Basic Information

Insect: Aproaerema taeniolella
Gene Symbol: -
Assembly: GCA_949987775.1
Location: OX465271.1:4169664-4174492[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00039 0.054 15.4 0.9 1 23 28 51 28 51 0.97

2 23 0.041 5.7 9.0 3.4 3 23 122 142 120 142 0.96

3 23 0.00037 0.052 15.4 0.1 1 23 146 168 146 168 0.97

4 23 0.0081 1.1 11.2 0.4 1 23 175 198 175 198 0.97

5 23 0.0016 0.23 13.4 1.6 2 23 206 228 205 228 0.94

6 23 0.00014 0.019 16.8 1.6 2 23 234 256 233 256 0.96

7 23 2.8 3.9e+02 3.2 0.1 2 23 318 340 317 340 0.91

8 23 0.38 53 6.0 0.2 2 23 366 388 365 388 0.92

9 23 0.044 6.1 8.9 0.2 2 23 411 432 410 432 0.96

10 23 0.0062 0.86 11.6 0.1 1 23 436 458 436 458 0.97

11 23 0.00019 0.026 16.4 0.7 1 23 463 486 463 486 0.96

12 23 0.19 27 6.9 0.7 1 11 492 502 492 515 0.79

13 23 9.2e-05 0.013 17.3 0.1 2 23 522 544 521 544 0.95

14 23 0.00052 0.072 15.0 1.8 3 21 552 570 550 572 0.88

15 23 0.00013 0.018 16.9 0.9 1 23 578 600 578 600 0.98

16 23 0.014 1.9 10.5 4.0 1 23 731 754 731 754 0.93

17 23 0.016 2.3 10.3 1.4 1 23 850 872 850 872 0.98

18 23 0.025 3.5 9.7 5.2 1 23 879 902 879 902 0.97

19 23 0.15 20 7.3 4.5 2 23 910 932 910 932 0.97

20 23 0.0011 0.15 13.9 1.8 2 23 940 962 939 962 0.96

21 23 0.14 20 7.3 3.7 1 23 968 990 968 990 0.97

22 23 2.9e-06 0.0004 22.1 3.5 1 23 996 1018 996 1018 0.98

23 23 0.00061 0.084 14.8 2.4 1 23 1024 1047 1024 1047 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00039	0.054	15.4	0.9	1	23	28	51	28	51	0.97
2	23	0.041	5.7	9.0	3.4	3	23	122	142	120	142	0.96
3	23	0.00037	0.052	15.4	0.1	1	23	146	168	146	168	0.97
4	23	0.0081	1.1	11.2	0.4	1	23	175	198	175	198	0.97
5	23	0.0016	0.23	13.4	1.6	2	23	206	228	205	228	0.94
6	23	0.00014	0.019	16.8	1.6	2	23	234	256	233	256	0.96
7	23	2.8	3.9e+02	3.2	0.1	2	23	318	340	317	340	0.91
8	23	0.38	53	6.0	0.2	2	23	366	388	365	388	0.92
9	23	0.044	6.1	8.9	0.2	2	23	411	432	410	432	0.96
10	23	0.0062	0.86	11.6	0.1	1	23	436	458	436	458	0.97
11	23	0.00019	0.026	16.4	0.7	1	23	463	486	463	486	0.96
12	23	0.19	27	6.9	0.7	1	11	492	502	492	515	0.79
13	23	9.2e-05	0.013	17.3	0.1	2	23	522	544	521	544	0.95
14	23	0.00052	0.072	15.0	1.8	3	21	552	570	550	572	0.88
15	23	0.00013	0.018	16.9	0.9	1	23	578	600	578	600	0.98
16	23	0.014	1.9	10.5	4.0	1	23	731	754	731	754	0.93
17	23	0.016	2.3	10.3	1.4	1	23	850	872	850	872	0.98
18	23	0.025	3.5	9.7	5.2	1	23	879	902	879	902	0.97
19	23	0.15	20	7.3	4.5	2	23	910	932	910	932	0.97
20	23	0.0011	0.15	13.9	1.8	2	23	940	962	939	962	0.96
21	23	0.14	20	7.3	3.7	1	23	968	990	968	990	0.97
22	23	2.9e-06	0.0004	22.1	3.5	1	23	996	1018	996	1018	0.98
23	23	0.00061	0.084	14.8	2.4	1	23	1024	1047	1024	1047	0.97

Sequence Information

Coding Sequence: ATGAAGAAGCAATGGCATAATTTGACAAATTTGCTTAAATATTCAAACGCTACCCCTTTTAAGGACAGGAACGATGCAGGATACATTTGCGCGTACTGTTTTAAAACATTTCCTGATCCAGATGTGTTGAGGAACCACACACATACAGATCATGTGAAAGAAAAGCCAACTTACAAACCTGGGGGCATAGCCAACTTCGTAGCGTTTCTTGATATAGTGGATCTCAAATGCTCAATCTGCAACGGTCCCATGGACAGTATTAATAATCTAATAGAACATCTAGTTGAAGCTCACGATAAGAAGTTCTATACGGTAACAGATTACTTCCAACCATTCAAACTAACCAACGAGCAGCGGATCAACTGTTGTCTATGCAACGAAGTGTTCCACAACATGAAGCTGCTGATGCAACACATGAATCTCCACTATAGAAACTTCATCTGCCCAGTTTGTGGCGCTGGTTTCGTAAACAGCTTCCGATTGAACAGACATGAAACTACACACGGGAAGAAGAAGTCTAGTTACCCATGTCGACATTGCGGACTAGTCTTCGCTGCAGAATCGAAAAAGAAAGCTCATGTCAACACGGAACATAAAGGCATAGCCGGCGACAGCGTTTGTCAAATTTGCAAAGAACGGTTTAAAAATTATTACCAGAAAACTCGGCACATGTCTCAAGTTCACAATGTTCAGGGTATCAAGTGTGATATGTGCGATAAACGATTCAGTTTGAAGCACAATGTAGTACTCCACATGCGTAATGTACATCTGAAAGAGCGTAAAGAAGCCAAACCAAGGAGGTTTCGATTGGGAAAAGTCACTAAAGCAACAGAGAGACGAGAACGCAAAGCCTGCCAAGAAGTAGTCATAAAGCAAAAGAATAACTTGATGAAAATCCTCATGAATTCAAACGCGAACCCAATCAAAGGGAAAGATATTTTAGACGGCATACAATGCCTCTATTGTCCTATATTTATAAAGGAGTCTGAAGATATGAAAGCACATTTTAATGCCGCACACAGAGACGAAAATTTCCTTCTATCAAAAATGAAGGGTTTTAAGAGGATAGTTTGGAAGTTAGACATAACAAATCTCACGTGTGACTTATGCGGCAACCCTACAAACACTATCAAAGATCTTCTTAAACATTTCAAAGACGAACATGCGATGGACGTATTTCCCGACTTAGACGATATATTCCTGCCGTTCAGATTCGATGAGGATGCACTGCGTTGCGTTATTTGTTCAACATCATTTCCAGCTTTCAAAGTTTTAAGAGAACATATGAACATTCACTTTCGGTTATACATTTGCGACTTCTGTGACGCTGGTTACGCTAATTACGAGTTGTTATGGCGCCACAAACTAAGACATAAAATCTCAAACTATTCTTGCGAGATTTGTAGCAAAGTCTTTACTAGTAAAGAGCGTGCGAAGCGTCACACCCAAATCGTACATTACGGTCTTAAGAAATATAAATGTAACTACTGTGACGAAAGGTTTGAAGCGTTCAACGTGAAATTATATCATATGAATAATGTTCACAATAAAAACTTAGGTCTCTCATGTCCGATTTGCGATAGGATTTTCATAACACCTTCGGCAGTTAGACAGCACGTGAAAAGCTATCATATGTTAGAGAGATCGCATCTATGCGAGCATTGTGGAAAAGGCTTCTACACGAGAGCGCAACTGAAGAGTCATGAAGGTGCACATGAAGATAGGACTATATACACATGTGATGTTTGCCAGAgcggttttaaaaataaatcggaGTATATAAACCATATTAAAAATCATGCTGAGATAGAATgtaacaCGAGccaaataataacaaaagatgaaAGTAAGTTCACGTCTGCCAAGAGTTTGAAAACGGCCGACCTATTTTGGACACGACGAATTACCAGAGACACGTCTACGGACACTATTGACATTAAATCTAAACTAAGCTTTGAACCTAAagaaataacactaaaattcgCTAAAGACGCCAAAGTAGCCCCTAAAGTAGTTTCCCCTAAAAGTAAAAGAAGCACTAAAACTCAAGGCAAGTCCGATTTTGCGGTTGGATCGGTCCAACAAAGAGTAGCAAAACGTTTAGCCGAAATAGAGCATCATCTGGACAATCTAAGAACGATTCTGTACAACTCCAACGCAACGCCAATCAAAGGGATGAGCGGGTTAGATTACTGTTGTTGCTTCTGTGAAGAAAAGTTCAGAGATCCCGCGGATCTGAAGACTCATACGTTAGAGAATCATGTTGGTTCGTATAAAACGTTCATGCAGGAATACAGTATATTAGACTTTATGGTCAAACTAGACATAACCGGATTGAAATGCACAGAATGTTCGCTAGAAATCAATGGAAACTTAAAAGAGTTGATGGATCATCTACAGCTGCACTATAAGTATATCCATACTGATATAAAGAACCATTTTGTTCCATTCAGGTTTGTAGACGGAATTATTCCATGTGTGTTCTGTTCAGCAGAACATGTCCACTTTAAAGCCGCGCTGGTACACATACGCGAGCATTATGATAACTACATTTGTGACCAATGTAACGCTGGCTGTGTAACCTACCAGCAATTGCGGATGCATGTTAAAAGGCACAATGTCACTGGGGAGGAACACAAATGTAAATTTTGTCCGAAAGTATTTAACACACTCTGTAAAGTCCGCGACCATGAACGAGTTACACACATCCGGAGTGAAAAAATCGCTAAATGTGTATTTTGCGATGAAAGATTCTGTTCTCACGGGCAAAAAATTACGCACATGATGAAAGTACATGGCTATAAACCTACACAATTACGATGCAAAGCTTGTGACATGACCTTCGTGACGCAATCACTTTTCCGGGAACACACAAAGAAATTTCACTTAATGGAGAAAAATCACGAATGCGGAACGTGCAGCAAGAAGTTTTTCAACACTAAGATCTTGAAAAATCACCTTCTGACTCACACCGACGTTCGTGATCACCAATGTGTTTACTGTTCCAAATCTTTTGCAAGGAAATATTCACTTACGCAGCACTTGAGAATCCATTTGAATGACAGAAAGTTTAAATGCCCTTACTGTGACCTAACGTTCATTCAGAAGTGCAGTTGGAAAGGTCATCTTCTTAGACAACATAACATCACTGCTACTGAATACTTCGATCATCCTGGCAGAAGTACACAGAGTGACTCTGAAAGTGAACTTGGGGATGAGCTGAAGTACCAATTTGAGAAGAGTGAACTCGAAAGTGATTAA
Protein Sequence: MKKQWHNLTNLLKYSNATPFKDRNDAGYICAYCFKTFPDPDVLRNHTHTDHVKEKPTYKPGGIANFVAFLDIVDLKCSICNGPMDSINNLIEHLVEAHDKKFYTVTDYFQPFKLTNEQRINCCLCNEVFHNMKLLMQHMNLHYRNFICPVCGAGFVNSFRLNRHETTHGKKKSSYPCRHCGLVFAAESKKKAHVNTEHKGIAGDSVCQICKERFKNYYQKTRHMSQVHNVQGIKCDMCDKRFSLKHNVVLHMRNVHLKERKEAKPRRFRLGKVTKATERRERKACQEVVIKQKNNLMKILMNSNANPIKGKDILDGIQCLYCPIFIKESEDMKAHFNAAHRDENFLLSKMKGFKRIVWKLDITNLTCDLCGNPTNTIKDLLKHFKDEHAMDVFPDLDDIFLPFRFDEDALRCVICSTSFPAFKVLREHMNIHFRLYICDFCDAGYANYELLWRHKLRHKISNYSCEICSKVFTSKERAKRHTQIVHYGLKKYKCNYCDERFEAFNVKLYHMNNVHNKNLGLSCPICDRIFITPSAVRQHVKSYHMLERSHLCEHCGKGFYTRAQLKSHEGAHEDRTIYTCDVCQSGFKNKSEYINHIKNHAEIECNTSQIITKDESKFTSAKSLKTADLFWTRRITRDTSTDTIDIKSKLSFEPKEITLKFAKDAKVAPKVVSPKSKRSTKTQGKSDFAVGSVQQRVAKRLAEIEHHLDNLRTILYNSNATPIKGMSGLDYCCCFCEEKFRDPADLKTHTLENHVGSYKTFMQEYSILDFMVKLDITGLKCTECSLEINGNLKELMDHLQLHYKYIHTDIKNHFVPFRFVDGIIPCVFCSAEHVHFKAALVHIREHYDNYICDQCNAGCVTYQQLRMHVKRHNVTGEEHKCKFCPKVFNTLCKVRDHERVTHIRSEKIAKCVFCDERFCSHGQKITHMMKVHGYKPTQLRCKACDMTFVTQSLFREHTKKFHLMEKNHECGTCSKKFFNTKILKNHLLTHTDVRDHQCVYCSKSFARKYSLTQHLRIHLNDRKFKCPYCDLTFIQKCSWKGHLLRQHNITATEYFDHPGRSTQSDSESELGDELKYQFEKSELESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -