Atur045695.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apotomis turbidana
Gene Symbol
-
Assembly
GCA_905147355.1
Location
LR990302.1:99901-120266[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 3.3 3.8e+02 3.5 2.3 3 20 170 187 169 189 0.90
2 34 0.00016 0.018 17.1 1.2 1 23 194 216 194 216 0.99
3 34 3.5e-05 0.0039 19.2 0.3 2 23 223 244 222 244 0.97
4 34 3.2e-06 0.00036 22.4 0.3 1 23 247 269 247 269 0.97
5 34 0.00038 0.043 15.9 4.6 1 23 275 297 275 297 0.99
6 34 0.14 16 7.8 3.8 1 23 303 326 303 326 0.94
7 34 0.0022 0.25 13.5 1.6 1 23 332 354 332 354 0.97
8 34 5.4e-05 0.0061 18.6 3.3 1 23 360 382 360 382 0.98
9 34 1.2 1.3e+02 4.9 0.0 1 18 388 405 388 405 0.92
10 34 0.00096 0.11 14.6 0.8 1 23 566 588 566 588 0.98
11 34 2.8e-05 0.0032 19.5 0.2 2 23 595 616 594 616 0.97
12 34 6.7e-07 7.5e-05 24.6 0.5 1 23 619 641 619 641 0.97
13 34 0.0061 0.69 12.1 4.8 1 23 647 670 647 670 0.97
14 34 0.23 26 7.2 5.7 1 23 676 698 676 699 0.94
15 34 0.002 0.23 13.6 3.0 1 23 705 727 705 727 0.97
16 34 5.4e-05 0.0061 18.6 3.3 1 23 733 755 733 755 0.98
17 34 8.9e-07 0.0001 24.2 1.3 1 23 761 783 761 783 0.99
18 34 4.1e-06 0.00046 22.1 2.5 1 23 789 811 789 811 0.99
19 34 1.1e-05 0.0012 20.8 2.6 1 23 817 839 817 839 0.98
20 34 0.00066 0.075 15.1 6.2 1 23 845 867 845 867 0.98
21 34 0.00022 0.025 16.6 1.7 1 23 873 895 873 895 0.98
22 34 0.00096 0.11 14.6 0.8 1 23 1084 1106 1084 1106 0.98
23 34 2.8e-05 0.0032 19.5 0.2 2 23 1113 1134 1112 1134 0.97
24 34 6.7e-07 7.5e-05 24.6 0.5 1 23 1137 1159 1137 1159 0.97
25 34 0.00038 0.043 15.9 4.6 1 23 1165 1187 1165 1187 0.99
26 34 0.23 26 7.2 5.7 1 23 1193 1215 1193 1216 0.94
27 34 0.002 0.23 13.6 3.0 1 23 1222 1244 1222 1244 0.97
28 34 5.4e-05 0.0061 18.6 3.3 1 23 1250 1272 1250 1272 0.98
29 34 8.9e-07 0.0001 24.2 1.3 1 23 1278 1300 1278 1300 0.99
30 34 8.2e-06 0.00093 21.2 2.2 1 23 1306 1328 1306 1328 0.99
31 34 3.4e-06 0.00039 22.3 1.1 1 23 1334 1356 1334 1356 0.98
32 34 0.00066 0.075 15.1 6.2 1 23 1362 1384 1362 1384 0.98
33 34 0.00022 0.025 16.6 1.7 1 23 1390 1412 1390 1412 0.98
34 34 0.0024 0.27 13.4 0.8 1 23 1418 1440 1418 1440 0.98

Sequence Information

Coding Sequence
ATGAAATTTATCTATGTTCTCGAACTTGCGATTGTGAACCAAAGACACGAAGGAGTCACGCTCTCGGCGCTCGGTGGTTTACGTTGTCGGGTGCGCTTGTCGCGTCTGTCGTCGTGTCGCTCGTGTGGCGCGCCTGTCGCCTGCGCGGGGAGCGTGGCACACACATGCGCTCGCGACACGCGGCACGCGCGCGACGCGCCGCGGGCCGACGCAACCAGACGCCGCCTCGTAGCCACAGCGCGCCACCAGACAAACGAGCGCAACGAAAGAAGCGCGCGCCCGAGCGACAGACGCGGTAGAAACAGGCCGGAATCTGTCCATAAAAATGAAGATGCCTTGACTCCACATCGAGCGCCAAACATACATACTGCTGGAGAACCTCGTATAAGGAAAAGGAAAGTTGCTACTAGTAAGATTTCCGATAGCGCCAATTTGAGTTTTAGTAACACCTCTTCAATAGTGGGTCCCTCTCGGCGCGGAGTGCCGGCCGGCGCGCAGCCTCGCGCCTGCGCAGCCTGCGGCCGACGATTCCAATACAAGCATCACTTCGACGCGCACACGTGCGCCCCGCCCGGCCCTTACACCTGCGACGTGTGCAAAAAGCTGTTCATGCAAAAACGCACACTGGAAAATCACATCAAAGTACATGCAGAGCGGAAACCTGATTACTGCGAAGTTTGCAACGAAGAGTTTCCCAACAAGTCAGCTTTAGTGAAACATAAGAGAACTCATAAACTTTTCCAATGTGAAGAATGTAAAAAATCATTTACACAAAAAGGGGGTCTAAAAATACATATCGGAATTCACAAAGGCGAGAAGCCCTATTCTTGTGAATTGTGCCACAAAATGTTTGGAACGAGCACACAGTACCTTAGACATAAGAGGACTCATACAGGCGAAAAACCTCACAGTTGTGAATACTGTAGCAAgcgatttattacaaaacaaagCAAAGTGCTGCACGAGCGGAACCGCCACACGGGTGACAAACCCTACTGCTGCGCTGTGTGCCTCAAGGCGTTTGCGAGAAAGAACTCCCTCACCATGCACAGCAGGATACACACAGGATATCGACCATTTTCTTGCGaagattgttataaaaaattTATTACTAGAGCGCATTTAGAACGCCATAAAAAAATTCACACCGGAGAAAAAATTTACAGTTGTGAACAATGTGGAGTCACGCTCTCGACGCTCGGTGGTTTACGTCGTCGGGTGCGCTTGTCGCGTCTGTCGTCGTGTCGCTCGTGTGGCGCGCCTGTCGCCTGCGCGGCGAGCGTGGCACACACATGCGCTCGCGACACGCGGCACGCGCGCGACGCGCCGCGAGCCGACGCCGCCAGACGTCGCCTCGTAGCTACAGCGCGCCACCAGACAAACGAGCGCAACGACAGTGGCGCGCGCCCGAGCGACAGTCGCGGTGGAAACAGCCCGAAATCTGTCCATAAAAGTGAAGATCATCGTGCGCCAAACATACACACTGGTGGAGAACCTCGTATAAGAAAAAGGAAAGTTGCTACTAGTAAGATTTCCGATAGCGCCAATTTGAGTTTTAGTAACACCTCTTCAATAGTGGGTCCCTGTCGGCGCGGAGTGCCGGCCGGCGCGCAGCCTTGCGCCTGCGCAGCCTGCGGCCGACGATTCCAATACAAGCATCACTTCGACGCGCACACGTGCGCCCCGCCCGGCCCTTACGCCTGCGACGTGTGCAAAAAGCTGTTCATGAAAAAACGCACACTGGAAAATCACATCAAAGTACATGCAGAGCGGAAACCTGATTACTGCGAAGTTTGCAACGAAGAGTTTCCCAACAAGTCAGCTTTAGCGAAACATAAGAGAACTCATAAACTTTTCCAATGTGAAGAATGTAACAAATCATTTACACAAAAAGGCGgtctaaaaaaacatatcggAATTCACAAAGGCGAGAAGCCCTATTCTTGTGAATTGTGCCACAAAATGTTTGGAACGAGCACACAGTACCTTAGACATTTTAAGAGAACTCATACAGGCGAAAAACCTCACAGTTGTGAATACTGTAGCAAGCGATTTATAACAAAGCAAAGCAAAGTGCTGCACGAGCGGAACCACCACACGGGCGACAAACCCTACTGCTGCGCTGTGTGCCTCAAGGCGTTTGCGCACAAGAGCTCCCTCACCATGCACAGCAGGATACACACAGGATATCGACCATTTTCTTGCGaagattgttataaaaaattTATTACTAGAGCGCATTTAGAACGCCATAAAAAAATTCACACCGGAGAAAAAATTTACAGTTGTGAACAATGTGGTAAACAGTTCGGACGAAAGTATACCTTAACAGCGCATTTACGAACTCACACGAACAAGCGACCTTACAGTTGTGACGAATGTGGCAAGCGGTTTGTTCAATCATGCGCATTAATAAAGCACAAACGAACTCACACGAACGAACGACCTTACGTTTGTGAAGAATGTAACAAGAGATTTGCTCATAAATACTCATTAACAGTGCACAAACTAACTCACACGGGCGAAAAGCCGCACAGCTGTGAAATGTGTAACAAGCGATTTGCGCTTAAACATCACTTGGCGGCGCACACGCGCACGCACACGGGCGAAAAACCGTACAGCTGTGTAATCTGTGAAACTAATTTCACACTAAAAGCACACTTACAGAACCATCTCCAGACACATGCGACCAACAAATCGTATTCTTGCAAAATTTGTCTGAAACAGTTTGCGGGAGTCACGCTCTCGACGCTCGGTGGTTTACGTTGTCGGGTGCGCTTGTCGCGTCTGTCGTCGTGTCGCTCGTGTGGCGCGCCTGTCGCCTGCGCGGCGAGCGTGGCACACACATGCGCTCGCGACACGCGGCACGCGCGCGACGCGCCGCGAGCCGACGCCGCCAGACGTCGCCTCGTAGCTACAGCGCGCCACCAGACAAACGAGCGCAACGACAGTGGCGCGCGCCCGAGCGACAGTCGCGGTGGAAACAGCCCGAAATCTGTCCATAAAAGTGAAGATCATCGTGCGCCAAACATACACACTGGTGGAGAACCTCGTATAAGAAAAAGGAAAGTTGCTACTAGTAAGATTTCCGATAGCGCCAATTTGAGTTTTAGTAACACCTCTTCAATAGTGGGTCCCTGTCGGCGCGGAGTGCCGGCCGGCGCGCAGCCTTGCGCCTGCGCAGCCTGCGGCCGACGATTCCAATACAAGCATCACTTCGACGCGCACACGTGCGCCCCGCCCGGCCCTTACGCCTGCGACGTGTGCAAAAAGCTGTTCATGAAAAAACGCACACTGGAAAATCACATCAAAGTACATGCAGAGCGGAAACCTGATTACTGCGAAGTTTGCAACGAAGAGTTTCCCAACAAGTCAGCTTTAGCGAAACATAAGAGAACTCATAAACTTTTCCAATGTGAAGAATGTAACAAATCATTTACACAAAAAGGCGgtctaaaaaaacatatcggAATTCACAAAGGCGAGAAGCCCTATTCTTGTGAATTGTGCCACAAAATGTTTGGAACGAGCACACAGTACCTTAGACATAAGAGAACTCATACAGGCGAAAAACCTCACAGTTGTGAATACTGTAGCAAGCGATTTATAACAAAGCAAAGCAAAGTGCTGCACGAGCGGAACCACCACACGGGCGACAAACCCTACTGCTGCGCTGTGTGCCTCAAGGCGTTTGCGCACAAGAGCTCCCTCACCATGCACAGCAGGATACACACAGGATATCGACCATTTTCTTGCGaagattgttataaaaaattTATTACTAGAGCGCATTTAGAACGCCATAAAAAAATTCACACCGGAGAAAAAATTTACAGTTGTGAACAATGTGGTAAACAGTTCGGACGAAAGTATACCTTAACAGCGCATTTACGAACTCACACGAACAAGCGACCTTACAGTTGTGACGAATGTGGCAAGCGATTTGTTCAATCATGCGCATTAATAACGCACAAACGAACTCACACGAACGAACGACCTTACGTTTGTGAAGAATGTAACAAGAGATTTGCTCAAAAATACTCATTAACAGTGCACAAACTAACTCACACGGGCGAAAAGCCGCACAGCTGTGAAATGTGTAACAAGCGATTTGCGCTTAAACATCACTTGGCGGCGCACACGCGCACGCACACGGGCGAAAAACCGTACAGCTGTGTAATCTGTGAAACTAATTTCACACTAAAAGCACACTTACAGAACCATCTCCAGACACATGCGACCAACAAATCGTATTCTTGCAAAATTTGTCTGAAACAGTTTGCGGGTAAATTAGCTCTGAAGAGACATAAACGGGCTCACgaggaaaataaatgtttgaaaagTGGTGCAGATACAACCGCGCGCATGCGCAGCAACGACTCTGTTTAA
Protein Sequence
MKFIYVLELAIVNQRHEGVTLSALGGLRCRVRLSRLSSCRSCGAPVACAGSVAHTCARDTRHARDAPRADATRRRLVATARHQTNERNERSARPSDRRGRNRPESVHKNEDALTPHRAPNIHTAGEPRIRKRKVATSKISDSANLSFSNTSSIVGPSRRGVPAGAQPRACAACGRRFQYKHHFDAHTCAPPGPYTCDVCKKLFMQKRTLENHIKVHAERKPDYCEVCNEEFPNKSALVKHKRTHKLFQCEECKKSFTQKGGLKIHIGIHKGEKPYSCELCHKMFGTSTQYLRHKRTHTGEKPHSCEYCSKRFITKQSKVLHERNRHTGDKPYCCAVCLKAFARKNSLTMHSRIHTGYRPFSCEDCYKKFITRAHLERHKKIHTGEKIYSCEQCGVTLSTLGGLRRRVRLSRLSSCRSCGAPVACAASVAHTCARDTRHARDAPRADAARRRLVATARHQTNERNDSGARPSDSRGGNSPKSVHKSEDHRAPNIHTGGEPRIRKRKVATSKISDSANLSFSNTSSIVGPCRRGVPAGAQPCACAACGRRFQYKHHFDAHTCAPPGPYACDVCKKLFMKKRTLENHIKVHAERKPDYCEVCNEEFPNKSALAKHKRTHKLFQCEECNKSFTQKGGLKKHIGIHKGEKPYSCELCHKMFGTSTQYLRHFKRTHTGEKPHSCEYCSKRFITKQSKVLHERNHHTGDKPYCCAVCLKAFAHKSSLTMHSRIHTGYRPFSCEDCYKKFITRAHLERHKKIHTGEKIYSCEQCGKQFGRKYTLTAHLRTHTNKRPYSCDECGKRFVQSCALIKHKRTHTNERPYVCEECNKRFAHKYSLTVHKLTHTGEKPHSCEMCNKRFALKHHLAAHTRTHTGEKPYSCVICETNFTLKAHLQNHLQTHATNKSYSCKICLKQFAGVTLSTLGGLRCRVRLSRLSSCRSCGAPVACAASVAHTCARDTRHARDAPRADAARRRLVATARHQTNERNDSGARPSDSRGGNSPKSVHKSEDHRAPNIHTGGEPRIRKRKVATSKISDSANLSFSNTSSIVGPCRRGVPAGAQPCACAACGRRFQYKHHFDAHTCAPPGPYACDVCKKLFMKKRTLENHIKVHAERKPDYCEVCNEEFPNKSALAKHKRTHKLFQCEECNKSFTQKGGLKKHIGIHKGEKPYSCELCHKMFGTSTQYLRHKRTHTGEKPHSCEYCSKRFITKQSKVLHERNHHTGDKPYCCAVCLKAFAHKSSLTMHSRIHTGYRPFSCEDCYKKFITRAHLERHKKIHTGEKIYSCEQCGKQFGRKYTLTAHLRTHTNKRPYSCDECGKRFVQSCALITHKRTHTNERPYVCEECNKRFAQKYSLTVHKLTHTGEKPHSCEMCNKRFALKHHLAAHTRTHTGEKPYSCVICETNFTLKAHLQNHLQTHATNKSYSCKICLKQFAGKLALKRHKRAHEENKCLKSGADTTARMRSNDSV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-