Aruf023911.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- Myb_1
- Assembly
- GCA_902196195.1
- Location
- CABIKL010001172.1:7270-14654[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.037 2.6e+02 2.8 0.6 1 10 103 112 103 113 0.88 2 4 1.1e-12 7.6e-09 36.5 0.0 9 45 122 158 122 159 0.95 3 4 2.1e-21 1.5e-17 64.4 2.1 1 46 165 211 165 211 0.98 4 4 4.2e-22 2.9e-18 66.6 0.3 1 44 217 260 217 262 0.96
Sequence Information
- Coding Sequence
- ctgcgaCTACTCGTTCCAGTCACTGCGCCGTGCCCCTCGGCCAACcctcgcctcccgccccgccccgccccgcgacatccggtgcagcgctgcgccacgccgtaCCAACCCTgtgtctgccccgcgccccgcgccccgctctccgaggacaggacaggCTCTCGGTCCGGCTACGACAGCTCCTCGAGCGAGGACCAGTCCGATGAGTCCGGGTCCGGCGCCGCGGACGAGTCGACGAGCACTTACGGCCCCAACATGTCCGCCTGGATCTCAGAGGGCGGCGGCCAGAGCAGGAAGGCCGTCAACAAGGGCCGCTGGACCAAAGAGGAGGCCGAGCGGGATTCTGCCGTGCAGGTGCTCGGGGATTCCCTCCTGAAGTCGTTGGTGGATGACCTGAAGGAGAACTGGGACGCCATCGCCAAGCACTTCCCGGACCGCACTGACGTCCAGTGCCAGCAGAGGTGGCTCAAGGTGGTGAACCCGGCGCTCGTCAAGGGGCCCTGGACCAAAGAGGAGGACGAgaaggtgctggagctggtggtgaGGTACGGCCCCAAGAAGTGGACGCTGATCGCCCGCCACCTCAAGGGCCGCATCGGCAAGCAGTGCAGGGAGCGCTGGCACAACCACCTCAACCCCAAGATCAAGAAGACGGCCTGGACCGAGGAGGAGGACCGCATCATCTACCAGGCGCACGTCCAGTACGGCAACCAGTGGGCGCGCATCGCCAAGCTGCTGCCCGGCCGCACGGACAACGCCATCAAGAACCACTGGAACTCCACGATGCGGCGCAAGTACGAGgccgagctgcgcggcgcggcggtgggccgcggccggggcaggggggcgggccgagggtcGAGGTGTGCccccgccgcgcagctgcagcagtgcgccgcccccgccgcccccgcccccgcagccccggccccggcccccgagCAGCCCGTCCCCACCGCCCTCATCAAGGTCTCCTACAAGAactccttcccctccactgccgcCCCGGCGGGTCGTGAGAGTGCGATGTCCCACAGCCTCAGTGACTATGGCATACACGTGTACGAGAGCTCGGAATGGTCCTCTCCCGAAGTGTACGACCAGCAGCTTAGTCACGGGTCAGCCGccagtcccgcccccgccgccgcccccctgcccagccccctcCATACACAGCTGTTGACACCTCAGCCCCAGCAGCGAGCATCACAAGCTTTTGGTACAAAGATCGAGGAACCAGACCCATTCTCACCTTTCAAGTATCTTAGTATGCAATCAAGTCCCTCTGATGAAGGTTTCAATGATCGTGAGAGCAGCATGAAGATTTCCCCAAAGAAAGAGCCCATGAGTACATATGGACAGATGCAATTGCTTGCTGGGCCCTTCTGTACATCACCTCCAGAGTTTAAGCACGACCCGTTAACATTCACTCATCCACCGGATTCTGAGTTGTCATCTGATTATGCGCTTCCTTCACCGCCTGGTCATTCGATGCAAAGTAGTGGTCTTGGGGTCTCTGTAGGAACTCCTGATAAGCACGCTACTCCTATAAAACAGGTGCCATTCAGCCCATCACAGTTCCTGAATACGCCGAACCTTATGGAGATTTCATTAACTGGAACTCCAGTGCGCCGGAATCTAGTGGCTGCCCAGTCCACGCCGTTCAATCGAGACAGTGACCGAGACAGGGAGGGCAGTCCCGGCCCCCTGTGCACGCCAGAGGCTCAGTTGCATCAGGcagcgcgacagagacagaggagcGCCGCCGCTGAGGAGGCAGCCAGCAACGCAGAGGCAGCGTCTGAACCCAGGAGCAACGACTCGACCCCTAGCAGGAAGACTAGAGCAACGCTGCCTAGGACACCAACCCCCTTCAAGGATGCTCTAGCAAAGCTTGAGAAGAAGAATGGAGTTGTCAGGAATTTGCCACAGACACCTACAAGATTAGAAGATATTGATGAGCTGATGAAAAAGGAGCAGCCTGACTTGTCTGATTCCCAGTATGAGACTGATACCACCAGTATGATGAATTACACCACATATCAGGATTCTCTGCAGGATAGTGGCTATGTAGGGACAACAAAGAGGCGTGGTGTTACACCCATTGGTAAAGAAAATGtcccgaacaaaaaggttaggAAAGCTCTTGCGCCATCCTGGAGTACTCCAGGGAATATTAGTGTTCCAGGAGTAACCGACCCATCCTTTGTTGTGGAGTCACCTAGTAAATCCCTAGTAGAAGACCGCTCTGCATCATCGTACTCTCCATCTTTTGTTGTGGAGACACCTAGCAAGTCATTGGTTGGGGATCGCTCTGTTCTGTTTTCTCCTCCATCAATTATGATAGACCTTGATGAAGTTCTGGCAGTTCCAGTAAATGATCCACCATCTCCTAATGCCAAGAGTGGGAATCAGATTCCATCTCTGCCCACAACATCAACCAAACAATCCGTCGTGAAACGGATCCAATTTGGAGATACATCCAGAGATCTTAGAGTGCCAAAGCTTGATGTTCGATGGGAGATGGTTGCTTGCGGGAAGACATTAGACCAACTGGAGTTAACAGAACAAGCTCACAAGTATCTGAATCAAACTGCTCTGAAACCTCGCTCCCTGCATCTCTGA
- Protein Sequence
- LRLLVPVTAPCPSANPRLPPRPAPRHPVQRCATPYQPCVCPAPRAPLSEDRTGSRSGYDSSSSEDQSDESGSGAADESTSTYGPNMSAWISEGGGQSRKAVNKGRWTKEEAERDSAVQVLGDSLLKSLVDDLKENWDAIAKHFPDRTDVQCQQRWLKVVNPALVKGPWTKEEDEKVLELVVRYGPKKWTLIARHLKGRIGKQCRERWHNHLNPKIKKTAWTEEEDRIIYQAHVQYGNQWARIAKLLPGRTDNAIKNHWNSTMRRKYEAELRGAAVGRGRGRGAGRGSRCAPAAQLQQCAAPAAPAPAAPAPAPEQPVPTALIKVSYKNSFPSTAAPAGRESAMSHSLSDYGIHVYESSEWSSPEVYDQQLSHGSAASPAPAAAPLPSPLHTQLLTPQPQQRASQAFGTKIEEPDPFSPFKYLSMQSSPSDEGFNDRESSMKISPKKEPMSTYGQMQLLAGPFCTSPPEFKHDPLTFTHPPDSELSSDYALPSPPGHSMQSSGLGVSVGTPDKHATPIKQVPFSPSQFLNTPNLMEISLTGTPVRRNLVAAQSTPFNRDSDRDREGSPGPLCTPEAQLHQAARQRQRSAAAEEAASNAEAASEPRSNDSTPSRKTRATLPRTPTPFKDALAKLEKKNGVVRNLPQTPTRLEDIDELMKKEQPDLSDSQYETDTTSMMNYTTYQDSLQDSGYVGTTKRRGVTPIGKENVPNKKVRKALAPSWSTPGNISVPGVTDPSFVVESPSKSLVEDRSASSYSPSFVVETPSKSLVGDRSVLFSPPSIMIDLDEVLAVPVNDPPSPNAKSGNQIPSLPTTSTKQSVVKRIQFGDTSRDLRVPKLDVRWEMVACGKTLDQLELTEQAHKYLNQTALKPRSLHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -