Aruf014194.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_902196195.1
- Location
- CABIKL010000087.1:11774-13900[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-14 7.4e-11 42.9 0.1 3 44 81 122 79 124 0.95 2 3 2 1.4e+04 -2.8 0.3 5 12 269 276 269 276 0.87 3 3 2.1 1.5e+04 -2.9 0.1 8 18 398 408 396 409 0.84
Sequence Information
- Coding Sequence
- ATGGGTCCACCTCCAACATCTCACTTCCATGTCTTGGCTGATACACCTAGTGGTCTCCAACCTGTAAATCCACCCAAAACACCCCAGCCCTCTGCAGCTAAAACTCTTCTTGACATGGATAAAAAGGATATTCCTAAAAAGTCTGATGCTGATCCTGGGACCATCTTTGGCCTTAAGCTTGATCAGTATGCTCGTAAGCCTGCTGCCTTGCGTAATAAGACTGCTGCAAGTATGACCCGTGACTGGACGTACCAAGAGACCCTTTTGCTTCTTGAGGGTCTTGAGCTGTACAAGGATGATTGGAACAAAGTCTGCGAGCATGTTGGCAGCCGCACTCAAGATGAATGCATATTGCACTTCTTGCGCTTGCCTATTGAGGATCCGTACCTTGAAGACCATGAAGCTGGAGGTGCATTGGGTCCTCTTGCGTACCAGCCTATTCCCTTCAGCAAAGCTGGAAACCCGATAATGTCCACGGTTGCATTCTTAGCTTCAGTTGTTGATCCTCGTGTAGCTGCTTCAGCTGCTAAAGCTGCAATGGAGGAGTTCGCCAATATAAAGGATGAAGTACCTGCCAATGTGATTGAGCAGCACCTCAAGAGTGTGGAGGCAGCAGTTGCTGAAGGCAAATGTGATCCCGTTGCTGGTCTTCTTATGACTGGTATTGCTGGAACCGAGCcagaaaaggaggaggaggacaaagacaagaaagaaagtgaaaaacAGAAGGatgacaaagaaaagaaagatacaGAAGAAGGTGAAAAAGCAGAAGTGAAGGATAAGGATAAAGAAGAGAAGGAGAGTAAAGAGGAAGATGAGAAGATTGACAAAGAAGACAAGgaatcaaaagaaaaagaagctgaAACTGACAAAAGTGTCAAGGGAGCCAAAGATGAGAAAAATAAGGAAGCTAAAGACACCAAAAAGGACGAAAAGGACAAGTCCACAGAAAAAGATGTGGATGCTGAAAAGAAGGATTCTGAGAAGGACTCTGAGAAAGAGAAGGATGAGGCAATGGATGTAGACAAGAAGGAaggtgaagatgatgatgagaaGAAGGACAAGGATGAAGAGAAAACTAAGGAGGTAGCAGCCAAACCTAGAGTTGTGAAAGATGCTCAGCTCCAGTCTGCAGCGGCAGCCGCtctagcagctgcagctgtgaaAGCGAAGCATCTAGCCGCagtagaggagaggaagatTAAATCTCTTGTCGCATTGCTTGTGGAGACACAAATGAAAAAGTTAGAAATTAAACTGCGCCACTTTGAGGAGCTGGAGAGCACCATGGAACGTGAGCGGGAGGGCCTGGAGTACCAGCGCCAGCAGCTCATCACAGAAAGGCAGCAGTTCCACCTCGAACAACTGAAGGCAGCTGAATTCAGAGCAAGGCAACAAGCTCAGCAGAGGCTCCAGATGGAACAGGAACAAGGCCAAAAtattcctcctccttctccccaAGCGCAGCAACAGCCAGCGCATACTCAAATGCCACCTCACATCCAGCCGGCGCACCACCCACAACAACCCTCACCCCAAGCCACGTCAGCCTGA
- Protein Sequence
- MGPPPTSHFHVLADTPSGLQPVNPPKTPQPSAAKTLLDMDKKDIPKKSDADPGTIFGLKLDQYARKPAALRNKTAASMTRDWTYQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPANVIEQHLKSVEAAVAEGKCDPVAGLLMTGIAGTEPEKEEEDKDKKESEKQKDDKEKKDTEEGEKAEVKDKDKEEKESKEEDEKIDKEDKESKEKEAETDKSVKGAKDEKNKEAKDTKKDEKDKSTEKDVDAEKKDSEKDSEKEKDEAMDVDKKEGEDDDEKKDKDEEKTKEVAAKPRVVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELESTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAQQRLQMEQEQGQNIPPPSPQAQQQPAHTQMPPHIQPAHHPQQPSPQATSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -