Basic Information

Insect: Apotomis turbidana
Gene Symbol: zfh1
Assembly: GCA_905147355.1
Location: LR990285.1:28769879-28777348[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.019 2.1 10.6 0.4 1 23 75 97 75 97 0.95

2 8 9.8e-06 0.0011 20.9 1.9 1 23 108 130 108 130 0.97

3 8 2.7e-06 0.0003 22.7 6.2 1 23 139 161 139 161 0.99

4 8 0.00019 0.021 16.9 1.0 1 21 167 187 167 188 0.95

5 8 1.1 1.3e+02 5.0 0.0 5 20 451 466 448 468 0.91

6 8 1.4e-05 0.0016 20.4 1.1 1 23 766 788 766 788 0.94

7 8 8.8e-05 0.01 17.9 7.2 1 23 794 816 794 816 0.98

8 8 0.1 11 8.3 7.1 1 21 822 842 822 843 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.019	2.1	10.6	0.4	1	23	75	97	75	97	0.95
2	8	9.8e-06	0.0011	20.9	1.9	1	23	108	130	108	130	0.97
3	8	2.7e-06	0.0003	22.7	6.2	1	23	139	161	139	161	0.99
4	8	0.00019	0.021	16.9	1.0	1	21	167	187	167	188	0.95
5	8	1.1	1.3e+02	5.0	0.0	5	20	451	466	448	468	0.91
6	8	1.4e-05	0.0016	20.4	1.1	1	23	766	788	766	788	0.94
7	8	8.8e-05	0.01	17.9	7.2	1	23	794	816	794	816	0.98
8	8	0.1	11	8.3	7.1	1	21	822	842	822	843	0.96

Sequence Information

Coding Sequence: ATGAAAGTGCAGAGCTCGCTTATGGGAGTTGGCGGTTTGTACGAATGCTTGGCGGCCGGTTGGCTTGCGGACATGAGGAGTAAGCAGGTCCCCACATCTACCACCTCCGCCAGGCTCGCGGCCTTAATCCGCCCCCTggcgggcgggggcgggggcggggaaGGCAAACCGCCGGAGGAGGAGGAGGACCGTGGCGGGTCGCCGCTGGGTCCGGGCGGGCCCTTCACCTGCAGCCAGTGCCGCGGCGCCTATCCTACGCGCGAGCAGCTCGAACGCCACGAGACCCTGCACTCGCCCAACACTCAGGTGGATACCATCAAATATGCATGCAAGATCTGCCACAAAAGCTTCGCGAACGTCTACCGATTGCAGCGCCACATGATCAGCCACGATGAGAGCGCAAACCTGCGCAAGTTTAAGTGTAACGACTGCGATAAAGCCTTCAAGTTTAAGCACCATTTGAAGGAGCACCTCCGAATACACTCCGGAGAAAAGCCCTTCGAATGTGCAAACTGTGGGAAGAAGTTCTCTCATTCCGGCTCCTACTCCTCGCACATGACTTCTAAGAAGTGTCTAGTCATGAATCTTAAGATGGGCCGTATCAAGCCCAATAATCCCGCGCTGAATCCCGACCGCAGCCCCTCGCGTAAGCGCGCCAACGCTATGGTCGCCAGCCAACTCAATAACAACATCGCGCCGAACGGAAGCTCGTTCCTACCCATTCTGCCTAAATATAATGAGGCGGCGTTCTTCGCCAACATGTCACAAGATAACAGTTTTCATCGCTCGCCGCTAGGGAGAATGCCATTTTATATGCCTCCCGGTATGCCCATGAGCCCGGCGAACGGCATTGCCCCCTATAGCTTTCCAGCTTCACTGACCCAGCTATTTGAGCAAATTGCTTCGACGCAATATCATCAAAGGAAAATAGAAAATCCCATTAGCCCGAAGCGGAGCCCTCAACCGGCTGACCCCGAGGACATGATCGAAGAAGTAACTGAAGAGGATGACAAGCGGTCGGAGGGAAGCGCCGAACTAGTTATGGACATCGAGGATGAAGAAGCAGTGTCGATTAAGAAAGAACGAGAGGAACGAGAATGTGATTTGAGATCACCAACTCGTAATTTGGATTCCGTCCCTTTAAATAATAATGGCCCCGAAGCTGAGAACAATCACtcgaatttcaatacaatattagAATCCGTTAGCGCCTCGGTAACCAAACATTTCTTTAGAGCTAATATAGACAAAATGTCTCCTATGTCTGGCAGCATCTGCCCGAGTATAGAGTCACCACCAACCCCACACGTCATCATCAAAGATGATCCCGATGAAACACACAAAAGTCTAAAATGTAATGCTATCTTCATAAACAAAAGTGATCTATTGGATCACGAGAAGGCGTATTGTggaaatataataacatttagaAAACACGAAGGATTGGCAGCTCAAGTAGAGGAAACCGTAGCGCTCAATAGACTAGAAGCTGAAATGCGAGCATCTATCCAAAGCGGAGTCAGTGCAAGCGAAGATGAAGACTTTAGTCGAGACGACCGTGACGAGAAAGGCTCTGTGCACGATGGGGACAGGAAAATCAGAGTCCGAACAAATTTAACCGACGAACAGCAGGCGATTTTGAAGGAACACTACGCAATCAATCCCCAGCCAAAACGGGAAGAATTCAAAAAGATAGCTCAGCAAATCGGTCTCCACAATAGAGTAGTTCAAGTCTGGTTCCAAAACAACCGGGCTAGAGTACGAAGAATGGCTCAAACCGTACCGGTGTACGACCAGCCCTTGGACTTGTCTACAAAGAAGTCTAACGCATCGGTGACATCCAGCCCATCCCCGTCGCCACCTTGCAGCATTTCTGTCACACATTCCGACTCCGAGGAAGCAGTCAATCTGAGCCAGAAGTCCTCTCGCAGCACAACGCCCCACCGCAACAATTACCTGAACGCATACCCACATTCCAATTGTTCTTCGTCTTCGTTCACCGACTTTCGCCTATCGCCCTCTCCAGGAGAGACCATGGGCGCCCAGAAACGGCTTCTGACCCAGAGGTTGAATCCCACTATACCAATGGATAAACTGTTACAATACAACGATATGGCAAACACGCGGTCTCCGATGCTCAACATGCTTCCCGACGGCCGCGCACCAGGGCTGAGTCCGTCGTACGAGCGACCCCTGTGGGGGGAAGAAATGCTCGCCCCCAACGACTACGATGACGAAGGGCCTGTACTTAAGAAGAATAAGCTCAAGCTCGAATTCAAGGAGGGCGAGGGCCAGTTCGTTTGCGACCAGTGCGATAAGACCTTCGTCAAGCAAAGCTCGCTGGCGCGGCACAAGTACGAACACTCAGGTCAGCGTCCGTACAAGTGCGTAGAGTGCCCGAAGGCGTTCAAGCACAAGCACCACCTGACGGAGCACAAGCGGCTGCACACCGGCGAGAAGCCCTTCCAGTGCTGCAAGTGCCTCAAGAAGTTCTCGCACTCCGGCTCCTACAGCCAACACATGAACCACCGCTTCGCCATCTGCAAGCCTTACCGAGACTAG
Protein Sequence: MKVQSSLMGVGGLYECLAAGWLADMRSKQVPTSTTSARLAALIRPLAGGGGGGEGKPPEEEEDRGGSPLGPGGPFTCSQCRGAYPTREQLERHETLHSPNTQVDTIKYACKICHKSFANVYRLQRHMISHDESANLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPDRSPSRKRANAMVASQLNNNIAPNGSSFLPILPKYNEAAFFANMSQDNSFHRSPLGRMPFYMPPGMPMSPANGIAPYSFPASLTQLFEQIASTQYHQRKIENPISPKRSPQPADPEDMIEEVTEEDDKRSEGSAELVMDIEDEEAVSIKKEREERECDLRSPTRNLDSVPLNNNGPEAENNHSNFNTILESVSASVTKHFFRANIDKMSPMSGSICPSIESPPTPHVIIKDDPDETHKSLKCNAIFINKSDLLDHEKAYCGNIITFRKHEGLAAQVEETVALNRLEAEMRASIQSGVSASEDEDFSRDDRDEKGSVHDGDRKIRVRTNLTDEQQAILKEHYAINPQPKREEFKKIAQQIGLHNRVVQVWFQNNRARVRRMAQTVPVYDQPLDLSTKKSNASVTSSPSPSPPCSISVTHSDSEEAVNLSQKSSRSTTPHRNNYLNAYPHSNCSSSSFTDFRLSPSPGETMGAQKRLLTQRLNPTIPMDKLLQYNDMANTRSPMLNMLPDGRAPGLSPSYERPLWGEEMLAPNDYDDEGPVLKKNKLKLEFKEGEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHTGEKPFQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00462280;
90% Identity: iTF_00149268;
80% Identity: iTF_00149268;