Basic Information

Insect: Apotomis turbidana
Gene Symbol: ham
Assembly: GCA_905147355.1
Location: LR990296.1:9374059-9442402[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.12 14 8.0 0.0 2 23 1073 1095 1073 1095 0.94

2 9 0.0024 0.27 13.4 0.6 1 23 1102 1125 1102 1125 0.93

3 9 6.1e-08 6.9e-06 27.9 0.1 1 23 1131 1154 1131 1154 0.96

4 9 5.2e-06 0.00059 21.8 1.7 1 23 1160 1182 1160 1182 0.95

5 9 0.00015 0.017 17.2 7.1 1 23 1188 1210 1188 1210 0.99

6 9 0.0046 0.52 12.5 0.4 2 21 1218 1237 1217 1238 0.94

7 9 4.4e-08 5e-06 28.3 0.7 1 23 1640 1662 1640 1662 0.98

8 9 1.6e-06 0.00018 23.4 1.7 1 23 1668 1691 1668 1691 0.97

9 9 1.7e-05 0.0019 20.2 3.7 1 23 1697 1719 1697 1719 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.12	14	8.0	0.0	2	23	1073	1095	1073	1095	0.94
2	9	0.0024	0.27	13.4	0.6	1	23	1102	1125	1102	1125	0.93
3	9	6.1e-08	6.9e-06	27.9	0.1	1	23	1131	1154	1131	1154	0.96
4	9	5.2e-06	0.00059	21.8	1.7	1	23	1160	1182	1160	1182	0.95
5	9	0.00015	0.017	17.2	7.1	1	23	1188	1210	1188	1210	0.99
6	9	0.0046	0.52	12.5	0.4	2	21	1218	1237	1217	1238	0.94
7	9	4.4e-08	5e-06	28.3	0.7	1	23	1640	1662	1640	1662	0.98
8	9	1.6e-06	0.00018	23.4	1.7	1	23	1668	1691	1668	1691	0.97
9	9	1.7e-05	0.0019	20.2	3.7	1	23	1697	1719	1697	1719	0.98

Sequence Information

Coding Sequence: ATGGGCCAGTATAAGGGAGAGCCAATTCATTTGGAAATCGATGCAAACGCTCGACCAATCTTTATGCCGGTGAGAACTGTACCATTCGCCTTGAAAGACAAGGTAAAAGATGAAATTGCTAGGCTAATTGAAAACAAGCGAATTGCGCCCGTTGAATATGCAGACTGGGGCACACCAGTTGTACCTGTCTTAAAGCCGGATGGTTCAGTACGTAGGCTTAAATGGTGCCAGAATCATCAGGACCAAATAATAATGGACAAACTTGCTTCTCATCAATCcaattatgattttagtagtTTTTGGAAACATACCAACAGGTTAAACACATCGCATAATCTCCCTGTGAGCGTCGAGGGCGTGGCTGAGGGGCAGGATATAGCAAACCTTTTTAAGGACCATTTTGCTGTCAAGTCTCCTCTGGGGCGGGCGCGCAGTGACGGTATTGAGCCCCCTCATGGAGCGGTTCCCAGTCTGATTAAAGCGGCTGATATTCGTGACGCATTGCGAGGAATGAAAAAAGGGAAATCGCCGGGCCATGATGGGCTCAGTATCGAGCACTTACGACACGCGGGAGAGCACTTGCCCAGAGTGCTGGCTTTGCTATATAACCTGTGTCTCAGCCATTCCTACCTGCCGCCATCACTCATGCGTACCTTAGTGGTGcctattgtaaaaaataaaacaggtgaTGTATCAGACAAGTCGAATTATAGGCCCATTTCGCTTGCAACTATCGTAGCGAAGGTGCTTGATAGCGTGCTCAATACACGTCTAGACGAGTACGTACAACTGCACGACGCTCAGTTCGGCTTTCGACCGGGGTTGTCCACTGAAAGTGCCATTGTGGTGTTGAAGCATGCTGTCAAGTATTATACGGAGAGGAAGACGTCGGTATTTGGTTGTTTCCTAGACCTCTCAAAGGCATTCGACTTAGTCTCGTACGACATCTTGTGGGCCAAACTGAAGTCAACCGGATTGCCAGTAGaccttttattaatttttcagcATTGGTATGGTAATCAGATCAATGTTGTGAAGTGGGCGAATGCACTGTCCTCACCGTATGTACTCGAGTGCGGAGTAAGGCAAGGGGGGCTAACATCGCCCAagctatttaatttatatatgaaTGCACTAATCGAGGAGCTAAGCGGCGCGCATGCAGGTTGTTTTATAGATGGGATTAGCCACAACAACATTAGTTACGCCGACGACATGGCGCTGCTAGCGCCGTCGGTCGGTGCACTCAATGAATTGATTAGCATTTGCGAAAAATATGCTATTGCTCACGGGCTCGTGTACAATGCGAAGAAGACAGTGTATATGGTATTTAGGGCTCCAGGCATGGAAGCCCCGGATGTATCACTTCCGGTCTTGTTAAACGGGGCTCCAGTCAGCAGAGTCAGCCAGTTCAAATATCTAGGCCACTATTTGTCTGACAACTTCAAGGACGATGTGGATGTCGAGCGGGAACGCAGGGCGCTGGCGGTTCGAGCGAACATGCTGGCTCGCAGATTCGCTCGGTGTACGGCTGCAGTCAAAATAACTCTTTTTAGAGCATACTGCACGTCGCTGTACTCGGGTGCTCTGTGGGTGAACTGTTCGCAACGGTCGCTCAGCTCTCTGCGCGTCCAATATAATAACGCCTTCAGGGCGCTGTTGGGACTGCCACGATTCTGCAGCGCGTCCGCCATGTTTGCTGAAGCTCGAGTGGACAGTTTTTCTGCTGTACTGCGTAAAAAGATGGCATCTCTTTTGATCAGAATACGTGGCAGCTCAAACAGCCTCCTGAAGACCATTGCTTTAAGAGCAGGCGACAGCCAGGAGTCAGGCAGCCCACCGCAGAGTCCGACTGACTCTGCTACATCTGAATCGCCGCCCACCTTAGTTCACATCAAACAAGAAACTATGCCTCCCGGCGTAGACGTTAAGGACTACTATAGCACACTAGACTACCGCTTATCGGACGCATATCTCTCTCCAAACTTCTCGGAATATGGACGCGGGTATCTACCGGGTAACTTGGAACTGCCAAGGTACGACCCGAAAAATCCTAAAGAGATAGACAAATGTGGAAAAGATAAAGACGTTGAGAATGAGTTGAATCTGCCGATAGAACTGTCGATAAAGAACGGAGGAGTGTTTGCTAGAGTTAACATTCCTAGTGGGACGAAATATGGACCTTTTGTAGGGAAGTGGGAGACGCAGCCATTGGACACGAGATACGCTTGGGAGGTGCTCGGCAAGAACGGGATCCGAGGATGGCTGGACGGCACCACCGAGAAGAGCAATTGGCTGAAGCTGGTGCAGTCCACCAACTACCCCCAGGATGTGAACACCCAGCACCTACTGCTGGCCGGTCAAGTATGGTACAAGGTGACGCGAGACATCGTCTCCGGGCAAGAGCTCCTCCTGGGTCCCAGGACCCCTCTGCCGCTGCAAGACGTTCAAGCTGCTGCTAGTCGGCAAGCGCCTAGCGTCAATCCATCTGGCGTGTCCCTATCCATCAACGACGACGAAGAACGTGAGGATACGGAGCCACGCTGCTCCTTCTGCGACGCCCCCTTCCCTAATATTGACGCTACAAAAGCGCCTAGTGTCAATCCATCTGGCGTGTCCCTATCCATCACCGACGACGAAGAACGTGAGGATACGGACCCACGCTGCTCCTTCTGCGACGCCCCCTTCCCTAATATTGACGCTGTCAATCCATCTGGCGTGTCCCTATCCATCATCGACGACGAAGAACGTGAGGATACGGAGCCACGCTACTCCTTCTGCGACGCCCCCTTCCCTAATATTGACGCTGTCAATCCATCTGGCGTGTCCCTATCCATCATCGACGACGAAGAACGTGAGGATACGGAGCCACGCTACTCCTTCTGCGACGCCCCCTTCCCTAATATTGACGCTACAAAAGCGCCTAGTGTCAATCCATCTGGCGTGTCCCTATCCATCACCGACGACGAAGAACGTGAGGATACGGACCCACGCTGCTCCTTCTGCGACGCCCCCTTCCCTAATATTGACGCTGTCAATCCATCTGGCGTGTCCCTATCCATCATCGACGACGAAGAACGTGAGGATACGGAGCCACGCTACTCCTTCTGCGACGCCCCCTTCCCTAATATTGACGCTACAAAAGCGCCTAGTGTCAATCCATCTGGCGTGTCCCTATCCATCATCGACGACGAAGAACGTGAGGATACGGACCCACGCTGCTCCTTCTGCGACGCCCCCTTCCCTAATATTGACGCGCTAGACCGCCACCTGATCCAGGCGCACGCGCAGCCGGCAGCCGCGTTCCATTGCGAGCTCTGCAACCGCGCGTACAGCTCCCGCGCACTGCTGCTTCGACACCGCGCGCTTGCGCATACTGACATCAGGAAATACCCGTGCGAGAACTGCCCCAAGGTATTTACCGATCCTTCCAACCTCCAGCGCCACATCCGCGCGCAGCACGTCGGCGCGCGCAGCCACGCCTGCCCTGAGTGCGGGAAGACCTTCGCCACTTCCTCGGGCCTGAAGCAGCACACGCATATCCACTCCAGCGTGAAGCCCTTCCAGTGCAAAGTGTGCTTCAAGTCGTACACGCAGTTCTCCAACCTGTGCCGACACAAACGGATGCACGTCGCCTGCCGAGCCCTCGTGGAGTGCGGGAAATGCGGCAACTCCTTCAACTCTTACGCTTCTCTTACTAAACACAAGAGATTCTGTGACACTGCCAGCGCCAACGTCAGCCTACGAGGACAAATGCCGCAAGGACTGTCCCAAATGCCGTCCCTGCCCAATATAGGAATGAATAATCATGGGAATCCTAATCCTTTCCCGATGTATAGGGGACCAACTTTGCCGCTACCATACAATACCTTTGCTCAATATCCAGGTCTATTTTCTGCGGCGGCCGCAGCGTGCCCTCCAGAATTCTTGAATCCGCTCCTGTTTAATGTTCAAGGAGCAAGGCTCGCTATGGAGCATGATTTTGCACTTACAAATGCAAGTATATTGTCAAAGCACCAGGAAGGACGGATGTCAGTTAAAAGCGTTGACAGTTCAAATTCGCTTGACGATATGATGAAGAAAAGCAAGGATTTAGACTATGAATCGCTTAAGCGGGACAGCGATACAGGAGACAGGACCACGCCAAATAAAACACACGAACTTACTGTGAAACAGTCTCCTCCTTCAGTCGAAGATGTCTCTTCACAGCCGCGACCATCACCCGTGATGAGCATGTCGACGCCCATTAATCTTTTCAGGGACTTTGCCAGAGATGATATGAAACACCAAAAGTCGCCATTCAACTTCTCGCTAAAGCTCAGCAATAATACCATCCAGGGAAATAAGTCTCATTCACCATTCCCTACAGACTTATCTAAGAATGATGCAAATGATGATGACAAAAACTCGGACTACTCAGACACCGAAGTGGAAATAAAGAAGGATTATGGTGATCAGCCTCTTGACTTGTCAGTTTCCCGGAAACAAAGCGACAAAGATTCCGAAGCCGATGTCGATGATCGTTCCTTTCGTAACTCCTCTGTCAAGTCGTATTCACCTCCCGAAAGTCCAATGGAGCGCGACAGCAAAACTCCCGAGAATGAAACCGCGGATATCGATGTGGAGGGAGTAGAACCGAAAAGAGAAGACTCCCCTCCGCAGCTGGTGTCGCCGCAGCTCGCGTTCCCAATGCCAGTGCACCCGCAACACAACAGCAGCCTCATCGAAGCCATGTACCGGCCGAGATTTCCGTCCTTCCACTCGGCGTCTGATTCGATCCTGAACTCCTCACCTTACGTTCCGACGCCGTTCAATTTTTTATCCCCACTTCTCGGCACCGACGGCCCCGATAGGCAACCGAGCGCGTACGCAAAATTTCGTGAGCTGAGCGCTGGGTCGGGGAAGCTCCGAGATCGCTACGCGTGCAAATTTTGCGGGAAGGTATTTCCCCGCAGCGCCAACCTGACGCGCCACCTCCGCACCCACACTGGGGAGCAGCCTTACAAATGTAAATACTGCGAGCGCTCGTTCTCCATCTCGTCCAACCTGCAGCGGCACGTCAGGAATATCCACAACAAGGAGAGGCCGTTTCGGTGTCCGCAGTGCGACAGGTGTTTCGGTCAGCAGACGAACCTCGACCGACACCTGAAGAAGCACGAGTCCGAGGGCGGAGACTCACCGAGCTCCGCGGACACGGAACGCGAGGACGCCTACTTTGACGACATCAGGTCGTTCATGGGTAAGGTGACGTGTTCTCCTGGTGGCCGGTCTCCTCCAGCGTCgtcgccgcacgcgccgcacgcgccgcaccgGCCCTCCGTGCTCGCCATCTCCACATAG
Protein Sequence: MGQYKGEPIHLEIDANARPIFMPVRTVPFALKDKVKDEIARLIENKRIAPVEYADWGTPVVPVLKPDGSVRRLKWCQNHQDQIIMDKLASHQSNYDFSSFWKHTNRLNTSHNLPVSVEGVAEGQDIANLFKDHFAVKSPLGRARSDGIEPPHGAVPSLIKAADIRDALRGMKKGKSPGHDGLSIEHLRHAGEHLPRVLALLYNLCLSHSYLPPSLMRTLVVPIVKNKTGDVSDKSNYRPISLATIVAKVLDSVLNTRLDEYVQLHDAQFGFRPGLSTESAIVVLKHAVKYYTERKTSVFGCFLDLSKAFDLVSYDILWAKLKSTGLPVDLLLIFQHWYGNQINVVKWANALSSPYVLECGVRQGGLTSPKLFNLYMNALIEELSGAHAGCFIDGISHNNISYADDMALLAPSVGALNELISICEKYAIAHGLVYNAKKTVYMVFRAPGMEAPDVSLPVLLNGAPVSRVSQFKYLGHYLSDNFKDDVDVERERRALAVRANMLARRFARCTAAVKITLFRAYCTSLYSGALWVNCSQRSLSSLRVQYNNAFRALLGLPRFCSASAMFAEARVDSFSAVLRKKMASLLIRIRGSSNSLLKTIALRAGDSQESGSPPQSPTDSATSESPPTLVHIKQETMPPGVDVKDYYSTLDYRLSDAYLSPNFSEYGRGYLPGNLELPRYDPKNPKEIDKCGKDKDVENELNLPIELSIKNGGVFARVNIPSGTKYGPFVGKWETQPLDTRYAWEVLGKNGIRGWLDGTTEKSNWLKLVQSTNYPQDVNTQHLLLAGQVWYKVTRDIVSGQELLLGPRTPLPLQDVQAAASRQAPSVNPSGVSLSINDDEEREDTEPRCSFCDAPFPNIDATKAPSVNPSGVSLSITDDEEREDTDPRCSFCDAPFPNIDAVNPSGVSLSIIDDEEREDTEPRYSFCDAPFPNIDAVNPSGVSLSIIDDEEREDTEPRYSFCDAPFPNIDATKAPSVNPSGVSLSITDDEEREDTDPRCSFCDAPFPNIDAVNPSGVSLSIIDDEEREDTEPRYSFCDAPFPNIDATKAPSVNPSGVSLSIIDDEEREDTDPRCSFCDAPFPNIDALDRHLIQAHAQPAAAFHCELCNRAYSSRALLLRHRALAHTDIRKYPCENCPKVFTDPSNLQRHIRAQHVGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCKVCFKSYTQFSNLCRHKRMHVACRALVECGKCGNSFNSYASLTKHKRFCDTASANVSLRGQMPQGLSQMPSLPNIGMNNHGNPNPFPMYRGPTLPLPYNTFAQYPGLFSAAAAACPPEFLNPLLFNVQGARLAMEHDFALTNASILSKHQEGRMSVKSVDSSNSLDDMMKKSKDLDYESLKRDSDTGDRTTPNKTHELTVKQSPPSVEDVSSQPRPSPVMSMSTPINLFRDFARDDMKHQKSPFNFSLKLSNNTIQGNKSHSPFPTDLSKNDANDDDKNSDYSDTEVEIKKDYGDQPLDLSVSRKQSDKDSEADVDDRSFRNSSVKSYSPPESPMERDSKTPENETADIDVEGVEPKREDSPPQLVSPQLAFPMPVHPQHNSSLIEAMYRPRFPSFHSASDSILNSSPYVPTPFNFLSPLLGTDGPDRQPSAYAKFRELSAGSGKLRDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFRCPQCDRCFGQQTNLDRHLKKHESEGGDSPSSADTEREDAYFDDIRSFMGKVTCSPGGRSPPASSPHAPHAPHRPSVLAIST*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -