Atur044189.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apotomis turbidana
Gene Symbol
nfxl1
Assembly
GCA_905147355.1
Location
LR990300.1:15852531-15855002[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 1 5.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 22 0.026 1.5e+03 1.0 0.2 4 10 169 175 168 176 0.96
3 22 1.6e-07 0.0091 17.6 15.9 3 19 186 202 185 202 0.95
4 22 0.076 4.4e+03 -0.5 2.5 6 12 227 233 226 233 0.89
5 22 1.9e-05 1.1 11.0 10.7 3 19 239 255 237 255 0.91
6 22 0.38 2.2e+04 -2.8 2.2 6 10 280 284 279 284 0.83
7 22 1.6e-07 0.0093 17.6 12.6 1 19 290 308 290 308 0.98
8 22 5.7e-08 0.0033 19.0 17.5 3 19 345 361 337 361 0.86
9 22 0.96 5.6e+04 -4.0 0.7 1 4 370 373 370 373 0.94
10 22 1 5.9e+04 -5.3 2.2 5 10 384 389 384 389 0.88
11 22 3e-06 0.17 13.5 18.3 1 18 395 412 395 413 0.97
12 22 7.2e-09 0.00042 21.9 17.3 1 19 422 440 422 440 0.99
13 22 0.00013 7.9 8.3 8.7 8 19 487 498 479 498 0.84
14 22 0.014 8.2e+02 1.8 1.2 6 12 497 503 497 504 0.92
15 22 0.0075 4.4e+02 2.7 5.5 3 11 509 517 508 518 0.88
16 22 0.19 1.1e+04 -1.8 3.3 14 18 547 551 547 552 0.85
17 22 0.0025 1.5e+02 4.2 5.2 8 18 568 578 567 579 0.93
18 22 0.001 61 5.4 6.3 1 11 588 598 582 599 0.91
19 22 0.42 2.5e+04 -2.9 1.5 15 18 613 616 612 617 0.82
20 22 3e-05 1.8 10.3 13.1 3 18 629 645 628 646 0.91
21 22 1 5.9e+04 -6.5 3.4 9 13 652 656 652 656 0.71
22 22 3e-06 0.17 13.5 12.7 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCCCGGCGATACCGCGACGCCGCTGCGAAATTGCAGCAAAATGTTCAAAAACATTTGAAGGGGATGAAAGAACTTTCGTCGTCCGAAGATGAGGAGGCGTACGAATCGAGCATCCTGGAGGGTGTGCTGCAGAGCTACCGAAACGGTGGCGGCGACACACACATGCTCAACCGCACGAAGAACATGCTGGAAGAAGCTTTAAGCGGCCGCCCGGTGACTTGTCTTATATGCATAGGATCCATCAAACGCGCCCATCCCATCTGGACCTGCGACCATTGCCACTCATATTTCCATCTCTCTTGTATCCAGAAATGGTCCAACGACAGCATAAGCCTTCGTAGCGAGGAGAACCACGGCCCGATCGCAGTGGTTGTGCCTAAGAAGATAGAATGGTGCTGCCCCAAGTGTCGGCAGTCGTATAGCAAAGAGGAGATACCTCGCAAGTACCGCTGCTTTTGCAGCAAGACTGACGACCCTCCATTCCATCCATGGTTGATACCACATTCTTGTGGAGAAGTTTGTGGAAAAAGATTGTCAACTGGCGATAATTGCAAGCATAAATGTCTGTTGTTGTGCCACCCTGGTCCATGCCCACCGTGCCCTCAGACTGTTAACGGTGTCTGTTTCTGCGAAAAGGAAAGAAAACGGATTCGATGCAGTGCGGCTAAATGGTCTTGTAGTCAACAGTGTCATAAATTACTCACCTGCAAGTCCCACAAGTGTCAAAACCTGTGTCATCAAGATGCCTGTCTACCATGCACCTACACTAGCGTTCAGACGTGTCTGTGTGGGGCTGAGAAGGTCAAACGACCCTGCAATGATCCTGTATGGCAATGCCAGAAGCCCTGTAATAAGCCATATTCATGCAGTTATCACAAGTGTGAAGAAATATGTCATTCTGGAGGTTGCGGTGACTGCCCCAACTCTGGTATGCGGTCCTGTCCATGTGGAGCAAATCAACGCTTTGTTCAGTGCCCTGATGTCATGGAGACCTGTATGGGCACCTGTGGAAAGACCCAGAATTATTGTGAACATACCTGCCCTGAGAAATGCCATAAAGGCCCCTGTCCACCTTGTCAAGTGCTGATAGAAAAGAAGTGTCAGTGTGGCACTCATGTCAGGTCTTTACCATGTAGTAAGGAATATAAATGTGAAACAAAGTGTCGAGGCATAAGGCCGTGTGGGAAACATGGCTGCGCACGGAAGTGCTGCAATGGAAACTGTCCACCATGTGAGAAAACCTGTGACAAACCGCTCCAGTGTGGCCGCCACAAGTGCACCACGGTCTGCCATCATGGCCCCTGCTACCCTTGTCCTAGAGAATCCAAAGTCACTTGCAGATGTAAAGAGACCTACGTAACAGTTCCATGTGGAAGAGAAAAGCATACTAAACCACCTAAATGCAGTATCTTGTGCAAACTTAAATATAAGTGTGGACACACTGAACAGAACAAGCACCCTTGCCATTTTGGTGATTGCCCACCTTGTAAAGCAATATGCCATAAACAATATGAAAAGTGTGAGCATGATTGCAAAGCTGTCTGTCATGCTTTTGTAACAGTTGTATTTAAACAAGTAGAGAAGCCCGCCACACCCTGGGAAGTGCAACCACCTAAGACCAAAGTTATGACTCTTGAATGTCCGCCATGTGAGATTCCTGTTCCGATTATATGCTTCGGGGAGCATGAGACAGCAGATCAGCCATGTCACTCTGCATCATGCCGGCCTTGCGGGCGCGAGTGTGGCCGGGAGCTCTCTTGTACCAGACACAAGTGTAAACTGCTGTGCCATTTGCACAAGCCCGATAGCAACTACCCTAATGTTCCTTCATCATGTGAGCCCTGCAACAGGGAATGCTTAATTCCTCGACCAGAGAAGTGCAACCATAAGTGTGCTAAAGGTGTTTGCCATCCAGGTGCCTGCCCGTCTTGTGAGATCATCGAAAGAATCCCATGTCACTGTGGTGTAACGGAGCTCTACTTACGGTGCCGTGAACTTAGTACCGCTTCAGATGAAATGCTATCATGTAAACAACAATGTCCTAAGAACTTGGAATGTGGCCATCGGTGCAAGAACTTATGCCACCGAGGTACCTGTGGGCAGCAGGTCTGCACCAAGAAAACCAAAGTCTACTGTCCCTGTGGCAACTTGAAGAAAGATGCTCCTTGCAATGTTGCAAAGAGTGGGGAAGGCACACCTTCCTGTGACTCAACTTGTGAACAAAAACGCATTGCAACTCAGTTAGAAAAGGAAAAGGAGGAAAAGAGAAGGAAAGAGATTGAGGAAGAGAAAAATCGTAAGGAACTAGCGGAATATGAATGGAAATTAAGTGGaaagaagaaaaaatacaaGGAAAAGAAAGTGGTGGCTGATAGAGATGACCGGAATCTGCTGCAAAAGTATTGGATTCCTCTAATCTCAGTCTTAATTGTTATTTTAGCtggtttttatttcatattttatgtgTAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKGMKELSSSEDEEAYESSILEGVLQSYRNGGGDTHMLNRTKNMLEEALSGRPVTCLICIGSIKRAHPIWTCDHCHSYFHLSCIQKWSNDSISLRSEENHGPIAVVVPKKIEWCCPKCRQSYSKEEIPRKYRCFCSKTDDPPFHPWLIPHSCGEVCGKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCFCEKERKRIRCSAAKWSCSQQCHKLLTCKSHKCQNLCHQDACLPCTYTSVQTCLCGAEKVKRPCNDPVWQCQKPCNKPYSCSYHKCEEICHSGGCGDCPNSGMRSCPCGANQRFVQCPDVMETCMGTCGKTQNYCEHTCPEKCHKGPCPPCQVLIEKKCQCGTHVRSLPCSKEYKCETKCRGIRPCGKHGCARKCCNGNCPPCEKTCDKPLQCGRHKCTTVCHHGPCYPCPRESKVTCRCKETYVTVPCGREKHTKPPKCSILCKLKYKCGHTEQNKHPCHFGDCPPCKAICHKQYEKCEHDCKAVCHAFVTVVFKQVEKPATPWEVQPPKTKVMTLECPPCEIPVPIICFGEHETADQPCHSASCRPCGRECGRELSCTRHKCKLLCHLHKPDSNYPNVPSSCEPCNRECLIPRPEKCNHKCAKGVCHPGACPSCEIIERIPCHCGVTELYLRCRELSTASDEMLSCKQQCPKNLECGHRCKNLCHRGTCGQQVCTKKTKVYCPCGNLKKDAPCNVAKSGEGTPSCDSTCEQKRIATQLEKEKEEKRRKEIEEEKNRKELAEYEWKLSGKKKKYKEKKVVADRDDRNLLQKYWIPLISVLIVILAGFYFIFYV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00023391;
90% Identity
iTF_00411076;
80% Identity
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