Basic Information

Insect: Apotomis turbidana
Gene Symbol: znf711
Assembly: GCA_905147355.1
Location: LR990305.1:10128147-10153916[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00028 0.031 16.3 0.9 1 23 257 279 257 279 0.98

2 20 5 5.7e+02 2.9 2.8 2 23 284 305 284 306 0.93

3 20 3.5 4e+02 3.4 0.8 2 23 310 332 309 332 0.91

4 20 0.028 3.1 10.1 2.0 1 23 335 357 335 357 0.96

5 20 0.0024 0.27 13.4 5.3 1 23 360 383 360 383 0.97

6 20 1.3 1.4e+02 4.8 0.3 2 20 392 410 391 412 0.87

7 20 0.00017 0.019 17.0 1.4 1 23 433 456 433 456 0.97

8 20 0.042 4.7 9.5 3.4 1 23 462 485 462 485 0.97

9 20 4.2e-06 0.00048 22.1 0.3 2 23 495 516 494 516 0.97

10 20 0.00086 0.097 14.8 1.2 1 23 522 545 522 545 0.96

11 20 0.001 0.12 14.5 3.1 1 23 840 862 840 862 0.98

12 20 1.7 1.9e+02 4.4 0.0 3 23 871 891 869 891 0.87

13 20 0.72 82 5.6 1.3 2 23 926 947 925 947 0.92

14 20 0.11 12 8.2 0.1 1 23 950 971 950 971 0.93

15 20 1.5e-05 0.0017 20.3 1.1 1 23 979 1001 979 1001 0.97

16 20 0.013 1.4 11.1 1.7 3 21 1011 1029 1010 1034 0.93

17 20 2.7e-05 0.0031 19.5 1.0 1 23 1042 1065 1042 1065 0.98

18 20 0.028 3.1 10.0 3.6 1 23 1071 1094 1071 1094 0.97

19 20 1.9e-06 0.00022 23.1 1.8 2 23 1104 1125 1103 1125 0.97

20 20 0.02 2.3 10.5 0.5 1 23 1131 1154 1131 1154 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00028	0.031	16.3	0.9	1	23	257	279	257	279	0.98
2	20	5	5.7e+02	2.9	2.8	2	23	284	305	284	306	0.93
3	20	3.5	4e+02	3.4	0.8	2	23	310	332	309	332	0.91
4	20	0.028	3.1	10.1	2.0	1	23	335	357	335	357	0.96
5	20	0.0024	0.27	13.4	5.3	1	23	360	383	360	383	0.97
6	20	1.3	1.4e+02	4.8	0.3	2	20	392	410	391	412	0.87
7	20	0.00017	0.019	17.0	1.4	1	23	433	456	433	456	0.97
8	20	0.042	4.7	9.5	3.4	1	23	462	485	462	485	0.97
9	20	4.2e-06	0.00048	22.1	0.3	2	23	495	516	494	516	0.97
10	20	0.00086	0.097	14.8	1.2	1	23	522	545	522	545	0.96
11	20	0.001	0.12	14.5	3.1	1	23	840	862	840	862	0.98
12	20	1.7	1.9e+02	4.4	0.0	3	23	871	891	869	891	0.87
13	20	0.72	82	5.6	1.3	2	23	926	947	925	947	0.92
14	20	0.11	12	8.2	0.1	1	23	950	971	950	971	0.93
15	20	1.5e-05	0.0017	20.3	1.1	1	23	979	1001	979	1001	0.97
16	20	0.013	1.4	11.1	1.7	3	21	1011	1029	1010	1034	0.93
17	20	2.7e-05	0.0031	19.5	1.0	1	23	1042	1065	1042	1065	0.98
18	20	0.028	3.1	10.0	3.6	1	23	1071	1094	1071	1094	0.97
19	20	1.9e-06	0.00022	23.1	1.8	2	23	1104	1125	1103	1125	0.97
20	20	0.02	2.3	10.5	0.5	1	23	1131	1154	1131	1154	0.96

Sequence Information

Coding Sequence: ATggaaatttgtataaaaaatgaaTTCTTCACGGACTACAGAGCCATATCTATCTGTCATGCGTGTCTCAGCACAGACAGGGAACTATCAAGCGCAACCGAATATctcgatatttattacaaaatttgCGAAAATCAGAACATGCAACTTCCAATTGAGACATACCTATGTTGGGAGTGTACAGCTTTATTGAAAAGGCTGCGGATGTTCACAAGGAAAGTAGCAGAAGCTCAGAGGATTCTTCAGTGCTTTAACACAAATAAACAGGACTTCCCACGCTCATTATCAAACCTTAGCACAAATAACACCGCCGATACTAAtgagataaaaataatttatgaagAAAAAGAAATTAAACTGATCAAACTGGAATACAAACAATTTGATGATGATTTTGATGTCTCTGACGACATTAATGTCCCATGcgaaaaaacaaaagaacataATACTGATATTAAAGAAGCTAAAGTTGATACGGAAACTCCAGAAGCATCCAAATCTAATCAGAAGGAATATATGAAACAAACTAAACAGTTAATCAATAGAAAAGCCAAGTATAGATTTCTGAACATTAAGTTAAAGAAACAGAGACGTTTGTTAATAAGGAAGATACCAATTAAGCTTAATGAGGTATTGATTGGTTTGGAAGAGGAGAGAGGTTTCCTTGCAAAGGAGAGTTATAAATGTGTGAGTTGTGTTGCAGTGTGGAATGATGAAGATGGTCTTGGGAAGcatattaaaaagtggcatgATGAAgcTAACGGCTCCTACCAGTGTAACATCTGCCAAATCCGCTGCCCGTCTCAAGATGAACTGCTAGCACACCAGACAAAGCATTTCTTCATGAGGGAATGCACGGTGTGCCGGATCCAGTTCTGCTCTGAGAGCATCATGGAGAGGCATCTGGAACAGCACCATCGTATGGTGCAGTGTCTTGCGTGTGAAATGTGCTTCAAGAACGTACCGCTGTTTTACACACACTACAAAGCTTTGCACAAAATTTTCAAATGCGACGTGTGCGGGAAGCGGTGCAATTCGCGAGCCATCATAGAAAGACACCTCAAATACCACTTCGGATACGAATGTCCACACTGCAAGAAGAAACTAAAGAACCCCTGCTCCTACAAGCGCCACGTCGAAACCCAGCACGTATCTTCCATCTCAGAAAACTCGTACTGCGTGCTGTGCGACAAAACATTCATGAACGATCTCCTGTATAAGCAGCATTTGTATAATAGCGCGGCGCATGCGCGAGAAAGCGGCAAGACTAGACCTAAACGCAGTAACGACAAGAAGTACCCCTGCCCCGAGTGCGGTAACGTGTACTCCCGGAAGACATACATGAACAACCACTACCGCCACGTGCACGCCAAGCAGAGCAAGTACTATTGTGAGGATTGCGATCAGCGCTTCTTAAACCGCACGAAATTCCGGGACCACAGGCGGTACCAGCACGAGGGGGCAGAGAGGGCGAAGAACCAGGAATGCACTATCTGTGGGAGAGCGTTTGCGTTCAAGACAACGTTGATCAACCACATCCGAACGCACACGGGGGAGCGGCCGTTCGCGTGCGAACACTGCGACGCCAAGTTCACGCAGAAATACGCCATGTTGACACATGTCAAGTCCATACACTTGAAGACCAAGaAAGCATTTGATACACTGGACCACGAACAACTCCTGCAGGCGATGGACGAGTGTGGTGTTCGTGGTCCAGTGTTGGAGTGGTTCCGTACATATTTGACGGGAAGAACCCTGCGCGTCACTGTGGACGGAGTCAGCGGCGACGAGGCAGCGCTTTCGGAAAAGGACCAGATATGCTGGGAGTGCAACCATTTCATTTTAAAGATGGCTGCCTTCAGATACAAAGCAATGAGGGCACAGGCTCGTCTCTCTGCCTTGGTAAATAGAcaaCCAATTCAATTGCAAAGTTTCTCCAAACTCAAAAAATCTTCTGGTATCTATTTAGATATTACCCCAACTCTGGAAGATCCAATAAAAACAGAGCCTGAACATGACCTCGAGTCCCATGAAGTAGCCAATGTCTTTGAACATTTTGACATCTTTCAGCATGAAACTAGATCCTCTGATGAAAGATATAGTAAAGTTATCGATGTTAAAGATGAAAGTATAGGTGATGAAAATtgtgataaaattgaaattgaagtagcaaatgatgataaagaTGAACATGTAGATGTTAATGAAAGCTGTAAAGTTGATGGTAAAGGCGATAGCATAGCCAATGCGACTCTGTTGACTCTGTTGAATAGAAAAAGCTCTCGATTTTCTTTCCCGGAGATTAATATCCCTACATTTCAAATCCCACCGCAACACATACAAAGCAGTACTAAAACTgtaaaaacatttgaaaaagCACCAGAAAACGATTCACAAACCTCTGAAGAACCTAGGAACTCAGATGCTTTCACAGAAGAAAGACTGACAGAAGAAGAGATGTTACGATGGTGGGAGAAGAAGAGAGAAGAAGAGTTCTATGTGAAGAGTATTCCTGTGTTCCGATGTGAGAAATGTGTGGAGCCTTTTTGTACGAGGAGGTCGTTTTTGGCGCATATGAACAGACATACAGCGGAGCTTGGTGAGTTAGCTTGCAGCGTTTGCGACCTGCGGTTCATAACGGAGGCGGCTCGGGCGGTCCATAAGGCAGGCCATTATAGAATCCTGAAGTGCGTGCACTGTCCCCACAAATGGGACAACGCTAACTCGATGCGGCTCCACTGCAGCAGGGAGCACGGCGTCCCCGTGACGACGTGGACGTGCGACCTGTGTCCGCGCGAGTTCCCATCGCTATACAAGCTATTATGTCACTCGCGGAATCACCGCCTGTTTGAGTGTGAAGAGTGCGGCAAGAGAGTTAGTCCGGGGAGCATCAAATTGCATAAACTTTCACACGAACGCGGCCCAGAAAAACCATTCGCTTGTAAAGAATGCGGTCGGAAATTTCGACTCGAGCGGTTATTGAAGAAACATATGCAGATCCACGGCACTGAAATAGACGAAAAAGCGTACTGCGCCGAATGCAATAAACAGTTCAGAGATATGCACCAGTACAAGAACCACTTGAAGTATGCTGTCAAACACGCCTCAGCTGATGTCTTCAGGTATACGTGCGATGATTGCGGGCGCGGGTTCGCGCACAAAGTGGTTCTGCGGAAGCACTTGGAGACCAAGCATAGTGCGCGGAGGAACTATAAATGCGAGACCTGTTCGGCGACATTCAAAACGACGCAATCCCGGAACAAACATCGCCGGGAGAAACACGAAGGATTCGTGCCGCCGCGGGACAAGATGTGCGACCACTGCGGGAAGGCTTTCCGGACAAAGCCCACACTAGCCCAGCACATGAACACGCACACGGGCAGTCGTCCGTACGCGTGTACTCTGTGCGGCGCAGACTTCGGGTTCAAGAGCGCTCTCTACCTCCACAAGCGATACAAACACAACGTGCAGAAGAAATCCAACAGTATCAAGCAATAA
Protein Sequence: MEICIKNEFFTDYRAISICHACLSTDRELSSATEYLDIYYKICENQNMQLPIETYLCWECTALLKRLRMFTRKVAEAQRILQCFNTNKQDFPRSLSNLSTNNTADTNEIKIIYEEKEIKLIKLEYKQFDDDFDVSDDINVPCEKTKEHNTDIKEAKVDTETPEASKSNQKEYMKQTKQLINRKAKYRFLNIKLKKQRRLLIRKIPIKLNEVLIGLEEERGFLAKESYKCVSCVAVWNDEDGLGKHIKKWHDEANGSYQCNICQIRCPSQDELLAHQTKHFFMRECTVCRIQFCSESIMERHLEQHHRMVQCLACEMCFKNVPLFYTHYKALHKIFKCDVCGKRCNSRAIIERHLKYHFGYECPHCKKKLKNPCSYKRHVETQHVSSISENSYCVLCDKTFMNDLLYKQHLYNSAAHARESGKTRPKRSNDKKYPCPECGNVYSRKTYMNNHYRHVHAKQSKYYCEDCDQRFLNRTKFRDHRRYQHEGAERAKNQECTICGRAFAFKTTLINHIRTHTGERPFACEHCDAKFTQKYAMLTHVKSIHLKTKKAFDTLDHEQLLQAMDECGVRGPVLEWFRTYLTGRTLRVTVDGVSGDEAALSEKDQICWECNHFILKMAAFRYKAMRAQARLSALVNRQPIQLQSFSKLKKSSGIYLDITPTLEDPIKTEPEHDLESHEVANVFEHFDIFQHETRSSDERYSKVIDVKDESIGDENCDKIEIEVANDDKDEHVDVNESCKVDGKGDSIANATLLTLLNRKSSRFSFPEINIPTFQIPPQHIQSSTKTVKTFEKAPENDSQTSEEPRNSDAFTEERLTEEEMLRWWEKKREEEFYVKSIPVFRCEKCVEPFCTRRSFLAHMNRHTAELGELACSVCDLRFITEAARAVHKAGHYRILKCVHCPHKWDNANSMRLHCSREHGVPVTTWTCDLCPREFPSLYKLLCHSRNHRLFECEECGKRVSPGSIKLHKLSHERGPEKPFACKECGRKFRLERLLKKHMQIHGTEIDEKAYCAECNKQFRDMHQYKNHLKYAVKHASADVFRYTCDDCGRGFAHKVVLRKHLETKHSARRNYKCETCSATFKTTQSRNKHRREKHEGFVPPRDKMCDHCGKAFRTKPTLAQHMNTHTGSRPYACTLCGADFGFKSALYLHKRYKHNVQKKSNSIKQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -