Basic Information

Insect: Apotomis turbidana
Gene Symbol: THAP3
Assembly: GCA_905147355.1
Location: LR990305.1:5920081-5935081[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 5.9 6.6e+02 2.7 0.4 1 10 397 406 397 419 0.72

2 10 0.45 51 6.2 0.7 1 23 426 449 426 449 0.93

3 10 0.64 72 5.8 0.2 1 23 453 475 453 475 0.92

4 10 0.007 0.79 11.9 1.0 1 23 480 503 480 503 0.98

5 10 0.0047 0.53 12.5 0.7 1 23 507 530 507 530 0.96

6 10 0.22 25 7.2 0.2 2 23 616 638 615 638 0.96

7 10 0.016 1.8 10.8 0.5 2 20 654 672 653 675 0.92

8 10 9.3e-06 0.0011 21.0 2.5 1 23 681 703 681 703 0.99

9 10 0.0004 0.045 15.9 2.8 1 23 710 732 710 732 0.98

10 10 0.00019 0.022 16.9 3.0 1 23 738 761 738 761 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	5.9	6.6e+02	2.7	0.4	1	10	397	406	397	419	0.72
2	10	0.45	51	6.2	0.7	1	23	426	449	426	449	0.93
3	10	0.64	72	5.8	0.2	1	23	453	475	453	475	0.92
4	10	0.007	0.79	11.9	1.0	1	23	480	503	480	503	0.98
5	10	0.0047	0.53	12.5	0.7	1	23	507	530	507	530	0.96
6	10	0.22	25	7.2	0.2	2	23	616	638	615	638	0.96
7	10	0.016	1.8	10.8	0.5	2	20	654	672	653	675	0.92
8	10	9.3e-06	0.0011	21.0	2.5	1	23	681	703	681	703	0.99
9	10	0.0004	0.045	15.9	2.8	1	23	710	732	710	732	0.98
10	10	0.00019	0.022	16.9	3.0	1	23	738	761	738	761	0.93

Sequence Information

Coding Sequence: ATGCGGTGCAGCGTACAGAACTGTTCTAACGACACAAAACGAACAACAAAAAGCCATGGGATTACATTTCACATGTTTCCCAAAGAGCCTAATCTGCGGAGTGCTTGGATGGAGGCACTCGGAATCTCTGACTGGGAGCCAAAGGACCGAAGCACGATATGCTCGGAGCATTTCCGGAATGAAGACTTCTATGAGACCAAGTGTGGGCTGCGCAAGATCAAGAATGGTGCGGTGCCTGTCGTGGGTCAGGGTTTAGCAGATGACTTGGATGCTCCAGCCGCTTTAAGGGTGTGCAGAATATGTCTAGCAACAGACAGCAAGATGTACAACATCAGGGATTACAAGTTGGAACAGGCGTTCGCCGAAGTTAGCGGAATGACGATGGGTGACGAAGACAAGCTGCCGCAGCGATTATGCTGGGAGTGTTGCTGGCGGTTGCTGTCGGCGGCTCGTTTCAAGGGCAAAGTACTGAGAGCCCACGATCTCCTCACTGGCCTTCCTCACACCGGACCATATATCACAATACGCGACATCCGCTCTATAAACCGCAGACAAAACCAGCTAAGATCCCAGCTCACGTACCGACATCACGACCCTAACGACTGCCACATACACATCAAGGatgaccaaatcatcatcaagtCTGAAACCAAAGACACGGAAGAAATTGACGAAAAAGTACCACCCATAGCCGAAGTTGAACTAATAAAAgacgaaaaaaacaatacagATTTGTTTTACGATGAATTCGATAATTACGACGGGAATGATTTTAATAACGAGTGTAATGACAATGAATATGGTAATGATAATACTGAATTCGTTAATGATAATAGTGGATTCATTAATAATACTGCAGATAATGATACAGTTAATGGTAGTGCGGCTTTGTGTAATGATGTGGAAGCTGCTGATAGTGACGATAAAGTGCTGAGTGAAGTGTATGTGAAGAAGAAGCGGAAAGTTAAAAAAGTTAAAGTGAAAAAGAAGGAGAAGGTTGTGAAGAAGAAAGAGGAAGAAGATAATCCCATGACCACTATGGATAAGTACAAAAACTCGGACGTGAAACGTCGCAAAACCACCGACGGGCTCGACGAATCGCTCTTCACCATCACAACTCTCAGCTACGACGAGCAAATAGCCGAGATCCAGAAGCGACAGGAGAGCACGAACTACAagagcgctccatacaaatgctCTGTGTGCTACCGCGGGTTCTTAGTACGAGATCGGTACGACGCGCACGTTGTGAGACATAGCGAGcaATCCGGTGCGTACGAGTGTTTCATATGTAAGAGCCGGCTGAAGAGCGGCCGTGCGCTACGTAAACACTTAACTGCCCAGCACACGGAGAAATTTAGCTGCAAGGGCTGTCCTTTCGTCACAAGAAACAGGGGTGTAGCACGTGAACATGAAAAATGGCACGCCGGTACGAAATATCAGTGCCCGCACTGTCCAAGCGAGTTCGAcAAACTGACGACATACATGGGCCACATTAGGATAAAGCACGTGTCAGATTTCGTGTGTGAACTGTGCGGCTACACGTTTGTGAGCAAGAAGGGTATCGACGTgcacaagaagaagaagcacCGGCTGGCTGACAAGACGGTGACGCTAGAAGGTCCGTACTGTGACACTTGCGAAGTCCGCTTTGTGTCGGAAGAGGCGCACGCGCGACACCTTAAACTGTCGTCGCGACACAGCAGCGACAGCGACCCgAACAGGATCCGGAATGACTCGCAAAGCATAAACGCAGACAAGAATGGCAGAGTGATCCGGAAAGTGGAGCGTCGGCCGGTCATACATGCTCGCGACGGGGAACGACAAGACATCGGCGGTCCAGTGTCCTGTGAACAGTGCGGCATCCAACTGCGGGATCTCCGGCTGTACGCGCAGCACTTCCGGCGCGCGCACCCCGACAAGAACCGCACCAAGTACCCCGCCATGAAGACGCCGTGCATGTGCGAGCAGTGCGGCAGAATCTTCCAGAGCATGGCGCTCCTAAAAGACCACATGTGGGTGCACACCGGCGAGAAGCGGTTCAAGTGCGACCGCTGCGACAAGAGCTTCACGCAGAAGACCAACCTGGTGTTCCACATGCGCGTGCACAGCGCCACGCGCCCGAGCTACGAGTGCCCCTTGTGCGGGAAGCACTTCGCCTTCTTCAACAACCGAAGGAGACATATGTTTATTCACACCGGCTTAAAACCGTTCAAGTGTGAAACATGCGGCAAGTGTTTCACGACATCAGGCGAGCAGCGCGCACACGTCGAGCACGTTCATCTTAAAAAACCTTGGCCCAAGCGCCAGCGGCACAGGGACGGCGAGCCAGCGCCTTGGCAGAAGTGCCTAGACCCTATGGAAGACTAG
Protein Sequence: MRCSVQNCSNDTKRTTKSHGITFHMFPKEPNLRSAWMEALGISDWEPKDRSTICSEHFRNEDFYETKCGLRKIKNGAVPVVGQGLADDLDAPAALRVCRICLATDSKMYNIRDYKLEQAFAEVSGMTMGDEDKLPQRLCWECCWRLLSAARFKGKVLRAHDLLTGLPHTGPYITIRDIRSINRRQNQLRSQLTYRHHDPNDCHIHIKDDQIIIKSETKDTEEIDEKVPPIAEVELIKDEKNNTDLFYDEFDNYDGNDFNNECNDNEYGNDNTEFVNDNSGFINNTADNDTVNGSAALCNDVEAADSDDKVLSEVYVKKKRKVKKVKVKKKEKVVKKKEEEDNPMTTMDKYKNSDVKRRKTTDGLDESLFTITTLSYDEQIAEIQKRQESTNYKSAPYKCSVCYRGFLVRDRYDAHVVRHSEQSGAYECFICKSRLKSGRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLADKTVTLEGPYCDTCEVRFVSEEAHARHLKLSSRHSSDSDPNRIRNDSQSINADKNGRVIRKVERRPVIHARDGERQDIGGPVSCEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCDKSFTQKTNLVFHMRVHSATRPSYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCETCGKCFTTSGEQRAHVEHVHLKKPWPKRQRHRDGEPAPWQKCLDPMED*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00325875;
90% Identity: iTF_00772957;
80% Identity: iTF_00149467;