Basic Information

Insect: Aproaerema taeniolella
Gene Symbol: -
Assembly: GCA_949987775.1
Location: OX465266.1:9318220-9366683[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.4 2e+02 4.1 0.0 2 23 476 497 475 497 0.93

2 19 0.01 1.4 10.9 0.1 1 23 507 530 507 530 0.95

3 19 0.31 43 6.2 0.8 1 21 648 668 648 669 0.93

4 19 0.043 6 8.9 3.8 2 23 711 732 710 732 0.95

5 19 4.8 6.7e+02 2.5 1.8 1 23 744 768 744 769 0.89

6 19 0.00017 0.023 16.5 0.2 2 23 775 798 774 798 0.97

7 19 0.045 6.2 8.9 0.2 1 23 804 826 804 826 0.93

8 19 0.0026 0.37 12.8 3.3 1 23 832 854 832 854 0.98

9 19 0.46 64 5.7 0.6 2 20 865 883 864 885 0.91

10 19 0.013 1.9 10.5 0.2 1 23 963 985 963 985 0.96

11 19 2.5 3.5e+02 3.4 7.2 1 23 992 1014 992 1014 0.95

12 19 0.0017 0.23 13.4 1.8 1 23 1056 1079 1056 1079 0.95

13 19 0.00022 0.03 16.2 1.4 1 23 1086 1109 1086 1109 0.98

14 19 0.0047 0.65 12.0 0.2 2 23 1132 1154 1131 1154 0.96

15 19 0.014 1.9 10.5 1.2 3 23 1172 1192 1172 1192 0.96

16 19 0.00037 0.051 15.4 0.1 2 23 1219 1240 1218 1240 0.97

17 19 6.1e-05 0.0085 17.9 4.2 1 23 1245 1267 1245 1267 0.97

18 19 0.00011 0.016 17.1 0.1 1 23 1273 1295 1273 1295 0.98

19 19 0.0053 0.74 11.8 1.9 3 23 1303 1324 1303 1324 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.4	2e+02	4.1	0.0	2	23	476	497	475	497	0.93
2	19	0.01	1.4	10.9	0.1	1	23	507	530	507	530	0.95
3	19	0.31	43	6.2	0.8	1	21	648	668	648	669	0.93
4	19	0.043	6	8.9	3.8	2	23	711	732	710	732	0.95
5	19	4.8	6.7e+02	2.5	1.8	1	23	744	768	744	769	0.89
6	19	0.00017	0.023	16.5	0.2	2	23	775	798	774	798	0.97
7	19	0.045	6.2	8.9	0.2	1	23	804	826	804	826	0.93
8	19	0.0026	0.37	12.8	3.3	1	23	832	854	832	854	0.98
9	19	0.46	64	5.7	0.6	2	20	865	883	864	885	0.91
10	19	0.013	1.9	10.5	0.2	1	23	963	985	963	985	0.96
11	19	2.5	3.5e+02	3.4	7.2	1	23	992	1014	992	1014	0.95
12	19	0.0017	0.23	13.4	1.8	1	23	1056	1079	1056	1079	0.95
13	19	0.00022	0.03	16.2	1.4	1	23	1086	1109	1086	1109	0.98
14	19	0.0047	0.65	12.0	0.2	2	23	1132	1154	1131	1154	0.96
15	19	0.014	1.9	10.5	1.2	3	23	1172	1192	1172	1192	0.96
16	19	0.00037	0.051	15.4	0.1	2	23	1219	1240	1218	1240	0.97
17	19	6.1e-05	0.0085	17.9	4.2	1	23	1245	1267	1245	1267	0.97
18	19	0.00011	0.016	17.1	0.1	1	23	1273	1295	1273	1295	0.98
19	19	0.0053	0.74	11.8	1.9	3	23	1303	1324	1303	1324	0.96

Sequence Information

Coding Sequence: ATGGATGCCCCTCCCCCGTTGATGCTGTGCATGGAGAATGCAGCCGGGCAGGAGGTGGCGCTGCAGATTGAACCAGGAGACGACTTCCATACATTCCTCGTTAAGGCCAAAGCACTCTTGGGCTACGATATAGACATAAACTCGATAACTCGCAACCAAACCGTATCTCTAACCGACAATATCTATCAATTTTTTCTTAACTCTGAACAAACCCTGACAAATGAATTGAACGAACAAATGCCGGGCAATACCGAAGACTTGTATATTCTGGAAGACGGTACTCAAATCAGAGCTTCACAAATACACTTTGATAATGACGATCCTCCCGTAGACCTTACTGCAGAATGCATCCCTTTCGTCAAACACGGTGACGCTGTCGACGAACCAGACGAAACCGCTGTTACAGAAttcgaaaacaaaatttacaacATAGTCAGTAGCCCTGAAAGACCCAAAGATAACGACTTCATTATACCTTTCAAATTAATCTATAACAATGGTTCTGGCTTTGAAGCGCAGTTTACAAAGTTTCTAGAAAGTAACTTGAAAACCTACGCGACATTGAATCCTGTTACTAATAGAAACAAATCGCCTAGAAGCCTCATTAGAGATAACTACAAAAACTATGATGACTCCTTCCATAGTCACAGAAGCGGCAATGATTTCACACACTACACTAGAGAAGAAATCCTTAACATGTTTAAAGATTCTCCTGTCGCATCTTTGCCTTATGAAAACCAATTTGCTGAAAAGAGAAGGCATGTCCGCAAGAGCGATCCTTCGAGAGTTGTACACAAGAATTATAAGCCTATATCGTACATAGACGTAGATGGGGTGTTAATAGCTGAGTCTGAAAGCCAGAACTGTTTCATTTGTGACAAATTCGTCGACAATAACATCGATAAATTGTATCTGTTCGACAAAGAAGACCAGAGATTGCATAGAAATTCACCGCAGAAGAAACTGTCGACTCagttgaaaattatttgcgaTCAGTGCTTAGAGGAGAACTTTAAACCGTCTAGAATGAAAAGTCCTAACCAGTCGTTGAGTCAGGACGAGTTTCTTGTCATCCGAAACAATCAGCAGTATATCTTCCAGAAAATGAAGCCCTTGAATTTCAGTGCCTCTAAAAagtttaacaaaataaatgattatttgaAGACGAAAGATGCTGGCTATTTCAAAAAAGACAAATCTGGCTACGTGAAAGTAGAAATAGGTTCGGACGGCGAGATTGTAACGCGACCGTTACAAAAAGACGATGACGTAACATCCAAAGACGATAACAAGGACAGCTCTAGTGACGTTGAAATTATCGAGAACGAGTTGGAAGCTGATGATAACGCCGACAGTCTTGAAGAAGCTGATGAAGAGGTTATAGAGTTCTTGGGGAAGCACCAGGGAGACAGCAATGAGGAGCTGAAGTGTCgATTCTGCGAGGTCGTATTTCCGTCTGTGTCCGATGTGATAGACCACGGAGAAGTTCACAAACATGTTGCAGAAGATGATGAGGTGTTCCCGTGTCCACTCTGTGACTATGgATATGCCAACTTCAAATGGCTGAAAGGGCACCTGAAGGCTGCCCACGACAAACCTGCTGTGGTCAAAGATGAAGGGAAAACTGATGATGGGAATCCACCTCATGATAATAGTAAAGATACAGAAGAGGGTAAAGATGAGTCTTCGCCTATAGCTGCCAGGACTAGGAGCGCTGCGAAAAATAACGATGGAACGGAATCCAAAGAAAACACAGTAAAGGCAGATGATAAACCAGAAGAGCAGGATGGTTTGTCTCAATTCGTGATAAAAACTGAAGTAAAACAAGAGAGTGTGGATTCGAGCGATGAAGAGATATGGATCGTACAAGCTGACGAACAGACAAATAACAAAGTTGAAGTGCTGCTAGATGTTCAGaACGAAAAAGATGGACCTAGTAGACATCGTTGTGATGCGTGCGGCCTAATATTTATATCAACTGAAAGTCTGTCCGTCCATAAATGCCGTCGCAAAGGACAGAAACGGAGGTCTGGTAAAGAGGATGGACACTGTGTGCCTACCAAAGAGGATTTTATTAAGAGACCAaggaagaagaaaaacaaagaacCTACTTCTGATCCACAGATAGTGACGTGTCACAATTGTAATGAGTCATTCACGTCAAAAGTTAGGTTGAAATTTCACATGCAATTCCACGACTCAACGAACATGTTATCAGCGGAGGGGGAGTACGCTTGCAATGAGTGTGAGAACGCGACGTTTTCAACTGAAACCGCATTATTCGACCACGTACACTTCCAACACCATAAGCAGAGGCGGTGGCAGTGCCCGGTGGTGGGCTGTGGGAAGACTTTCTACCTCAGAGCGACGCTAACGAAGCACAGTAGAAGTCACACGGACACCCGACGCTACGTGTGCGGGACTTGCGGGAAGAGATTTCTAGACAAACAGACGCTGGACGAACATGGAGTCACACATCTACAGATAAAGCCGTTCCAATGCCACATCTGCCTGAAGCAACTAACTCGTCGCTCCCGGCTCCGAATGCACCTCCGAGCTCATGAGGAGGAGTTATGTCCTCGCCTGGTGCTCGTGTGCTGCGTGTGTGAACGCGCCTTTAGAGACCACAACGATATACAGGACCACGTGACCCGATCTCCGGAATGCATAGAAGCGTTCGCGAACGAGTTGAAAGAGGAAGAAGCGGTCACAGTGCAGCTGTCGCCCACTAGTGGACTAGTCAGGCATACCGTGCAGATTGTTGAGTccccaaaactgtcaaaaccaATCCGGCGTGAAGTGGAGTCGGGTGAGGCTGAGACATTACTTAGAGGGGTGGCAGAGACCGCGCGCGCCATCGCACGCGTCGTTGAAATAGAGAAAGCATTCCGATGCGAGTACTGTGAAGACGTATTCTACTCTGAAAGCGGACTGAACGAGCACCGCGTCATCCACAAGGGAGTGAAAAATCCTTTCACTTGTCACATCTGCAAAGTTAGCTTCGCTACTTACTCCAGATGTACCACCCACAAAACGACCCACGGTTTCTACAAGCGATCCCTGGCTGATGCTAAGAAGCAGCCTGAGAAACAAGACTCCAAACAAGAGGCCGGGCCTTCCTCCACCGGCATACTTGGATATGGAGACTTTCCTGTTGTCAAGCATTTCTTGTGTGAGgacTGTGGTCGTTCGTATCTGCACTGGACCTACTTACAAGTACACCGTCGTATGAAGCATGCCAACGAGAACTTTCTGTACAAGTGCACGCAATGTGATATGTCGTTTCCTAACAGCTGGAGCCTATCATACCATAAAAAGAAGATACACAGCAAGCAAGAACAAGAAGAATCAAGCAGCAACAAGGTTCTCAAAGATAAAGAAGACTATAGAATCCCATGTAGAGACTGTGATGAAGTGTTGCCAAACAAAACTGCACTCTATAAGCATAGGAAGAAGGACCATTGTAGCGATGTGTCTCTGAGAAATAGTGCCAAGCCGGGGAATGGGCTGTGGTGCGGCGTGTGCGGGCGGCGCTGCAGCTCGCTGTCTGCACTACACGCGCACGCTAACGCGCACACTCCGCTCGCGCACGCGCACACGCACTCGCATACGCATACGCAACCGACAACGGGGCAAAGGGAATCGCTGGAGCTGACGTGTTCGGTCTGCGACAAGTCGTTCTGGTCGCGGGCCGAGCTCAGCGTCCACCTGCGGGTGCACGCCGCGCCCACGCACGTGTGCGCCACGTGCGGCCGCAGCTTCAGGACACACAGCATGCTCAGCGAGCACACGCGGACACACACCGGCGAGCGGCCCTACCCGTGCGACGTGTGCGGGGTCGCGTTCAGACGATCGACAGCGATGCGCAACCACCGTCTGATCCACAGCGGCGTGCGCGCGTGGGGCTGCGCGCGCTGTCCCAAGCGGTTCCGCATCCGCTCCGACCTGCGCACGCACACCCGCCTCAAGCACCCCGCCACACTCGTCGTCATTgagGTTTCGGGATTGAACCCCACTCCGGAGGAAGTTCTAGAACGTCTGACGGCGAACAACATCTCTCACGACAAAGTCATTGAAATTACCAAAATGTCTTTTCCCAAGGGCACTACCAGCATAGTTCCAAACAGTTCTCGAGCTTTAGACATGTTGTCGCACGTACCAAGGAGTCAGGTCGCTTGCAGTCGCTTCCGACCAGAGAGGCCGTtTGAACTATTCCAGCCGGCCCGTCGCGGGAGAGGTATCGCGAAAAACCCGAGAAAACCGAAAATACTGCAACGGAGTGCGGACGACTGTACCGCCTCACACAGCGTAGCCTTTGGTACTGGGCCACAAAACGACCAGTTACAGCAGCAATCCCTCCCAGAGCTAtgccccccgccccccgccccccccgcGCCCCCCACTGCACTCAACGCCCGCGGGGAGGAACTAACCGAATTAAACGTACAGTTGTTACTGCGAGACGGAGTGCTCGTCAACGGAAACCAAATGGTGCAACTACAACTAGACGATAACATGCTATTAGAGTAG
Protein Sequence: MDAPPPLMLCMENAAGQEVALQIEPGDDFHTFLVKAKALLGYDIDINSITRNQTVSLTDNIYQFFLNSEQTLTNELNEQMPGNTEDLYILEDGTQIRASQIHFDNDDPPVDLTAECIPFVKHGDAVDEPDETAVTEFENKIYNIVSSPERPKDNDFIIPFKLIYNNGSGFEAQFTKFLESNLKTYATLNPVTNRNKSPRSLIRDNYKNYDDSFHSHRSGNDFTHYTREEILNMFKDSPVASLPYENQFAEKRRHVRKSDPSRVVHKNYKPISYIDVDGVLIAESESQNCFICDKFVDNNIDKLYLFDKEDQRLHRNSPQKKLSTQLKIICDQCLEENFKPSRMKSPNQSLSQDEFLVIRNNQQYIFQKMKPLNFSASKKFNKINDYLKTKDAGYFKKDKSGYVKVEIGSDGEIVTRPLQKDDDVTSKDDNKDSSSDVEIIENELEADDNADSLEEADEEVIEFLGKHQGDSNEELKCRFCEVVFPSVSDVIDHGEVHKHVAEDDEVFPCPLCDYGYANFKWLKGHLKAAHDKPAVVKDEGKTDDGNPPHDNSKDTEEGKDESSPIAARTRSAAKNNDGTESKENTVKADDKPEEQDGLSQFVIKTEVKQESVDSSDEEIWIVQADEQTNNKVEVLLDVQNEKDGPSRHRCDACGLIFISTESLSVHKCRRKGQKRRSGKEDGHCVPTKEDFIKRPRKKKNKEPTSDPQIVTCHNCNESFTSKVRLKFHMQFHDSTNMLSAEGEYACNECENATFSTETALFDHVHFQHHKQRRWQCPVVGCGKTFYLRATLTKHSRSHTDTRRYVCGTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELCPRLVLVCCVCERAFRDHNDIQDHVTRSPECIEAFANELKEEEAVTVQLSPTSGLVRHTVQIVESPKLSKPIRREVESGEAETLLRGVAETARAIARVVEIEKAFRCEYCEDVFYSESGLNEHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKQPEKQDSKQEAGPSSTGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCTQCDMSFPNSWSLSYHKKKIHSKQEQEESSSNKVLKDKEDYRIPCRDCDEVLPNKTALYKHRKKDHCSDVSLRNSAKPGNGLWCGVCGRRCSSLSALHAHANAHTPLAHAHTHSHTHTQPTTGQRESLELTCSVCDKSFWSRAELSVHLRVHAAPTHVCATCGRSFRTHSMLSEHTRTHTGERPYPCDVCGVAFRRSTAMRNHRLIHSGVRAWGCARCPKRFRIRSDLRTHTRLKHPATLVVIEVSGLNPTPEEVLERLTANNISHDKVIEITKMSFPKGTTSIVPNSSRALDMLSHVPRSQVACSRFRPERPFELFQPARRGRGIAKNPRKPKILQRSADDCTASHSVAFGTGPQNDQLQQQSLPELCPPPPAPPAPPTALNARGEELTELNVQLLLRDGVLVNGNQMVQLQLDDNMLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -