Aruf013286.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- -
- Assembly
- GCA_902196195.1
- Location
- CABIKL010000541.1:16492-17906[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.0013 7.8 7.1 0.1 16 35 11 30 6 31 0.81 2 5 0.00061 3.6 8.2 0.1 15 34 49 68 48 70 0.85 3 5 0.0026 15 6.2 0.0 19 34 81 96 76 98 0.85 4 5 0.012 72 4.0 0.0 19 31 109 121 103 125 0.80 5 5 0.031 1.8e+02 2.7 0.0 19 30 137 148 132 153 0.78
Sequence Information
- Coding Sequence
- CTGCTGCGGGCGCACCAGCAGGTGCACTCCGACGACAACAAGAAGCACGCGTGCGAGATTTGCGGCAAGGCCTTCCGGAAGACGCACACCCTGGCCATGCAGTGGCACGACATGGACGGCCCGCCCGGGCAGAGCGCGCCGAAGGGCCCCGTCGTCAAGCCCTTCGTGTGCGAGAAGTGCGGCAAGGCGTTCAGGCTCAAGCAGAACCTCACCGCGCACATGATGgtgcacacgggcgagaagccgcaCGTCTGCACCGTGTGCGGCAAGGCCTTCCGGCAGAACGGAGCGCTCGTCGCCCACAAGCGCgtgcacacgggcgagaagcccttCCTCTGCAAGATCTGCGGCAAGGCTTTCAGGTTTAAGGCTGATGTAAAAGCCCACGAAATGCTGCACTCCAAGGAGAAGCCTTTCGTATGCGAGCTTTGTGGCATGAGCTTCCCTAAGGCATCCAACTTACGGAGGCACAAGATGATCCACACCGAAGTGAAGCCGCACTCCTGTGAGAACGGCTAA
- Protein Sequence
- LLRAHQQVHSDDNKKHACEICGKAFRKTHTLAMQWHDMDGPPGQSAPKGPVVKPFVCEKCGKAFRLKQNLTAHMMVHTGEKPHVCTVCGKAFRQNGALVAHKRVHTGEKPFLCKICGKAFRFKADVKAHEMLHSKEKPFVCELCGMSFPKASNLRRHKMIHTEVKPHSCENG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00151526;
- 90% Identity
- iTF_00151526;
- 80% Identity
- iTF_00151526;