Basic Information

Insect: Aquatica lateralis
Gene Symbol: -
Assembly: None
Location: Alat1.3:417467-425998[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.5e-06 0.00041 18.9 3.2 2 23 204 225 203 225 0.98

2 11 6.5e-07 3.1e-05 22.4 1.2 1 23 231 253 231 253 0.99

3 11 1.7e-05 0.00082 17.9 4.6 1 23 261 283 261 283 0.99

4 11 0.00016 0.0077 14.9 1.5 1 23 289 311 289 311 0.98

5 11 0.0026 0.12 11.1 0.4 1 23 323 345 323 345 0.96

6 11 3.4e-07 1.6e-05 23.3 2.8 1 23 351 373 351 373 0.96

7 11 5.3e-06 0.00025 19.5 0.5 1 23 379 401 379 401 0.99

8 11 2.9e-07 1.4e-05 23.5 0.6 1 23 407 429 407 429 0.98

9 11 1.9e-05 0.00089 17.8 1.5 2 23 436 457 435 457 0.97

10 11 4.9e-05 0.0023 16.5 0.1 1 23 463 485 463 485 0.98

11 11 2e-08 9.4e-07 27.2 0.5 1 23 491 513 491 513 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.5e-06	0.00041	18.9	3.2	2	23	204	225	203	225	0.98
2	11	6.5e-07	3.1e-05	22.4	1.2	1	23	231	253	231	253	0.99
3	11	1.7e-05	0.00082	17.9	4.6	1	23	261	283	261	283	0.99
4	11	0.00016	0.0077	14.9	1.5	1	23	289	311	289	311	0.98
5	11	0.0026	0.12	11.1	0.4	1	23	323	345	323	345	0.96
6	11	3.4e-07	1.6e-05	23.3	2.8	1	23	351	373	351	373	0.96
7	11	5.3e-06	0.00025	19.5	0.5	1	23	379	401	379	401	0.99
8	11	2.9e-07	1.4e-05	23.5	0.6	1	23	407	429	407	429	0.98
9	11	1.9e-05	0.00089	17.8	1.5	2	23	436	457	435	457	0.97
10	11	4.9e-05	0.0023	16.5	0.1	1	23	463	485	463	485	0.98
11	11	2e-08	9.4e-07	27.2	0.5	1	23	491	513	491	513	0.98

Sequence Information

Coding Sequence: ATGGACATAAAACCGGAACAAATGCAACAGCAGCAGCAACAACAATTCGATATAAGCAAAATATGTCGAGCTTGTCTTACAGAAAAAGGTGAAATGCGTTCGGTGTTTCTAGCCGATGAATCCATTGGACAAACTATGAGGCTTTCCGAAATGATAATGGGTTTTTCTAGTGTTCAGATTGAAAATGGAGATGGTTTACCAGGTTCAATATGTCTGCAATGTATTCATCAAGTAAGCAGAGCGTTTTCATTCAAACAACTATGCGAGCAATCGGATGCAAATTTAAGACAATATCTTGGAAAACCATTACATCCAAAACCGTGTAAACAGGAAGATGAAGATGCATCACACGACATCTATTCGTCAAGTTTTATGCTGGATAATTTTGGCCTCGAAGATTCGTCGAACGACAGTGACGATTCGTTTAAGCAAGATTTTACGTTATTAAGCCAAATGAATTCGGAAAATCCAAGCGACGAAAAAGCCATAGCACAAAAACAACTATTAAAAGCGGCAAAGTTGCAAAAGTGCAAACTTACTAAGAAAAAGCTTCTAGCAAAAGCTGGAGGAAAAGCAAGTGCTTTAAAAAAATTAAAACGTAACACCAATCAGTGTAATGTATGTAAAAAGCAGTTTATAAATTTAAAGTCGTTTCGCAAGCATCTAAGGACACATATAGAAGATCGCCCTTATAAGTGTAAACTTTGTCCTAGAGGCTTTACCGAAGAAAATTATTTAAACAATCATATGCGAACTCACATGCCAGAAGATCAAAAACCTTACCAATGTAAACTTTGCAATAAGAGGTTTATCCATACAACTTTATTAAATAAACATTTATTGAAACACAGTGGGGAAAAACCGTTTGTTTGCAAAATCTGCAATAAAGGCTGTTACGCAGAAAATAGTTTACTGAAGCATATGAAAATTCACGAGAAAAAAGAGGGCGATCCTGGATTGTTGAAGCATATTTGTGATTATTGCAAGAGTGAGTTTCCCGATGCCAATACTTTAGATGTACATATTAAGCAACACACTGGGGATCGACCGTTTCTTTGTAATATGTGTGGAAAATGTTTTCCTCAACGGTTTAATTTGGAGTTACATTTACGAACACATACTGGTGAGCGTCCGTTTACGTGCGAAGTTTGTAAAAACGGTTATGTATCAAAAGCAAGTTTGAAAATACATATGAGAACGCACACAAATGAAAGACCATTTGTTTGTGACTTTTGTGGAAAAGCTTTTAGACAGTCAGGCGATCTAACGAGTCATAAGAGGTTGCACGGTACTGAAAAACCTATCGAGTGCTCTGTTTGCCAAAAGAGATTTACAACGGTGATGAAACTGAAGTACCACATGCGAAATCACACTGGCGAGCGTCCATACGTATGTAGTGTTTGTGGTAGAGGATTTACAGTCAATACTATTTTATTGCGTCATTTACGAGTTCATTCCGGTGAAAGGCCTTACGTATGTGTTACTTGTGGAAAAGCTTTTTCTCAATCGAGCACTCTAAATACCCACATGAAGGTTCATGCCCCATCGCCTAAATATAATACTCAAGAGACTCAATCGAGAATGCCGAAGTTTTCAAATGCAAATGAAGTTAAATTTCACGGAAGTAATAATCAGCAAAACAATCGACTACTTCAACCAACAGATAATAGAATGATGCAACCTGAACCGCCTCGCATGATGCAGCAAGACACAACTCGTATGATTTCTAATGACGGATCGAGAATTATAAACGATGCTCATGCAATTACCGATCACCGAATACTGTTAAACGAATCCGCTCGACTTCATTTGGTAGACGTAAGTGAACCACCGAGACTTTTGGTTAACGATAACACCAGGTTGTTAACTGGAAACGATAATCGATTGCTCACAAATGACAACACTCGTTTACTGGCTAATATGGGTGATAGCAGTAGGTTATTAACTAACGATAATTCTAGGTTGTTATCGAATGATAACGCAAGACATTTAGCTGTAATTGAAAGTTCGCGAATTTTGGCTGATAAATATCTTGCAAATTACGACCCTTACCATCGAGGACATCTTTAG
Protein Sequence: MDIKPEQMQQQQQQQFDISKICRACLTEKGEMRSVFLADESIGQTMRLSEMIMGFSSVQIENGDGLPGSICLQCIHQVSRAFSFKQLCEQSDANLRQYLGKPLHPKPCKQEDEDASHDIYSSSFMLDNFGLEDSSNDSDDSFKQDFTLLSQMNSENPSDEKAIAQKQLLKAAKLQKCKLTKKKLLAKAGGKASALKKLKRNTNQCNVCKKQFINLKSFRKHLRTHIEDRPYKCKLCPRGFTEENYLNNHMRTHMPEDQKPYQCKLCNKRFIHTTLLNKHLLKHSGEKPFVCKICNKGCYAENSLLKHMKIHEKKEGDPGLLKHICDYCKSEFPDANTLDVHIKQHTGDRPFLCNMCGKCFPQRFNLELHLRTHTGERPFTCEVCKNGYVSKASLKIHMRTHTNERPFVCDFCGKAFRQSGDLTSHKRLHGTEKPIECSVCQKRFTTVMKLKYHMRNHTGERPYVCSVCGRGFTVNTILLRHLRVHSGERPYVCVTCGKAFSQSSTLNTHMKVHAPSPKYNTQETQSRMPKFSNANEVKFHGSNNQQNNRLLQPTDNRMMQPEPPRMMQQDTTRMISNDGSRIINDAHAITDHRILLNESARLHLVDVSEPPRLLVNDNTRLLTGNDNRLLTNDNTRLLANMGDSSRLLTNDNSRLLSNDNARHLAVIESSRILADKYLANYDPYHRGHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00741130;
90% Identity: iTF_00003207;
80% Identity: -