Basic Information

Insect: Aquatica lateralis
Gene Symbol: -
Assembly: None
Location: Alat1.3:161023-165479[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0024 0.12 11.1 0.1 2 23 179 200 178 200 0.97

2 11 6.9e-05 0.0033 16.0 0.3 2 23 228 250 228 250 0.95

3 11 1.8e-06 8.5e-05 21.0 1.1 1 23 260 282 260 282 0.99

4 11 1.6e-05 0.00078 18.0 1.8 2 23 289 310 288 310 0.96

5 11 3.7e-09 1.7e-07 29.5 1.5 1 23 316 338 316 338 0.98

6 11 2.9e-07 1.4e-05 23.5 0.3 1 23 344 366 344 366 0.97

7 11 5.7e-06 0.00027 19.4 2.5 1 23 372 394 372 394 0.98

8 11 7.6e-05 0.0036 15.9 4.8 1 23 400 422 400 422 0.98

9 11 1.2e-05 0.00058 18.4 0.7 1 23 428 450 428 450 0.97

10 11 2e-07 9.7e-06 24.0 0.2 1 23 456 478 456 478 0.99

11 11 5.4e-05 0.0026 16.4 2.7 1 23 484 507 484 507 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0024	0.12	11.1	0.1	2	23	179	200	178	200	0.97
2	11	6.9e-05	0.0033	16.0	0.3	2	23	228	250	228	250	0.95
3	11	1.8e-06	8.5e-05	21.0	1.1	1	23	260	282	260	282	0.99
4	11	1.6e-05	0.00078	18.0	1.8	2	23	289	310	288	310	0.96
5	11	3.7e-09	1.7e-07	29.5	1.5	1	23	316	338	316	338	0.98
6	11	2.9e-07	1.4e-05	23.5	0.3	1	23	344	366	344	366	0.97
7	11	5.7e-06	0.00027	19.4	2.5	1	23	372	394	372	394	0.98
8	11	7.6e-05	0.0036	15.9	4.8	1	23	400	422	400	422	0.98
9	11	1.2e-05	0.00058	18.4	0.7	1	23	428	450	428	450	0.97
10	11	2e-07	9.7e-06	24.0	0.2	1	23	456	478	456	478	0.99
11	11	5.4e-05	0.0026	16.4	2.7	1	23	484	507	484	507	0.95

Sequence Information

Coding Sequence: ATGAAATTGGATAAAATATGTCGAACTTGTTTGTTGGAAAAAACTCCTTTAAAATCGGTATTTGGAGCTTGCTTACCGAACATGTTGATGACTATTGCTTCGATTCAGGTATTAGACGGTGACGGTTTACCTAATCAAATTTGTATTCAATGCCTTCAAATGGTTAATAGAGCTTATACTTTTAAGCAACAGTGTGAAAAGTCGGATGCAACTTTAAGAGATTATTTAAACAAGATTAATTTGCAGAATATTAATTTAAACAGTGCACATAGTCAAATTTTTGGTGCCAGCGAGGTCCTACAACAAACCTCTTTGTTTACTGAGATTTTTGGTAGTGATACGACACATTCTCTTGTAGATAATTTTGCTTCAACAAATTCCAATACAGTTGTGTCTGATTTTGCCGATACTATGCAAAGTTTACAAACAATTGCTGAACAATGTTTACCTGAAACTTGGGACAGTGACTTAATTGGGACCCATAGTAGTTCTGAAGATACAACTTGTAATAGTTTAAATTTGGAATCCTATTTAAAATGCCAATTTTGTGAACTGTCTTATGGAGATGAATGGAGTTTAGCGGAACATATTAAGATCCACACGGGACAAGCATTAGCGAAGCATATTAATATTAATTCACACATTTTAACTGATACTATGAATCAAACAAAAAAATTGCCAACTTGCAATGTGTGTGGTAAACAATATGCAGATACAGCTACTCTTAAAAATCATGTTAAACAGGAACATCCTCATATAAAAAATGCTGACAAGAATTATGTTTGTTCTATATGTGATAAAAGGTATTCTCAAAACAAGTTTTTAGTATTACATTTACGATCGCATACCGGTGAACGGCCACTGCATTGTGGAATTTGTGGTAAAGACTTTTCTCTACCCAGTTCTTTACACAAACATCGCCTAGTCCACATACAAGAAAGAAAATTCAACTGTACCTTATGTGGCAAGTCGTTCAAACAAATGTCTAATCTCACAGCACATATGAGAAGTCACACAGGTGATAAATCGTTTATATGTACAGTATGTGGTAAAGCATGCGCGACCAACGTTAATTTAGAAATACACATGCGATTACACACTGGCAAAAAACCGTATCAATGCTCACAGTGTGAAAGCGCTTTTACTACTAGTAGTCAATTGAAGAAACACTTTATGAGACACACTGGAGAGAAACCGTACAAATGTTGGCAGTGTGGAAAATGTTTTCGTCAAAAAGACACGAGAGACACACATGTGCGATATCACACGGGCGAAAGACCATTTGCGTGTCAATTGTGTTCTAAAACTTACATTGCAGCTAGCCATTTAAGGATTCACATGAGAGGACACACTGGAGATCGTAAATATCAATGTAATATATGTCCTAAAGCTTTTATCCAAGCCCGTACATTACGAATTCATTTAGAAACTCATAATAATGAAAAGTTGTATCTATGCAGCTATTGCGGCCAAACACTTTCTACAAAAGCTTTATTAAACAAACATAAAAAAGTATGCCATGTTACTATGTAA
Protein Sequence: MKLDKICRTCLLEKTPLKSVFGACLPNMLMTIASIQVLDGDGLPNQICIQCLQMVNRAYTFKQQCEKSDATLRDYLNKINLQNINLNSAHSQIFGASEVLQQTSLFTEIFGSDTTHSLVDNFASTNSNTVVSDFADTMQSLQTIAEQCLPETWDSDLIGTHSSSEDTTCNSLNLESYLKCQFCELSYGDEWSLAEHIKIHTGQALAKHININSHILTDTMNQTKKLPTCNVCGKQYADTATLKNHVKQEHPHIKNADKNYVCSICDKRYSQNKFLVLHLRSHTGERPLHCGICGKDFSLPSSLHKHRLVHIQERKFNCTLCGKSFKQMSNLTAHMRSHTGDKSFICTVCGKACATNVNLEIHMRLHTGKKPYQCSQCESAFTTSSQLKKHFMRHTGEKPYKCWQCGKCFRQKDTRDTHVRYHTGERPFACQLCSKTYIAASHLRIHMRGHTGDRKYQCNICPKAFIQARTLRIHLETHNNEKLYLCSYCGQTLSTKALLNKHKKVCHVTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00854459; iTF_00003195;
90% Identity: iTF_00003195;
80% Identity: -