Aruf020427.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- Ncor2
- Assembly
- GCA_902196195.1
- Location
- CABIKL010015355.1:1-4896[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-17 8.4e-14 52.3 0.6 3 46 143 187 141 187 0.97
Sequence Information
- Coding Sequence
- AAGCCGGTGGGCACGCAGCCCTGCATCCTGTGCAAGCAGCAGGTGGACGGCGTGACGCAGTCCCGGCTGCTGCCGCGCTCCCAGGCGGCGCAGTACGGGCTGCgcgaggaggaggtggcggcgggggcgcgcgTGTGCAACCCGTGCCGCTGCAAGGCGGTGCGCTCGCGGTACGTGCACTGCCCGCTGCCCTCCTGCCCCAACGCCAAGGGCCGCGTCAAGCGCGTCCGCCCCTTCCCGGCCAAGTGGGCCGAGCTGTCGGCCGAGCAGCGGGACCCCATCGTCACCGAGTTCCAGATCCCGCCCGGCGTGACCaaggcctgctcggcctgcttcAACCGCATCGCGCGCCGCATCAACCCGTCCGAGGAGAACAGCGGCGAGGCGTCGCCCAGCCCGTCGGGCGCGCCGTCCggcagctcgctgcgctggaCGGAGGACGAGACGGAGCTGCTCAAGAAGGCCCTGCGCGAGCACGGCACCAACTGGCAGCGCGTGTCCGAGGCCGTGGGCGGCACCAAGACCCACCACCAGTGCAAGAACTTCTACTTCAACTACCGCAAGAAGATCGGGCTGGACGCGCTCGTGCAGGAGTACCACAAGAACCAcctgggcgaggagaggaagccGGCGCTCACGGACGAGGAGGAGAGCGGCTCGAGCACGTCCTCGTGCGACGAGGTGCCCCCGGCCACGGGCCCCATCGACAGCGACACAGCGAGCGCCGCCTCCCCAAACGCGGCGGCCAAGGCGGCGGGCAccgcgggggcggctccgggcgcgggggcggctccgggcgcggTGCAGGCGAGCTCGGCGGCGAGCTCCGCGGTCAGCTCCGGGACGGCGCTAGGCGCAGCTCCCGGGACGGTTGACGCGGACAATGCGAGCAGCAGCCCCGGCCCCTTGGCGACGTCCTCGAACACGCTCGCGCCTTCCTCCACCACCACGACGAGCACCTCCACGACGACCAGCAGCACCGCGCCCTCGCCCAACGGCAACGCCGCGCCCGCCTCCACCACCAGCCTGACGGCGGGCGTGCAGACCCAGAGCACCTCGCAGGCACGCACCACGAGCGAGTCCTCGGACCAGCTCAGGCCCGCCAACAAGGAGGACTACGACAGCTCCGCGACGGAGACCGCGgacgaggggcagggaggggctgaACCGCCGCCCCCTAGCAGCCAcgcgcagggcgcgcagggcggagcgcagggcgcgcagggcggcgcggcgcaggccaACGGGCCGTCGTCCCCGCGCGTCACCACGGTCAAGGACCTGATGCTGAGCGTGATCGAGGTGTCGCTCATGAAGACCCAGAGCGCGCCGAGCGACAActcggccgccgccagcgccccgcccaccatTTCCTCCATCCTCGGCTCCGAGAGCAGCTTCGTCGGCCGCGACTTccgacccgcccctcccgccgcggAGAAGGTGGTGACGAACTCGCACCACGCCGAGCCCCCCAAGGATGCCGCCAACGCACACCATCCTGACCTGCCGAAGGAAGGTCTTGTGGTGCTGCAGGTGAGCTGA
- Protein Sequence
- KPVGTQPCILCKQQVDGVTQSRLLPRSQAAQYGLREEEVAAGARVCNPCRCKAVRSRYVHCPLPSCPNAKGRVKRVRPFPAKWAELSAEQRDPIVTEFQIPPGVTKACSACFNRIARRINPSEENSGEASPSPSGAPSGSSLRWTEDETELLKKALREHGTNWQRVSEAVGGTKTHHQCKNFYFNYRKKIGLDALVQEYHKNHLGEERKPALTDEEESGSSTSSCDEVPPATGPIDSDTASAASPNAAAKAAGTAGAAPGAGAAPGAVQASSAASSAVSSGTALGAAPGTVDADNASSSPGPLATSSNTLAPSSTTTTSTSTTTSSTAPSPNGNAAPASTTSLTAGVQTQSTSQARTTSESSDQLRPANKEDYDSSATETADEGQGGAEPPPPSSHAQGAQGGAQGAQGGAAQANGPSSPRVTTVKDLMLSVIEVSLMKTQSAPSDNSAAASAPPTISSILGSESSFVGRDFRPAPPAAEKVVTNSHHAEPPKDAANAHHPDLPKEGLVVLQVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -