Basic Information

Gene Symbol
grh
Assembly
None
Location
Alat1.3:510796-646442[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-63 6.3e-60 200.4 0.1 29 221 706 893 693 895 0.94

Sequence Information

Coding Sequence
ATGACTCGTCGTAATTTAGAAGAACTGTCCGCCAATTCTTCTTCACCTATGGATTCAGATGGTACAATTATGTCTCCGCCTCCTCCCCAAGCGTCTCCGGCTGACCGTTCTCCTTTGCGAGACGCGCCCAGTTCACCCGCGATGTTAGCTACTATGACTCCAGTTAACGCGCTGGAGTTAAAAAAGGAGATGGAGGAAAAACGTGCCATGGGACATTCTCCCCTTTATGCTCAAGTTAAAACCGAAGTAATGTACGAAAAAGATGATGAATTGTACGCGCACGCAGTTCACGATAAAAACGACGCACCTATAGATCTCATTTACGAAGACGGCAACAAAACTGTTATTTATACGACGACGCCTCATCAGAAAGGCTTGGAGATGTACTCCTCGGATAATTCGGGAGAGATAACTATTAATAATATAAACGCTCATCATATTCAGGGACAACAAATCACTGATGTATTAATTGACGGAAATTCGGGTGCCATGGTTACAACGGGAGACGGATCTGGTAGTCCTCCGGGAACGGTTTCTGTTGTTTTACAAGGAAACGGTCAAGGGTTACTGCAATATCCACAAAGTCAAGTACCAGGAACGACGGTGCTGGTCGTCTCAGAACTCGTCGACGATATGGGATTACCCCTCGTGGGAATAAGAAAACGTAAGGACAGTTTGGAGTCCAGTGGCAGCACTCACACGGGAGGTGCGGGTGAATTGTCAGCGGCGGCGCCCCGGGGTATGGCCGAACTGCCCGAGGGGGGCGCCCCTCCAGAAGACCAACATACCTGGCGAACTACTAGTTACGAACACCCTCTGACTGCAGCAACCACCGCTATGCTTAATATAGGTGGCGGTGCCGAAGATCAGGCTACCACTATGGGGCTCATCTACGAATATTATAAATTACCTGCCCTTCCCGATTCAAAGGATAAACTCGGAGATATTTGGTCGACGAGTTCCCAGGCTGGTGGAATCCTGACATCGCAGTTAAAGGCGGCCAATGGGCTAGTGAGTGGGGCTGGCTTAGAGCTAACTAACCCGCCTCTAAGCACCGCAAATCAACTGAGTACCCAAGACATACAAGGTTTATTTATAAACCAACACGTTGGTTACGCACAGCCCGCGGCCTCCGGTAGCCAAAGTCTGCACATAGTGAAGCGCGAACCAGAAGATTTAAGCCACAATCGAAAATTAGACGCAAATTCTCCAGGTTTGGATGGATCGATAATCGTTAGCAAACAACCGCGACACAAGGTTGTGCTGGTTTCCTCTGTAAGCGGCCAGCACGGGGATTTGGTGGTGGACGTCAACTCCATTAAAGACGAAGGACGACTTAATTCTCCGCAACACGGATCTCGTTCAGTAAATGGAACACCGACTTCTTCGCACAGCAGTTTATTAGCCGATGGTTCCAACGCGGGACCTATAGAATTCGTGTCTTCGGATGGCCTCAAACCGGCAATGTATAGCACTCAAATTTTTGCGACTATGAATAATACTCATAGTGGTAGTGGAACACCATCTCCGATACCTTATAGTGATCACGTAACTCAATATACTCAAAATGCTATTAGCGGTGGTTACTCGAGTTCGGCGGTTAGAGCGTCTAGCTCCGGCGCATTTACAGTCGCCGATCCGTATTATCGCGAATATTTCACCACCGTCGCCTCAGGAGCTGGAACTCCAGAACCAATCTATTCGAGTCAATTACGTCAAAATCAAATTAACTACGGCGAGGAAGCGGTTGGTGGCGGAGCAACGGCTAGTTTTGTCGAACGTTATGTCCGCCAATCTAGCGCTTATCACGGTAAGGGCGTAATAGCCGCCGCTACCGCCGCCGGCCTCACCGTGGATTTACCAAGTCCCGATAGTGGAATTGGTGCAGATGCCATCACACCCCGCGACCAGAACACGATGCAACAGTCTTTCGATTACACGGAGTTGTGCCAAACGAATCCTTCTCTTTTGGACCCACTGTCTATGAGTCAACGTGGTGTCGTCACTACTGCCCAATCTGGTGCTCAAACTGGCAGCAGAAGTCGTCCTTGGCACGATTTTGGACGCCAAAACGATGCCGACAAAATACAAATACCTAAAATATTTTTGCCATACGGTTTCAAATACTTCTTAGAAACGCCAATATCGACATCGCAAAGGCGCGAAGACGATCGTATTACCTACATAAATAAAGGACAATTTTATGGAATAACCTTAGAATATATTCCAGATCCCGACAAACAGCTTAAATCGCAAACCGTCAAGAGTATCGTGATGCTGATGTTTAGAGAAGAAAAGAGCCCGGACGACGAAATAAAAGCGTGGCAGTTTTGGCACGGACGACAGCATTCAGTTAAACAAAGAATTTTGGATGCCGATACGAAAAATAGCGTGGGCTTGGTAGGGTGCATCGAAGAAGTTGCTCATAACGCTATTGCAGTTTATTGGAATCCTTTGGATAGCCCCGCAAAGATAAACGTTGCTGTACAATGCTTAAGCACCGATTTCAGTAGTCAAAAAGGGGTAAAAGGTCTTCCCTTACATCTACAAATCGATACTTACGAAGACCATCGAGAGCCGACCGTCAATCATCGAGCTTATTGTCAAATCAAAGTCTTTTGTGATAAAGGAGCGGAACGAAAAACTCGCGACGAAGAACGAAGAGCGGCTAAAAGAAAAATGACTGCGACCGGACGTAAAAAACTCGACGAACTTTATCACCCGGTTTGCGATCGATCCGAGTTCTATTCTATGAGCGATCTAACTAAACCTCCAGTGCTATTTACGCCAGCTGAAGATATCGACAAGCTTACGTCGATGGAGCTTCAAGGTTTTTACCCGCACGACACGGATAGTTCGTTAAGCGGTCCAGCCGATCACGTAAAATCGGGATCTCCCTTTTTATTACATACAGCTGGTAAACCGCCAACCACTCCGACTTTAAAATTTCACAATCATTTTCCTCCGGACGCCGACAAAAAAGATAATCTCCTGGACAACAGTTTAACTACAGACGGCGCGTTATTTTCTCCTCCTCTCAAACGTGCCAAAGTACTTGGTGGCGTATCTGGATCTGCGGGACCTCCACCGCTGAACGAACGAGTCATGTTATATGTACGCCAAGAATCCGAGGATGTATATACGCCGTTACACGTCGTTCCACCAACAACAGTTGGACTACTAAACGCTATTGAGAATAAGTACAAAATTTCTGCTTCCAGCATAAATAACTTGTATCGCAAAAACAAAAAAGGCATTACAGCCAAGATTGATGACGATATGGTAGCCTATTACTGCAACGAAGATCTTTTTCTATTAGAATTAAAAGCGGTCGACGAAGACCTCTTTGATATCACYTTTATCGAACTGATGGATCATTAA
Protein Sequence
MTRRNLEELSANSSSPMDSDGTIMSPPPPQASPADRSPLRDAPSSPAMLATMTPVNALELKKEMEEKRAMGHSPLYAQVKTEVMYEKDDELYAHAVHDKNDAPIDLIYEDGNKTVIYTTTPHQKGLEMYSSDNSGEITINNINAHHIQGQQITDVLIDGNSGAMVTTGDGSGSPPGTVSVVLQGNGQGLLQYPQSQVPGTTVLVVSELVDDMGLPLVGIRKRKDSLESSGSTHTGGAGELSAAAPRGMAELPEGGAPPEDQHTWRTTSYEHPLTAATTAMLNIGGGAEDQATTMGLIYEYYKLPALPDSKDKLGDIWSTSSQAGGILTSQLKAANGLVSGAGLELTNPPLSTANQLSTQDIQGLFINQHVGYAQPAASGSQSLHIVKREPEDLSHNRKLDANSPGLDGSIIVSKQPRHKVVLVSSVSGQHGDLVVDVNSIKDEGRLNSPQHGSRSVNGTPTSSHSSLLADGSNAGPIEFVSSDGLKPAMYSTQIFATMNNTHSGSGTPSPIPYSDHVTQYTQNAISGGYSSSAVRASSSGAFTVADPYYREYFTTVASGAGTPEPIYSSQLRQNQINYGEEAVGGGATASFVERYVRQSSAYHGKGVIAAATAAGLTVDLPSPDSGIGADAITPRDQNTMQQSFDYTELCQTNPSLLDPLSMSQRGVVTTAQSGAQTGSRSRPWHDFGRQNDADKIQIPKIFLPYGFKYFLETPISTSQRREDDRITYINKGQFYGITLEYIPDPDKQLKSQTVKSIVMLMFREEKSPDDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLDSPAKINVAVQCLSTDFSSQKGVKGLPLHLQIDTYEDHREPTVNHRAYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVCDRSEFYSMSDLTKPPVLFTPAEDIDKLTSMELQGFYPHDTDSSLSGPADHVKSGSPFLLHTAGKPPTTPTLKFHNHFPPDADKKDNLLDNSLTTDGALFSPPLKRAKVLGGVSGSAGPPPLNERVMLYVRQESEDVYTPLHVVPPTTVGLLNAIENKYKISASSINNLYRKNKKGITAKIDDDMVAYYCNEDLFLLELKAVDEDLFDITFIELMDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00003528;
90% Identity
iTF_00003528;
80% Identity
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