Aruf023673.1
Basic Information
- Insect
- Aptinothrips rufus
- Gene Symbol
- kn_2
- Assembly
- GCA_902196195.1
- Location
- CABIKL010024566.1:1-2992[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-94 1.7e-90 304.9 0.1 246 386 63 203 50 206 0.96 2 2 5.8e-09 4.1e-05 23.0 11.3 422 508 211 299 203 307 0.63
Sequence Information
- Coding Sequence
- ATGAGGGTggcggcgggcagagcaggccgtgcaggtcctcccgccccgccgcaccacgccacgccacgccccgccccgccccaccacgccacgcctcgccttgacacccgctgcggggcggggcggcccatgCGGCATGTCCCTGAGCTGGAGGCCGCAGTAGTGCGCTGTGCCGGCATCTACCCTCCTCTCCCGATGGCCACCCCTTGCATCAAGGCCATCAGCCCCTCGGAGGGGTGGACCAGCGGCGGGGCCACGGTCATCATCATCGGCGAGAACTTCTTCGACGGCCTGCAGGTGGTGTTCGGCACCATGCTGGTCTGGAGCGAGCTCATCACGTCGCACGCCATCCGAGTCCAGACGCCGCCTAGAAACATTCCGGGCGTCGTCGAAGTCACCTTGTCCTACAAGTCCAAGCAGTTCTGTAAAGGAGCGCCGGGGAGGTTCGTCTACGTCTCATTAACTGAGCCCACCATTGATTACGGCTTCCAGAGGCTACAAAAGTTGATACCCCGGCACCCAGGGGACCCTGAAAAGCTGCCAAAAGAGATCATCTTGAAGCGAGCCGCGGACCTGGCCGAGGCGCTGTACAGCATGCCGCGCAACTCGAGCGTCACGCCGACCAATGGGATGAGCGCGGGCTTCAACTCGTACTCTGGTCAGCTGGCGGTCAGTGTGCAGGACGCGGGCCGCGCGCCTTACGAGGACGACGAGTACGGAGGCGGCCGAGCGCAGAGTAGCAGCGTCAGCCCCCGCGGCTACGTCTCATCGGCCACCTCCACGCCGCAGTCCACGGGGGGCGGCTccggcagtgggggcgggggcgggggcggctcgttCCCCGCCGCGTCCACGCCGCAGCTGACCAACCTGTCGGCGGCCGGGGGACTGTTCACCTCCTCGTCCAGTGAGATCATGTCCA
- Protein Sequence
- MRVAAGRAGRAGPPAPPHHATPRPAPPHHATPRLDTRCGAGRPMRHVPELEAAVVRCAGIYPPLPMATPCIKAISPSEGWTSGGATVIIIGENFFDGLQVVFGTMLVWSELITSHAIRVQTPPRNIPGVVEVTLSYKSKQFCKGAPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNSSVTPTNGMSAGFNSYSGQLAVSVQDAGRAPYEDDEYGGGRAQSSSVSPRGYVSSATSTPQSTGGGSGSGGGGGGGSFPAASTPQLTNLSAAGGLFTSSSSEIMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -