Basic Information

Insect: Apotomis turbidana
Gene Symbol: -
Assembly: GCA_905147355.1
Location: LR990303.1:16036897-16039599[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.7e-08 0.00011 23.5 0.0 2 40 17 55 16 59 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.7e-08	0.00011	23.5	0.0	2	40	17	55	16	59	0.89

Sequence Information

Coding Sequence: ATGGTGAGAAACTACATCCGAAAAACCGACAGAGGTTTCAGATACTCGAGGGCCCGCCTCCTCGAGGCTGTCGGGAGGATCAGGTCCAAGGAGCTGAACATCTGTTCGGCGTCCGCCCGCTACAACATCCCGAAGACAACCCTGCACGACCACGTCGTCGGGAAGCGGAGTAAGTCCTGCACCCTCGGCAAGCCTCCGGCCTTGCCCCACGACGTTGAGAAAACCCTCGCTGCAAACCTCCTAGAAATCGATAGGAACGGATTCCAATTTAGCAGGAGGGAGAAATCGGAACTAGTGGGACTGTACTTGCGATCGAACAATGTGAAGAATCCATTCAAAAGAGACGTACCAGGCGAATGCTGGTGGTCCTCTTTCGGGAAAAGACACAGACTTACAACCAAGTCGCTGCTTGTCGAATTCGGCAGACCGAAAGAAAGAGATGTTATTGTTGTTAAGGAATACTATTCTACAATAGAATCGAAGATTAACGAGTTGGATTTAGCAGATAAGCCTGGACAGATTTGGCATATCGAAGAGCATTGCTTTTGTGATGGCAAGAGAGTGGCTAGGGATGATAAGAAGAAAGATATTACAGTTGTTACGGCTTTGAGTGCTGAAGGGAAAAAGGCGCCGCTTCTGACAGTTTCAAAAGGTGAAGAACGTAAGCAGTGGCTACTGGGGAAGCAGATAGTTGTCAGTCACCCTCGTGGCATGTGCAGAGACGTGTTCAAGGACTATTTCACAGCGATATTCCTCAATTACATCGACGATTCACGACCATGTATTGTCATTTACGACGGACAGAGCTCCCATATCGATCTAGATCTCATTAACGACGCTAGAAAAGCCAAAATCTCGTTGATCAAAAGCCCATCTTATTTGGAAGGCTTGGGCATCTCTGTTACGAATGTCTTGAAACGAAAATGGGACACAGAGACGTTAACATCGCCAATAGAATTCAAGAGTGTTATCGCTGACACGTTTGATAAACTTGAAGTTTTAGAAATTGAAGAAGGATTTAGAAGCGCGGGAGTGCATCCTTTTGAGGCTGTCTGTGATAGTAAATTTGATAGTCGTTTGGACGTATACGAGGAATTTCTggagtttaaaattaataattcacTCAGGGATGAGCCAGAACAAGTAATCATGCAGGAAGATATTGGGTTTCAGATGGCTCTGAAGATAGAACCGGAGGATTCTTCAACAAGCTTTGAAGTCGTTATGGAATCAATGCTTGAGCCTGAGCAAACGAAAGCGCAAGAGTACAGTCAGGAGCTAAAACAAGCCATGATTGCTGTTAAAAAAGGTCTGACTTATATGGAAATTTCTCCCCTCCCTGATTTATGCGAGAGACCGCATCGAGAGTATTCAGGTGAGCGAAGATTAAGCCTCGAACAGGAAAACCAGCTAATCATATGGGTCGCAGATCTCAATGACGCGGGCTTTATGGTTACAGAGAAGTATTTAGCTGATGCTGTGAACAATTTGATAACAAACTTCGGGAGAGTTCCACTCAAACGTAAAGTTAGGCATTTGTATAAAGGGTTCTTGAAGAGGCATCCTGAAATAGCTAATATAGTAACGCAGGAAACAGAAAATTCCGAAGACGCTTTGAACAGCAGGTTTGATCACGTGCAGAACTATATCAAGGACAGAGATTTGAAAGACATTCTAAATGATCCAAAACGAATATTCAACTGTGCAGACACTGCATTCAATTTAACTCCTGTAGAAAACCAAGAGGTTGATAAAGAAATCCAAGTTAATGCGAATGATTTGACAGTTGTAGTAACGGCTTCTGCAGATGGACAAATTCAGGCGCCTTGTGTGTTCTTCAATTTCAAAGCTGCAGGTCTCAACTTAACGTGGACGAAGGGAGACTTGCTCTGTGACCAGATCATCGATGTCTTCCAACCCTGGCTGATTGAAAACGAGATACCACTTCCTGTAATACTGTTTCTAGATTATACTGCGCATGTAAATCTGAATTTGCTTGATTTCTGCCAAGAGAACCAAATCATTTTAGTCGCATTGCCTGATAGTCGTCTACAGCCATTAGATACAGTTTTCCGGCCATTAAAAGAATATTGGGGGAAAGAACAAAGTGTAATACAGAAATTGAAGAAGGATGATCTCGGGAGGGAGTTGGAAAATCGCATAAACAAACATTTGAATAGTGAAATAACTGATGGTTTTAAAATGTGCGGGTTGTACCCTTTCGATCTGAAGATtggttataataattatattatatgccaaggaacacaaaattaa
Protein Sequence: MVRNYIRKTDRGFRYSRARLLEAVGRIRSKELNICSASARYNIPKTTLHDHVVGKRSKSCTLGKPPALPHDVEKTLAANLLEIDRNGFQFSRREKSELVGLYLRSNNVKNPFKRDVPGECWWSSFGKRHRLTTKSLLVEFGRPKERDVIVVKEYYSTIESKINELDLADKPGQIWHIEEHCFCDGKRVARDDKKKDITVVTALSAEGKKAPLLTVSKGEERKQWLLGKQIVVSHPRGMCRDVFKDYFTAIFLNYIDDSRPCIVIYDGQSSHIDLDLINDARKAKISLIKSPSYLEGLGISVTNVLKRKWDTETLTSPIEFKSVIADTFDKLEVLEIEEGFRSAGVHPFEAVCDSKFDSRLDVYEEFLEFKINNSLRDEPEQVIMQEDIGFQMALKIEPEDSSTSFEVVMESMLEPEQTKAQEYSQELKQAMIAVKKGLTYMEISPLPDLCERPHREYSGERRLSLEQENQLIIWVADLNDAGFMVTEKYLADAVNNLITNFGRVPLKRKVRHLYKGFLKRHPEIANIVTQETENSEDALNSRFDHVQNYIKDRDLKDILNDPKRIFNCADTAFNLTPVENQEVDKEIQVNANDLTVVVTASADGQIQAPCVFFNFKAAGLNLTWTKGDLLCDQIIDVFQPWLIENEIPLPVILFLDYTAHVNLNLLDFCQENQIILVALPDSRLQPLDTVFRPLKEYWGKEQSVIQKLKKDDLGRELENRINKHLNSEITDGFKMCGLYPFDLKIGYNNYIICQGTQN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -