Atur006564.1
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- SMARCC2
- Assembly
- GCA_905147355.1
- Location
- LR990281.1:32511959-32531670[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 6.9e-14 2.1e-10 42.2 0.1 3 44 518 559 516 561 0.95 2 16 4.1e-09 1.3e-05 26.9 0.0 11 44 581 614 580 616 0.94 3 16 4.1e-09 1.3e-05 26.9 0.0 11 44 636 669 635 671 0.94 4 16 4.1e-09 1.3e-05 26.9 0.0 11 44 691 724 690 726 0.94 5 16 4.1e-09 1.3e-05 26.9 0.0 11 44 746 779 745 781 0.94 6 16 4.1e-09 1.3e-05 26.9 0.0 11 44 801 834 800 836 0.94 7 16 4.1e-09 1.3e-05 26.9 0.0 11 44 856 889 855 891 0.94 8 16 4.1e-09 1.3e-05 26.9 0.0 11 44 911 944 910 946 0.94 9 16 4.1e-09 1.3e-05 26.9 0.0 11 44 966 999 965 1001 0.94 10 16 4.1e-09 1.3e-05 26.9 0.0 11 44 1021 1054 1020 1056 0.94 11 16 4.1e-09 1.3e-05 26.9 0.0 11 44 1087 1120 1086 1122 0.94 12 16 4.1e-09 1.3e-05 26.9 0.0 11 44 1142 1175 1141 1177 0.94 13 16 4.1e-09 1.3e-05 26.9 0.0 11 44 1197 1230 1196 1232 0.94 14 16 4.1e-09 1.3e-05 26.9 0.0 11 44 1252 1285 1251 1287 0.94 15 16 4.1e-09 1.3e-05 26.9 0.0 11 44 1307 1340 1306 1342 0.94 16 16 4.1e-09 1.3e-05 26.9 0.0 11 44 1362 1395 1361 1397 0.94
Sequence Information
- Coding Sequence
- ATGAAAGTGTTCATGGACATGAAGCCCGGTGGGACGCTGTGCACGGTGCTCGCCACCATGTTCCGTTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCGCGCAAGGACCTGAACGTGCAGATGATGATGGAGATCGAGTCTTCGCTGCTGGGCGCCGAGGTGATCCGCTCGCCGTCTGTCTTTATCCGGCCGGACGTCGACAAGGCCACGGCGAACAAAGTCAAGGATATCGTAGTCAATCGTCAGGGGGAAATTTGTGAGGACGAAGAGGACGCGACGCACATAATTTACCCGACCGTCGACCCGGTGGAGGAGGAGTACGCGCGGCCCGTGTTCCGGCGCGGGCCGCACGTGCTCGTGCACTGGTACTACCTGCCCGACAGCCACGACACCTGGACGCAGGCCGACCTGCCGGTGGAGATACCGGAGACCGCGAACTGGGATTGCACGCGGAGCGAGCCGTGGCGCGTGACGGCAGCGTGGGTGCTGGACCTGGCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGGTGGACGCCGGCGGCAAGAAGAAGGTTCACAAGCTGCGGCTGTCGGTGGACGAGCTGATGCCGGGCGGCGAGACGTCCAGCAAGGGCAAGAAGGGCAAGCGCAAGCGCTCGCCCTCGCCGCCGCCGCAGAAGCACAACAAGAGGAAGAGCCGCGTGACCAAGAAACGCGACAACGACGGCGAAGACGAGGAGGACAACGCGTCGCGCGACAACACCGACGTCGCGCCCACACCTGAAAGCGCCCCCGTCGAGAAAGAACCACCGGCAGAGACGGCCGCGCCGCCGGCGGAGCCGATCGAGCCGAAGACCGAAGCGCCCGCCACCCCGGCGCCCGTGCTCGACACGCACGAGGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGAGACCGTGGTGAAGGAGGAGCCGGAGGACAACGTGACCGACCAGACGCATCACATCGTGGTGCCGTCGTACTCGGCGTGGTTCGACTACAACTCCATCCACACCATCGAGAAGCGCGCGCTGCCCGAGTTCTTCAACGGCAAGAACAAGTCCAAGACGCCGGAGATCTACCTCGCGTACAGAAACTTCATGATCGACACGTACCGGCTGAACCCGACGGAGTACCTGACGAGCACGGCGTCGCGCCGCAACCTCGCCGGCGACGTCTGCGCCATCATGCGCGTACACGGCTTCCTCGAGCAGTGGGGACTCATCAACTACCAGTTGGAGGCGGAGTCGCGTCCGACGGCGATGGGCCCGCCGCCCACGTCGCACTTCCACGTGCTGTCCGACACGCCGTCGGGCCTGCAGCCGCTCGCGCGCTCCGCGCTGCCGCGCCCAGTGGAGAACGCGGCAGTGCCTAAGATAGAGGCGGGGCTGCCGAACGGCGCGGACGCGGGCGCGCCTGCCGCCGCCGGCGCGCCCGTCAAGGCGGAGAACCTGCTCGAGATGGGCGGCGCGCCCGGCCTCAAGCTCGACCAGTaccgcggcggcgggcgcgggcgcgagTGGACGGAGCAGGAGACGCTGCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTCAGTTGGCCTGGTACCCGCTCCTGCTGCTGGAGGGGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCACGACGAGTGCATCCTGCACTTCCTCAGGCTGCCCATCGAGGAGCCCTACCTGCAGGACGCCGCCTCAGGTGGCGTACTGGGCCCACTAGCCTACCAGCCGATCCCGTTCAGCAAGCAGGGCAACCCCGTCATGAGCACCGTGGCCTTCCTCGCCTCGGTGGTCGACCCGCGCATCGCTTCCAAGGCTACTTGCGCCGCCATGGCTGAGTTTTCCGCGATCAAGGACGAGGTGCCTGCGGCGATGATGGAGGCACACGTGAAGGCTGCCGAGGCGCACGGGCCCGCCGCCGCACTCGCCGCCACCGGCATCGCCGGCACCGCGCCCGACCTGCCGCCCGCTACAGAAAAGAAAGAAGGTACCGCCGAGGTAAAGACGGAAGCTATGGAAGTGGAAGAAGGCGAGGTGAAGCCGAAAGAAGAGCCCGCCGACCCGGCCGCGCCCGAGGAGCCTAAAGACACTAAAGAAACGCCGCCGCCACAGCCAGAAGGCCCATCGACAGTGGACGCGAAGCTGCAGTCGGCGGCCGCGGCCGCtctggccgccgccgccgtcaaGGCCAAGCACCTCGCGGGCGTAGAGGAGCGCAAGATCAAGTCGCTGGTCGCGCTGCTCGTGGAGACGCAGATGAAGAAGCTCGAGATCAAGCTGCGGCACTTCGAGGAGCTCGAGGCCACCATGGAGCGAGAGAGAGAAGGGCTGGAGTATCAGCGGCAGCAGTTGATCCAGGAGCGGCAGCAGTTCCACCTGGAGCAGCTCAAGGCTGCCGAGTTCCGCGCGCGCCACCAGGCGCACCAGAGGATGCAGCAGGAGGGCGCGCCGGCGGCGCCGGGCCCGGCGGCCGAGGCGCCGCCCGCCGACGCGGCGCCGCACGCGCAGCACGCATAG
- Protein Sequence
- MKVFMDMKPGGTLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEVIRSPSVFIRPDVDKATANKVKDIVVNRQGEICEDEEDATHIIYPTVDPVEEEYARPVFRRGPHVLVHWYYLPDSHDTWTQADLPVEIPETANWDCTRSEPWRVTAAWVLDLAQYNEWMNEEDYEVDAGGKKKVHKLRLSVDELMPGGETSSKGKKGKRKRSPSPPPQKHNKRKSRVTKKRDNDGEDEEDNASRDNTDVAPTPESAPVEKEPPAETAAPPAEPIEPKTEAPATPAPVLDTHEDSQGKHSDSNTQETVVKEEPEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLARSALPRPVENAAVPKIEAGLPNGADAGAPAAAGAPVKAENLLEMGGAPGLKLDQYRGGGRGREWTEQETLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGCPSRSPTCRTPPQAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGQLAWYPLLLLEGLELHRDDWNRVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGGVLGPLAYQPIPFSKQGNPVMSTVAFLASVVDPRIASKATCAAMAEFSAIKDEVPAAMMEAHVKAAEAHGPAAALAATGIAGTAPDLPPATEKKEGTAEVKTEAMEVEEGEVKPKEEPADPAAPEEPKDTKETPPPQPEGPSTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRMQQEGAPAAPGPAAEAPPADAAPHAQHA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -