Atur002017.1
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- GATA-B
- Assembly
- GCA_905147355.1
- Location
- LR990280.1:29003228-29006708[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-18 1.9e-14 54.6 3.0 1 34 11 43 11 45 0.97 2 2 1.6e-18 9.6e-15 55.5 6.1 1 34 154 186 154 188 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGATTTTCACGGAGGGGCGCGAATGCGTGAACTGCGGCGCCATCGACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTATCTGTGCAACGCATGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCCCAAGCAGCCTCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCCATGCCCGCGCCCGCCCACGACAGAAATCCGCGCCCCGTCGAGCGTCCACATCCCCGACTCGTAGTGACAGTTATATTAGTTGCAGTGGCCGCGGAGGGGACCCCGCCGGGCGCGGATTTCTACAAAGGCTTCCTGTATAACGGCGTCGCGTCGCCGCACGCGCACTCTatgcccgcgcccgcgccgctgtGTGCGTCGTCGCACGCCGGCCCTTCCCCCTCTGACTACAAAACGAAGAAAGGGATGGGCACGAAGAGGCCGGGGTTGTCGTGCAGCAACTGCCACACGACGATGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTGTGCAACGCCTGCGGCCTCTACTACAAACTTCACAACATTAACCGCCCCATGGCCATGAAGAAGGATTCCATACAGACAAGAAAGCGCAAGCCAAAGAACAGCCTTAAAGCAGAACGAAATTTGAAGAGTTTAACCCAACACGCACACTCCACTGGAGTGAAGATGGAAACTCTTTTGGACGCGGGTGCGACGGTAGCTTCGACCGTGGGCGAGAGCAGTCGGTCGTCGCTGGCGCTGGGCTACTACGTGCAGCAACAGCTGAAGCGCGAGGAGCCGCCGCCGGCGCACGGCGGCGCGCTCGGCCaccacgcgcacgcgcacgcgcccgCTCTGCTCCACCACGTGCACGCGCAGCAACTCTACGACGACGAGTACCGACGCGCTGCCCCCGAGCCCGCTGACCGCCTCGAGCGGCCCACCGTCGTCTCCATCGGCAGCTGA
- Protein Sequence
- MAEIFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYNKMNGMNRPPKQPRRLVRQRHAAHAMPAPAHDRNPRPVERPHPRLVVTVILVAVAAEGTPPGADFYKGFLYNGVASPHAHSMPAPAPLCASSHAGPSPSDYKTKKGMGTKRPGLSCSNCHTTMTSLWRRNAHGETVCNACGLYYKLHNINRPMAMKKDSIQTRKRKPKNSLKAERNLKSLTQHAHSTGVKMETLLDAGATVASTVGESSRSSLALGYYVQQQLKREEPPPAHGGALGHHAHAHAPALLHHVHAQQLYDDEYRRAAPEPADRLERPTVVSIGS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -