Atae019017.1
Basic Information
- Insect
- Aproaerema taeniolella
- Gene Symbol
- -
- Assembly
- GCA_949987775.1
- Location
- OX465248.1:18376745-18392429[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 5.5e-05 0.0077 18.0 2.5 1 21 202 222 202 223 0.97 2 28 0.00058 0.08 14.8 0.9 2 20 254 272 253 274 0.93 3 28 0.0015 0.21 13.5 1.8 1 23 306 329 306 329 0.97 4 28 0.07 9.8 8.3 0.2 3 23 382 405 380 405 0.94 5 28 0.01 1.4 10.9 0.2 1 23 429 451 429 451 0.95 6 28 0.00012 0.017 17.0 3.6 1 23 488 510 488 510 0.97 7 28 0.00014 0.02 16.7 1.5 2 23 551 573 550 573 0.97 8 28 0.0025 0.35 12.8 0.5 1 23 623 646 623 646 0.97 9 28 0.0042 0.58 12.1 1.2 1 23 704 726 704 726 0.97 10 28 0.03 4.2 9.4 5.3 2 23 738 759 737 759 0.96 11 28 0.3 42 6.3 0.5 2 23 771 792 770 792 0.93 12 28 0.0035 0.49 12.4 2.2 1 23 802 824 802 824 0.98 13 28 0.00034 0.048 15.5 4.2 1 23 848 870 848 870 0.97 14 28 0.00023 0.032 16.1 2.8 1 23 881 903 881 903 0.97 15 28 2.5e-05 0.0034 19.1 0.4 1 23 911 933 911 933 0.98 16 28 0.0059 0.83 11.6 0.1 2 23 953 975 952 975 0.97 17 28 0.066 9.2 8.4 2.4 1 23 993 1015 993 1015 0.96 18 28 0.0015 0.21 13.5 0.3 1 23 1099 1121 1099 1121 0.97 19 28 9.8 1.4e+03 1.5 0.4 2 20 1125 1143 1124 1145 0.82 20 28 1.3 1.8e+02 4.3 1.6 2 23 1164 1186 1163 1186 0.91 21 28 0.02 2.8 10.0 1.5 3 23 1203 1223 1201 1223 0.93 22 28 1.2 1.7e+02 4.4 3.2 5 23 1233 1251 1230 1251 0.94 23 28 0.013 1.8 10.6 0.6 2 23 1262 1284 1261 1284 0.95 24 28 0.0091 1.3 11.1 0.7 2 23 1301 1319 1301 1319 0.93 25 28 0.31 43 6.3 1.7 2 22 1323 1343 1323 1343 0.94 26 28 0.16 23 7.1 0.9 2 23 1392 1413 1391 1413 0.94 27 28 0.0057 0.79 11.7 0.4 2 23 1424 1446 1423 1446 0.96 28 28 0.35 48 6.1 4.8 2 21 1484 1503 1483 1504 0.94
Sequence Information
- Coding Sequence
- ATGGAGGGCACTAGGCGAGGGACTCAGCTGCACCATGTCGTCGGCGTAGCTAATATTGTTCAGGCATTCGCCACCTATATGACAGTCGCTTCTGGTGCTACTGAGTTCCTCGATCAGTCCAATAATATATACGACGGTGATGGACTCCCGGATAAGATTTGCTCGGAATGCATCCAGAAGCTCAGCAGCGCGTATATCTTCAAGCAACAATGCGAACGTGCAGACATGGAGTTACGCCGGAACTATGTTCCTCCGCCCGGGTTCAGCATCACTCCCCCGCCCCCGAACCGTCAAAGCAGCGACTCTGCTTTCTCTTCAGCCAACACGGACATGTCTTTCCATCATAAACCGCCTTCAAATACTGAGATGGTAACTCCAGCTAGCAGGACTCGGAAACGAAGTCATGAGAGCGCCGACGAATCGGTCAGCAGCCGTTCCCGAGACTATAGGCCCAGCAGCTCTAAAAGAGTCGAAGAATTAAGAAACTCCAGCAAGAGATCTCGACATGAATCACCTAACGCATCTATGGACTCCGATTACGAAGACAACAGTTTCTCACAATTTTCAGCTGAAACTGACTCAGACGAACCCCTTTCTCACACTTTCAAGTGCAAAAAATGTCCCAAAGAGTTTAATTCATCAAACAGTCTGCGTTCACATATAAGGCActgcaaagaaaaaaaagaaaatacacaGGATGCCATCGTAAATATTCCAAGGAAAAGTATGGAAGATGCAAAAGACTCTGATGACAAGTTGACTTGTGACAAATGTAACAAAACATTCAAGTTGAAAATTATGTTGAAACGTCATCAGGAAAATTGTGGAAAGTCTCCGCAAATCACCAAAGAGTTGCTGATATCCCTGGAGCCTGTAGACGCGGTGTTACCGATGTCGGTGGACCCGACTAGTAAGTTCGAATGCGAGATATGTTTGAACAAATTCAAAGCATACGAGAACTTGGAGAAACACATGCGAATCTGTCATGCGGCGATACCGAAAACACCGAAGCCGACTAAAGTAAATGTAAATGAGAACAATCTATTTCCCTGCCTGTATTGCCGTGCTTTGTTTGACAACTACGAGCCGTATACAAAGCATTTCTCGCAATGCAAAGAAAAGGTGGACACCCTGCCTATAGATTGTCCTGGAACCGGATGCAACAGGACGCTGAGCACCAAAACAGCTTACGTTTCTCATGTTAAGAGGTCACATTTTGGCCTTCCAAACACAAACATTAAGAATCTGGAAGGACATGCATCTGTCCCCTTATCTGCGAAGACGTTTGACTGTAGGATGTGTAGCAAGAAGTTGGAGACGCAGGAGGAGTTAATCAAACATTTGGCAGCTCACATGTCCAACGTTGATGAAACGGAAGAAATCTTAGATGAAGGATCCAGAGCAAGCACTGCCGATGACACAATGGACTCGGACTACAGAGGCTCCCCCGTAAACGGTCTGTTCAAGTGTTCCATCTGTGACAAGTCCTTCAAATACAAGAAGGCATATCAGACGCACTTTGCCAAACACAATGAGCAAACGCCTGTGGAGGTGAAAGTGGAACCGCCTGACAAGCCCTTGCCTGCTGAGGAGGAGCAGATGTATAGAGACTCGGAATCGGATTCAAGCGGAGGAGAAGGCGACGATCTAACTTGTGATATTTGCGAGAAAGAGTTCTCGTACAAGCGACTTCTTTTGCAACACAAGCGGACCAAGCACAATATGAGCTCGGGCACTAAACGAGCCAAGATCACTCTGAAGGACTGCTCGGTGCGGTGTCTCATTTGTGACATCACTATGAAGGTATCGGGTATAAACGAGCACAACCAGACCCACATCCAGGCCAACATCCGGCCGCGCAACCAGTACACGTGCGGCGACTGCTCCGAGCAGTTCAAGGCGTGCAGCGCGCTCGCCACGCACATCAAGCTGGTGCACCGGCTCAAGCAGGCGCCGCAGAAACAACAACAGGACTTTGAAGGTACTGCAGACCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAAACGGAACCCCTGGACGAGGTCCAGAGTCACAACGGCTTTGCGGAGGTTCCGGTGACTAACGGCCCACTAGTGGACTTGGACGGATTCTCGTGCCACTTGTGTGGGAAGAAGATGGCCACCCTCATCTCCTTGAAGCGCCACGTCAACTGGCACACCAACGTCGGGAACAATCTGCAGAAAACCATCGAGTGCTTCGTTTGTAAGGAGACGTTCCGTTTCCAATGCCACTACCGCCTCCACATGAAGGGTCACTACGCGGACGAGTCGCTCCCGCCCGCACTGCTCACGTGCGCCATCTGCGGCCGCCGCTCCAAGCACCTGCGCGCGGCCAAAGCACACCTCGCCTTCCACAACCAGACGCGGTTCAAAGCCAAGGACTACCAGTGCTCCATCTGCAAGCGCGTCTTCCAACACAGGAAAGTGTACTTATCCCACATGGCGATACACTACAAGCGCGGCGAGGGTCAAAACGCCATAGTAGGTGACCGGCCCCTCTCCAGCGACCCCTTACGACCCCACACGTGCCCGCAGTGCGGCAAGGGATGCGACTCCGAGACCTCACTCAAACACCACATCCGCTGGCACTCCTCCAAATCTTCACTCTACGGCTCTCGACACGAGTGCCACATCTGTCAACTCGTCTTCACCAACAAGCGAAGACTCGAAATCCACATCAGAGACCATTATGAAGACGAAAACGGACCCTACAAATGCACTATCTGCGGCAAAGGATACATCGATGAGGACTACTTCCGAAGACATGTTAAAGGACACAATTTCGACAATCAGTCCCATAAGAAAAGGATTGAAAAGCTGAGGAAGGGAAAAGTGAAGTGTCCGATTTGTTCGCGGTATTACCCCGAATTAGTGAAGCTGATCAGGCATATAAAGCGAATGCATCCGGAGAGTAAGATGATCAAAAATGACCCGGATGCCCCACCTCAGCAGTATTATAACTGCAAGCTCTGTGCCAAAGTGTTCATGACCGAGAGACGACTCAAACACCACGAGGAGTCCCATTTGAGGAAACCCGAGTTTTTCAAATGCAAGTTCTGTGGTATCAAAAGCGCATCCATACAAAAACACCGTCTGCATGTTAAGCAAAGACATCTCACCCAGAAACACTTTGATAGCCCACTGAAGTGTCCGCATTGCACTGAGGAGTTTATGTGGGGCTACAAACTTCACCATCATGTAAAAGACGTTCACGGAATCGAAGAAGCTTGGTTAGCAGAGAGAACTGAAGAACCATTGGGACCGCTCAAGGAATTCCAATGCTCAATCTGCTTGAAAATCTTAGCGACCAAAGGCAACTATGAACGACACATAGATTACCATAACTCCCTGCGTTGCAACTACTGTTTCGACTACTTCAGTTCCCTCAAGTTTTTGGAAGGGCATTTATTATACAGCTGTGATAAGAAAAAGTTGATCGGTCCAAGTGAAACTTATCCAAAGAGAGTGAAATGCAATATTTGCTATAAAGCGTTCGACTTGCAAGTTAGGTTGGACTGTCATTTACGCACGCAACACGGAATACTGGTCAAGAGGGAGCCGTCTGAGGGGAAACGAGACTGTCTCTGCGACTATTGCTTCAAAGTCTTCGAGAATGAATATGCCCTTACGATGCATAAGGTCTATCATCGAACAATTGGGTATTACGGTTGTATCTATTGCAGCAGGAAGTTTAATAATCTCGTGTCAtacaacaaacataaaaatcatCACTTTAATAAGCTTTACCCGGACGATCCTACTAAATGTGAGCACTGTGACGAGACGTTTGTCGCGTTCCGAGATATGATCGACCACATGAAGGAGGTACATGGCGATGACAAGGAGTGGATTATAATGCCCAAAGAATCTATCGAAGAGAAGTGCCCGATTTGCAACAAAGTATTCTATAACCTTCAGAGACATTTAGTTTACCACGAGGAAAACAGATGCAAAAAATGTGGCGAATACTTTTACTCTACAGTTGATTTCGACAACCATCTATGTACGATTGAGAGCGATGAAGAAGTCAATGAGGAAAATGAAAATGATATTCGGCCAAAATACGAAGAGTGCGCGTTCTGCTTTAAGCCTATCACTAAAAGGGTCTCCAAAATTATGCACAATAGTCTTCACAATGTTTCGGGAGCGATCTCTTGTCGGTTCTGCTCaatgaaatttaaaactttagacGCATTCAATATTCACGCATTCTCTCACAGAAGCAGGAAATACAATAAGAAACCTATTAAATGCAGAATTTGCAAAGAAAAGTTCGTCAAATATGGTCCATTTATAAAGCACATGAAAGTGGTACACAAGACTGCGAAAAAGGTGCATTATCGAGCGACTGTGAAGCCGGAAAGATGCGTCGTTTGCGGCGATAACTTCCCGAACCTTCATAACCACTACCGGAGCCATTTGCAGAATCAGTGCTTAAATTGTCATAAGTATTTCACATCTTCCAAATTGTTTTCTCAACACCAGTGTGATAAAGAAGATTCGGATCCGTCAAAAGTGTTCACTAGCGATGCTGATCTATACACATTGATCAAAACTTACGTTCCTAAAGACGAGAAGGATGATGAGAAATATTATGGCTACACGGACGacgaggaagaagaagaagaagagattcAACAACAGACTAATGGTGAAACTCAAAATGGTGAAAGTAAAACTCTAAATGAAGTGGACAGCATGATTATGCATCCATTTGTGATTTCTGATGTTCTATCGTTATACGAGAAGAAAGAAGAATTGTTAGCTCAATATCAAAAAGGAGACCCTAAGAAAAAAGAGCTGAACCCCAAGAAGAAACCGGGTCCAAAAAGTAAGACGGAAAAGAAGAAAGCCGATAAAAAGAAAgatgagaaaaagaaagaaaaacatgaGGATGATGATGATAGTGAAATAGAACTAGTTGAATTAttagatgatgatgatgttggAGTTACTAGTGAAcccattattattacaattgACGATGATTGA
- Protein Sequence
- MEGTRRGTQLHHVVGVANIVQAFATYMTVASGATEFLDQSNNIYDGDGLPDKICSECIQKLSSAYIFKQQCERADMELRRNYVPPPGFSITPPPPNRQSSDSAFSSANTDMSFHHKPPSNTEMVTPASRTRKRSHESADESVSSRSRDYRPSSSKRVEELRNSSKRSRHESPNASMDSDYEDNSFSQFSAETDSDEPLSHTFKCKKCPKEFNSSNSLRSHIRHCKEKKENTQDAIVNIPRKSMEDAKDSDDKLTCDKCNKTFKLKIMLKRHQENCGKSPQITKELLISLEPVDAVLPMSVDPTSKFECEICLNKFKAYENLEKHMRICHAAIPKTPKPTKVNVNENNLFPCLYCRALFDNYEPYTKHFSQCKEKVDTLPIDCPGTGCNRTLSTKTAYVSHVKRSHFGLPNTNIKNLEGHASVPLSAKTFDCRMCSKKLETQEELIKHLAAHMSNVDETEEILDEGSRASTADDTMDSDYRGSPVNGLFKCSICDKSFKYKKAYQTHFAKHNEQTPVEVKVEPPDKPLPAEEEQMYRDSESDSSGGEGDDLTCDICEKEFSYKRLLLQHKRTKHNMSSGTKRAKITLKDCSVRCLICDITMKVSGINEHNQTHIQANIRPRNQYTCGDCSEQFKACSALATHIKLVHRLKQAPQKQQQDFEGTADLADFCEVVVTKTEPLDEVQSHNGFAEVPVTNGPLVDLDGFSCHLCGKKMATLISLKRHVNWHTNVGNNLQKTIECFVCKETFRFQCHYRLHMKGHYADESLPPALLTCAICGRRSKHLRAAKAHLAFHNQTRFKAKDYQCSICKRVFQHRKVYLSHMAIHYKRGEGQNAIVGDRPLSSDPLRPHTCPQCGKGCDSETSLKHHIRWHSSKSSLYGSRHECHICQLVFTNKRRLEIHIRDHYEDENGPYKCTICGKGYIDEDYFRRHVKGHNFDNQSHKKRIEKLRKGKVKCPICSRYYPELVKLIRHIKRMHPESKMIKNDPDAPPQQYYNCKLCAKVFMTERRLKHHEESHLRKPEFFKCKFCGIKSASIQKHRLHVKQRHLTQKHFDSPLKCPHCTEEFMWGYKLHHHVKDVHGIEEAWLAERTEEPLGPLKEFQCSICLKILATKGNYERHIDYHNSLRCNYCFDYFSSLKFLEGHLLYSCDKKKLIGPSETYPKRVKCNICYKAFDLQVRLDCHLRTQHGILVKREPSEGKRDCLCDYCFKVFENEYALTMHKVYHRTIGYYGCIYCSRKFNNLVSYNKHKNHHFNKLYPDDPTKCEHCDETFVAFRDMIDHMKEVHGDDKEWIIMPKESIEEKCPICNKVFYNLQRHLVYHEENRCKKCGEYFYSTVDFDNHLCTIESDEEVNEENENDIRPKYEECAFCFKPITKRVSKIMHNSLHNVSGAISCRFCSMKFKTLDAFNIHAFSHRSRKYNKKPIKCRICKEKFVKYGPFIKHMKVVHKTAKKVHYRATVKPERCVVCGDNFPNLHNHYRSHLQNQCLNCHKYFTSSKLFSQHQCDKEDSDPSKVFTSDADLYTLIKTYVPKDEKDDEKYYGYTDDEEEEEEEIQQQTNGETQNGESKTLNEVDSMIMHPFVISDVLSLYEKKEELLAQYQKGDPKKKELNPKKKPGPKSKTEKKKADKKKDEKKKEKHEDDDDSEIELVELLDDDDVGVTSEPIIITIDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -