Aruf010085.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- Iswi
- Assembly
- GCA_902196195.1
- Location
- CABIKL010008111.1:4273-6082[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-07 0.0067 17.4 0.0 3 41 258 297 257 297 0.96 2 2 0.00059 4.1 8.5 0.0 3 21 360 379 358 382 0.90
Sequence Information
- Coding Sequence
- ATGGATCGAGCTCATCGTATTGGACAGAAGAAACAAGTCAGGGTTTTCCGTATGATAACTGAGAATACTGTTGAAGAGAAAATAGTAGAAAGGGCAGAGGTGAAACTTCGACTTGACAAACTTGTCATTCAGCAGGGCCGACTTGTTGACAACAAAGCCAGTGCTCTCAACAAAGATGAGATGTTGAATATGATCAGACATGGTGCTAATCAAGTGTTTGCATCTAAGGATTCAGCCATTACAGATGAAGACATAGATGTCATTCTTGAGAAAGGAGAGGCTAAGACACAAGAATTGAACCAGAAGTTGTCTGAGATGGGCGAATCTTCCCTCCGCAACTTTACTGTTGATACACCTACAGACTCAGTGTACAAGTTCGAAGGAGAAGATTACAGGGAAAAACAAAAAGTCCTTGGCATTGGAAACTGGATTGAACCACCCAAGCGTGAGAGAAAAGCTAACTATGCTGTTGATGCATACTTCAGAGAAGCCCTCAGAGTTTCTGAACCTAAGGCTCCTAAAGCTCCTCGTCCTCCTAAGCAACCAATTGTTCAGGACTTCCAGTTCTTCCCACCTCGACTTTTTGAACTACTTGACCAAGAGATTTATCATTTCCGCAAGAGTTTAGGGTACAAGGTTCCCAAAAATCCTGAACTTGGTCCTGATGCTGCTCGTATTCAGAAAGAGGAACAGAGGAAAATTGATGAGGCCCAGCTTCTCACTGATGAAGAGATTGCCGAAAAGGAGAGTTTACTAACACAAGGATTCACCAACTGGACGAAACGTGATTTCAACCAGTTCATCAAGGCAAATGAAAAGTATGGTCGAGATGATATTGAGAACATAGCTCGTGATGTAGAAGGAAAGACTCCTGAAGAGGTCATGGAATACAGTACTGTCTTCTGGGAACGCTGTCATGAGCTTCAAGACATTGACAGGATAATGGGCCAGATTGAAAGAGGAGAAGCGAAGATTCAGCGCCGTGCAGGCATTAAGAAAGCTTTGGATGCTAAGATGGCTCGTTACAGAGCTCCATTCCATCAGTTACGCATATCTTACGGTACCAACAAAGGCAAGAATTATACAGAAGAAGAAGACCGTTTCCTGGTGTGCATGCTTCACAAACTTGGATTTGATAAGGAAAATGTGTATGAAGAATTGAGAGCAGCTGTGAGGTCTGCCCCACAGTTCAGATTTGATTGGTTTATCAAATCTCGTACAGCTATGGAGCTGCAAAGAAGATGCAACACTCTCATTACCCTAATTGAACGAGAAAATCAAGAGctggaagagaaagaaaggcAAGAGAAGAAGAAGCGTGGCCCTCGCAGTGGTGGTCCTGCAGGAGGCAGTAACACACCTTCTCAAAACAGTCAATCGGGGACTTCAACACCTGCTCCCAGTACGCCAAGTGGTAACTCTGGTACGCCAAATGCTGCTAAACAGAGTCAGAAGCGCAAAGGAGACTCAATGGCTCCTAGTTCTGTTAGCTCTACTCCAGACTCCAAAatcaagaagaggaagaagtga
- Protein Sequence
- MDRAHRIGQKKQVRVFRMITENTVEEKIVERAEVKLRLDKLVIQQGRLVDNKASALNKDEMLNMIRHGANQVFASKDSAITDEDIDVILEKGEAKTQELNQKLSEMGESSLRNFTVDTPTDSVYKFEGEDYREKQKVLGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYHFRKSLGYKVPKNPELGPDAARIQKEEQRKIDEAQLLTDEEIAEKESLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIARDVEGKTPEEVMEYSTVFWERCHELQDIDRIMGQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRISYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRSAPQFRFDWFIKSRTAMELQRRCNTLITLIERENQELEEKERQEKKKRGPRSGGPAGGSNTPSQNSQSGTSTPAPSTPSGNSGTPNAAKQSQKRKGDSMAPSSVSSTPDSKIKKRKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00955609; iTF_00434836;
- 90% Identity
- -
- 80% Identity
- -