Basic Information

Gene Symbol
JARID2
Assembly
None
Location
Alat1.3:1337206-1348142[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.8e-23 2.4e-19 67.7 0.0 6 89 1449 1530 1445 1530 0.93

Sequence Information

Coding Sequence
ATGGTTATTAACCGAAAGGAGATTAAAAGAAAACGTAAAGTCGTTAACTCGGATAGCAATTTGCTGAATGAAACTCCAAAAAGGACCAAAGTGCATGCTCAAAGAAAATTTGCTCAAGGATCAAATGTGAGCAGTCCGGTTATAACCCCAGTTAAAGAAATTGAGAAACAAGATAAACCGAGACTCGATGTTCTTCCAGAACCACAAGAACTTTTACCTATGAACAGACCACACACTGAGGATTTTTTAACTTTTTTGTGTTTTCGTGGCACATCAATGCTTCCGCCCAATTTGAACTTCTTTAATACTGCAACTATGGATTCAAGAACACCGACGTTGACTATACAGAAAGAACCAATTACCGTGTGTCCACCAATTGCTAACATCAACACAAGATCATCAGTAAGTAGTAGTGAACGACCTTTTATTGCTTTCGGTGTGCGAAAACGAGCTGATCCGATACTAGTCAGCAAACACATGGACAAAAAGCGTCGACACGCGTTAGCATTACAAGCCTTACGCCGTAAATATCAAGAACAAAAAATGGCTAAAATACGAGCAGTCACTATTAGCAAATTATCAGAAAAAGTCACCAGCAAGAGTGTTGTTCGAACTAGGTCAATCACTAAAAATGAAACTACAAAAAAAAGCATCCCACAAAAAACTCGTGTCAAGATTATCTCCACAAAACATGTTAAAGTAACAACACGGTCTTCAATCAAAACACCTTTACGAGCAAACTTTACAACTCCTATTCGCTCGACGATACAGAAGAAAATGTGCTTAAGAAGTTTTCGTGGTCGGTTCATACAACGCGAGTTGACAATCAAGAAATCGAAAAAGAAAAATACAACAAAGATTATAAAAAAAGTTAAGACCAAACAAACGAGAGAAATTTCTTCAGAGTTTTCGTCGGACGATGATCAACCTTTAAAATCGTTTAAGGTTAATAAGGCTAACAAGATTGTAACTAAAAGAGCAGCCGTCAGTAAGAAACCGATAGAACTGAACTTCCGCGTCACTCGAGCACATCCAGTACTGGTTAAAAGTAACGACCCGACTTTTATACGCAAAATTCACTTGACTAAATCTTTGCACTCCAAAACCCCCTACGTTAAACTTACGTCTTCAAAATTACCTAAACAATTAATCCAAGAAAAACAATTGCACGGCGAGAAGAATCCAAAGTTCCACGATAAAGTTTTACATTTGCGCACTCGTAAGATTGAAGCCGAAAAAAGAGTGAAGGTGAATGTTGACATTAAAAAAAAAGTACAAGAAACCGAATCGAAAGTCAACATCAAAGAAGACAAGGTGACTGAAAAGAAAATTAATAAGGTGATTAAAGAAGTTGTAACTCCTGAAAAAAAGACAAAAGATTTGAAAAAACAAAAGGAGAACACAAAAATTGTGAAAAAGTGTGAAAGTCCAGTTAAAGAAACAGAAAAAAAGGTTGATACAAGCACAAATAAAGCAAAACCAAAACAGAAAGTTTCTAAACCCACTCATGAATCAAATACTATAAACAGCACCATAGATAAGGCCGATAAACTTAGAGTTATTATTGAAAAAGACATAGCCTCAAGTATATGTGAAAAAGATGTACCAAAAGTTGAGGTTTGTGATAAAGCTACAAAAAATAAAGTGGATAAAATAGATACAAAAAAACCGAAAGAAATAGTCTTACCTGTAGATGTAATTAAAGTAAAACCAGATATTCAAAAAGACGTAATAAGTGAGAAGATTCCTAACCCTGATATTTCTATACCGAAAGAAAATGCACCGAAAGACACAATCCTTATTAAAACTGAAATTAAAAAAGTAAATGAGATACATGCGCCAACGCTAGAACAAATAAAAAACACACCGGAACCGGTTAAGCAAGTAAAAGTTGCAGTTGAAATTTCAAAAGACTCGAACACAGACCAAGATTTAAAAAGGAAAGTTGAAACAAATGAGAACAACAGATACGATAAGACAGAAACAACAAAAAATGTGAGAAAAGGTAAAGTCGAAGGACCAAGAGTTTCCCAAAGACCTAGCCGAAAAACGAAAGAAGCTGCTGCTATCTACATGGAAATATTAGGACATAAACTTGTTAATGAAGAAGATTTTGACGATGATAATATTTCAATAGACAGTTTTCCAGAACTACCGAATGTTAGAAAAACTGAGCAAAGAGAAAATGAGCTAAAAGCAAAAGCGAAATCTAAAAATACTGAGATTAACGCCGAAAGTGTTAAATCAAACGAAAATCAAAGCAAAAAGTTTAAACTAGACAGTATTGAAAACGAATGTAAACCAACTAAAGTTGAAGAAACTAAAACTAAAGAAAACGAAAGTGTGCCGTTGAGAAATAAAGAAATTGAGGTTGTGTCGGATTCGGGCACGCTTGCTAAGAAAGTCGAAGATCCGTCGCCTACGAAGCGCGTAACTAGAGGATCTAAACTAGTCGTAAATACAACTTTTAGTGATTCAGAAGAATCTGTTCGTGATAATGTGGATAAAAAACTTCCCGTCAAAGTTAAGTCGAAAAAACCAACAGACTCGAATAAACTTAAAAAAAGAACAAATAAAACTTTGGAAAGTGAGAGCGAATCCGATGAATCCACTACTTCGAAAATCACCAAAGTAACTAAAACTAAGTCATTGAAAGCTGTTGATAATAGTTTTAGCGATTCTGATGAAGAACCCTTGTCGAAGTTAACTCAAAATAAGGTTGAAAAAATTGCTGAGTTAAAGGAAGAAAAACCAAAGAACGATGATGTCAAAAAAGACGAAAAACTTCCCGAGTCTGAATCGGCACTTACGTTGAGTGGAAAACCAAAACGCGAATGCACCAAAAGACCACAAAATTACCTTCCTTTGTTTTCATCGTCTGAAGACGAGGAAAAATACTTTCACGGTTTTCTTAAGAAACAAAACAAAATACCCAAAACTCAAACTAAATGCGTCGCAACTGCATCAGCCGATTTACTTTGTAAAGACGTTGATAAAAGGTTTGGTAAAGGAAAAGTCAATATGTCGACGGAACAGATCGAACAATGGCTAAAAGATAGCGCTTTAGCGGGTAGCTCCATTAAAAAAGAAAACGAAATATTTAAGTTCGAAGAAAAGCTAGGAAATTTTGATACAGATTTACTACAATTAAAACCCGAAAATAAAAAAATTGAGGCCGAGTCCTCAGAAAAAATTGAAACCATTGTTGAAAAGCCTACAAAACCTAAAGAAGAAGAAGCTGTTGCATCGGAAAGTTCAAAATGTGACCAATCGTCTGTGATACAAACAAACTTAAAACATATAGAACGTAAGATGATTTTTAGAAAGGAACGGAAAATTCCAATTCCAAAAGTAAACGCATTTTCGGCAAATAACGAAAGTAGTGTTTACGCATTTGAAGCTGATACCGAAGATGTTATAAGTACGCCTTTTAGAAGACCTTCGAGAAGACCTTCCAGTACTGGTACGTCAAGATCTGAAGATTCATCGAAGTATGAAGAACTATCAAAGAATGCAATGAAATTTCGATTTCCATCATTGAAACACGACTCTATAAAATCTAACAAACAAGAAGTATCACTTATGTTATCTGCCGATGAATCCAACACCAGCACGTCGATTGCGGTACAACTAGATTTAAACACCGCGGAAGTTGTAAATCCAGAAAATTCTATACAGGCAAATCGGGAAGATGGAGATCAACTGTTTTATATACCGTTACAACCGGGCAAACAATCTTCGCATGTTATTCAAGGAGTTGCGGTTAAGCTAGGTACTAAAGGGGCTAGCGGTCCGAATCAAAAAGTAGTAATGAGCGCTAAGTTAATAACTCACGCACCTACAGGTGTGCAAAAAGCCTTAGAAAAAACTACTTCAATGTACCCTCCGCCTATTAAAACTAAAACTTCAGAGGTTAAAATATATACCAAACACGCAAGCAACAGCAGATCTTCGGATCATTCCGAAGAAATAAAGTATAAAATCCCAAGTTCTCCAAGTGCAAGCTCTTCTTCGAGTACAAAAGTAACTAAACGACCACAAATCAAGACCCGTATACGTCCACTAGAATTTTGTAATCCAGTAGTGGCAAGCGAATTTCCTTCGGCTGATTCCTCGGCTATAATATTAGAGGCACCTACTTTTTATCCAAACGACAAAGAATTCCAAGATCCGCTGGAGTACATCGAAAAAATTCGTCCCCACGCGCAAAAATTCGGTATATGTCGCATCGTACCACCGAGTCATTTTAAACCAGAATGCAAAGTATCCGACGACATGAGGTTTACAGCCTATAATCAATACGTTCATAAGATGCTTCATCGATGGGGTCCTAATTTCAAAGAGCTTATGGCTATTAAAAAATATCTAGAAACTCAAAATATTGTATTAACTCATCCACCTTGGATTGGAGGTATGGAAATCGACCTACCACGGTTATATCAAATAGTGCAATCTCTAGGCGGTTTAAAAGAAGTCATAGAAAAGAAAAAGTGGCCAAAAGTATCTGAATTAATGAAAATTCCAAAATCGGCGCAAGATCGAGTGACCAAATTGGACGATATTTATTGCAAATACTTATTACCGTATGACACTTTGTCGCCAGCCGAGAGGGATAAATTATTCGACGAAGTCGAAACGGAATGGGCCAAGCGCGAATCGAAAGCGTTGCTTAAATCGCAACAAAAAATTGCCGTTAGAGACAACAATTCAAATAGTTCGGATGCAGAATCGAACGATGACGAATCGGATGAATGTATAGTCAAAGGCAGGAGTATGGCTTTAAATGCGTTTTATAGAATCGCGCGGAATACTATGAGCATGTGGTTTAAAACTACGGAACCTACTGCTCAAGAGGTGGAACAAGAATTTTGGAAGCACGTTACTACTAAACAAAGTCACATTTGCGTTCATTCCGGTTCGATCGATTCGGGAAGTTGGGGTTACGGTTTTGCCGTTTCCAAAAACAGTCCATTTGCCAGACATGCTTGGAATCTAAAAGTGTTGACCAACAACAGTGCGTCAGTTTTAAGATCGATGGGACCAGTAATGGGTGTGACTGTACCAACATTGCACGTTGGCATGGTATTTAGTGCCTGTTGTTGGTATCGTGACCCGCACAGCCTACCTTGGATAGAATACCTCCACACCGGTGGAAACAAGATCTGGTACGGAATCCCCGATAGTATGAGCGAATCATTTCGTTCCACACTAATAAAATTAGTACCGAATTATTGTCGAAACAAATCATTGTGGTTACCGTCAGATACCGCAATGGTACCTCCGAGTGTTTTAGTCGAAAATGGAGTTTCGCTATGTAGGACGATTCAAGAGCCCGGGCAATTTATAGTCGTTTTTCCAAAAGCGTTTACTTCCAGTTTATGCACGGGCTATGTAGTATCCGAAAGCGTTTATTTTGCACCATTAAGCTGGTTGAAATGTGCAGAAACCGTTTTTAGAGAATTACAGCATAATTGCGAACCTTCGATGTTTTCTTTAGAAAAATTAATTATTAGTGTGGCTACTGACGCAAGATCCAGCATAGACGTTTTAAGATTAATTATACCAATCATTGAATCACTATGTACTGCAGAAAAACTCAATATCAAGAAGTTAGAACAACTAGGTTTAGGCACTAAAGAAAGGGTGCCACTACCCGATGCTTCATTAAAGAAAAGAAAAAAATTCCAAACTGATAGTGGAGACTACGAATGCGAAGTATGTTGTAAAAATTTATTCATTTCTTGGGTGATGAATTCGCAAGAAGATACCGTGTACTGCTTGGAGCATACGATCAAATATTTAGAGGAGAAAGAATTAGATTCTTCAAATTGTAAGTTGATGTTCACATACAATAACGAAGAACTTGTCGGTTTAATAGAGAAAGTGAAAAATACGATTGAAACTAAGTTGCAGAAGAAGATTACAGGAAAAAATATTTAA
Protein Sequence
MVINRKEIKRKRKVVNSDSNLLNETPKRTKVHAQRKFAQGSNVSSPVITPVKEIEKQDKPRLDVLPEPQELLPMNRPHTEDFLTFLCFRGTSMLPPNLNFFNTATMDSRTPTLTIQKEPITVCPPIANINTRSSVSSSERPFIAFGVRKRADPILVSKHMDKKRRHALALQALRRKYQEQKMAKIRAVTISKLSEKVTSKSVVRTRSITKNETTKKSIPQKTRVKIISTKHVKVTTRSSIKTPLRANFTTPIRSTIQKKMCLRSFRGRFIQRELTIKKSKKKNTTKIIKKVKTKQTREISSEFSSDDDQPLKSFKVNKANKIVTKRAAVSKKPIELNFRVTRAHPVLVKSNDPTFIRKIHLTKSLHSKTPYVKLTSSKLPKQLIQEKQLHGEKNPKFHDKVLHLRTRKIEAEKRVKVNVDIKKKVQETESKVNIKEDKVTEKKINKVIKEVVTPEKKTKDLKKQKENTKIVKKCESPVKETEKKVDTSTNKAKPKQKVSKPTHESNTINSTIDKADKLRVIIEKDIASSICEKDVPKVEVCDKATKNKVDKIDTKKPKEIVLPVDVIKVKPDIQKDVISEKIPNPDISIPKENAPKDTILIKTEIKKVNEIHAPTLEQIKNTPEPVKQVKVAVEISKDSNTDQDLKRKVETNENNRYDKTETTKNVRKGKVEGPRVSQRPSRKTKEAAAIYMEILGHKLVNEEDFDDDNISIDSFPELPNVRKTEQRENELKAKAKSKNTEINAESVKSNENQSKKFKLDSIENECKPTKVEETKTKENESVPLRNKEIEVVSDSGTLAKKVEDPSPTKRVTRGSKLVVNTTFSDSEESVRDNVDKKLPVKVKSKKPTDSNKLKKRTNKTLESESESDESTTSKITKVTKTKSLKAVDNSFSDSDEEPLSKLTQNKVEKIAELKEEKPKNDDVKKDEKLPESESALTLSGKPKRECTKRPQNYLPLFSSSEDEEKYFHGFLKKQNKIPKTQTKCVATASADLLCKDVDKRFGKGKVNMSTEQIEQWLKDSALAGSSIKKENEIFKFEEKLGNFDTDLLQLKPENKKIEAESSEKIETIVEKPTKPKEEEAVASESSKCDQSSVIQTNLKHIERKMIFRKERKIPIPKVNAFSANNESSVYAFEADTEDVISTPFRRPSRRPSSTGTSRSEDSSKYEELSKNAMKFRFPSLKHDSIKSNKQEVSLMLSADESNTSTSIAVQLDLNTAEVVNPENSIQANREDGDQLFYIPLQPGKQSSHVIQGVAVKLGTKGASGPNQKVVMSAKLITHAPTGVQKALEKTTSMYPPPIKTKTSEVKIYTKHASNSRSSDHSEEIKYKIPSSPSASSSSSTKVTKRPQIKTRIRPLEFCNPVVASEFPSADSSAIILEAPTFYPNDKEFQDPLEYIEKIRPHAQKFGICRIVPPSHFKPECKVSDDMRFTAYNQYVHKMLHRWGPNFKELMAIKKYLETQNIVLTHPPWIGGMEIDLPRLYQIVQSLGGLKEVIEKKKWPKVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAERDKLFDEVETEWAKRESKALLKSQQKIAVRDNNSNSSDAESNDDESDECIVKGRSMALNAFYRIARNTMSMWFKTTEPTAQEVEQEFWKHVTTKQSHICVHSGSIDSGSWGYGFAVSKNSPFARHAWNLKVLTNNSASVLRSMGPVMGVTVPTLHVGMVFSACCWYRDPHSLPWIEYLHTGGNKIWYGIPDSMSESFRSTLIKLVPNYCRNKSLWLPSDTAMVPPSVLVENGVSLCRTIQEPGQFIVVFPKAFTSSLCTGYVVSESVYFAPLSWLKCAETVFRELQHNCEPSMFSLEKLIISVATDARSSIDVLRLIIPIIESLCTAEKLNIKKLEQLGLGTKERVPLPDASLKKRKKFQTDSGDYECEVCCKNLFISWVMNSQEDTVYCLEHTIKYLEEKELDSSNCKLMFTYNNEELVGLIEKVKNTIETKLQKKITGKNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00152043;
90% Identity
-
80% Identity
-