Basic Information

Gene Symbol
Xbp1
Assembly
GCA_949987775.1
Location
OX465252.1:17202014-17204786[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7 1.2e+04 -2.3 0.1 17 25 29 37 28 38 0.76
2 2 9.5e-18 1.7e-14 55.0 11.4 2 65 42 105 42 110 0.97

Sequence Information

Coding Sequence
ATGAGCGCTCCGATAATAATCACCGTGCCCAACAACTACTTGGCGATGGAGGAGGTGGACTCGAAGGTGGTTGTGGACGTGCCACAGCCTTCGAGGAAGCGGCGGCTGGACCACCTCACCTGGGAGGAGAAGATGCAAAGAAAGAAGTTGAAGAACCGAGTAGCGGCGCAGACATCGCGCGACAGGAAGAAGGCGAGAATGGACGAGATGGAGAGCAACATCCACCAATTGATGGAGGCGAACAAGAAGTTGATGAATGAAGTGGCCAGCTTGAAGGCGTTGAACGAGAGGCTGGTGAGCGAGAACACGGCGCTACGcagcgcggcggcggcgcgggacGTCGCGGGGGCCCCCGGACCGGCAGAGTCCACTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGCTCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCACACCTCGAGTCCGAAGAATATCTCGATACCCTCAATCAACTTGCAGACTCCCTCCTCCAAGAAATTGATGCAAGTGCTGCAGGAGCGGCTCAAAATGTCACAGACGGGAACATTAGAGAGTGCCCTAAAGGAGCTGAAGTGGTGGGGTCCGCATCAGAGCACCTGGAACCCAGTGAAGGTGGCGACGTAG
Protein Sequence
MSAPIIITVPNNYLAMEEVDSKVVVDVPQPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKARMDEMESNIHQLMEANKKLMNEVASLKALNERLVSENTALRSAAAARDVAGAPGPAESTPQQKEGPPTALRAARLLLAMCLLSQTSSHTSSPKNISIPSINLQTPSSKKLMQVLQERLKMSQTGTLESALKELKWWGPHQSTWNPVKVAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
-
80% Identity
-