Protein Sequence: MDGFSHDKLIEESKLIDETKNTTVVTDNELKSLFYCTHCGKEYKTLARLQKHERVFLHTPAEQSEKSCGSCGQTFKYTKRLKTHEFMHEGEAQLWCKHCVKYFPSQEDKELHKMKEHPKRKKKHKCKICPDVVFETEEEYFLHINDTHKGKFGDYHMCSDCGKQFKTKSELTHHNRSKCGTVKQYTCKVCDQKLMTAGSLHNHMLRHTVKCSNMCGYCGKMFLTRGQLKVHERTHTQEKAFVCNVCGKGFCHRQSLITHSTIHTGVKPYQCENCGNAFSCVGNLIKHRRTHADTCGTVPLTSHRVNNPSTKMKVKMNTPLTSKLKTMKKEKEKEDKLIACKNKLQQKTDTSETNDTGDKELEYEVMDAVCENEENVSSLADVIKREEPTSRESHNKNDDETGIEETNTKKSESDFEDFLIERGIVEETFESLCRYCGKSYTNMRWLFRHEKEHEGVHAKNLNQFKCACCKMTFPTREQCKEHKHRVHADLLSCQDCDKIFSNKDSLRSHCRLFHKGLPKKVYIYVCEKCGVQFRQKAFLNYHKKNNCGSGPIYECHVCGKGFHSIHTRRSHLRIHDPKKKFLCKYCGKSFRWKGQLKVHERSHTGEKPFKCLYCPKAFGYRESLITHSSLHTGIKPHLCQACGSRFSCIGNLIKHRTTHASTCGVWYSKNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -