Atur010006.1
Basic Information
- Insect
- Apotomis turbidana
- Gene Symbol
- -
- Assembly
- GCA_905147355.1
- Location
- LR990282.1:36248438-36250480[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-10 5.7e-07 30.8 0.0 3 37 17 51 15 57 0.93
Sequence Information
- Coding Sequence
- ATGGTGCGTACATATAAGAAAAAAACCCACCAGGGAGAATGGTCGGCAGAAAATATGACTACAGCTGCTAATAAGGTGCTGACTAAAGAGCTAACTTTACGTCGAGCTGCCGAGTTGTACAATGTTCCGTTCACGAGCTTGCAAAGAAGGGTCACATTGTCTCGAGGCGTATTAAAAAATCGTGGTGGACAACCAACATTGAACGAGGAAGCCGAGAAGTTATTTGCTGATCGACTATTGCAATTAGCAACTCGAGGATTTGGACTTACACCGAAATCAGTACGTAAGTACGTTTTTCAGTACGCTGAACGGAAGCAAATAGCACATAAATTTAATAGACAATCAGAAATGGCAGGCGAAGATTGGTTCCATCGATTCATGACTAGAAATCCGAATTTAGCTATTCGAAAACCTGAGGGACTTTCGCGAGCAAGAATGAACGGTATGACAAAAGAAAAAGTGTCAGAATACTTTACTACATTAAGTAAGGTTATAGATGACAACAAGCTTAGAGGAAAGCCCGAATGTATTTATAATGTGGATGAGACGGGTATTCCTCTTAATAATCGCCCGCCAAATGTTGTCACCCAAAAAGGGTCAAGAGACGTTGTCAGTATTACCAGCGTAGAACGAGGTGAAAATGTAACTGTTTTGGCGTGTATGAATGCTGCAGGGCAGTTTATACCCCCATTTGTGCTCTTTAAAGGCGTTCGTAAACGAGACGACTTTATGATTGGGATGCCTCCTGGTACACAAGTTGCTATGACAGAGAAGGGTTGGGTAAATGAAGACGCATTTAAGTTGTGGATAAACCATTTCAATCGATACCGGACACAAGGAAAAGTCATTTTAATATTGGATGGCCACGCATCTCATACCAGCTTATCTGTGGTTGATTTATGTGAATCATCAGACATAGAACTAGTTTTGATGCCCCCTCACACATCACACGCTCTGCAACCACTAGATGTGTCTTTTTTCAAACCTTTAAAGACATACTATAACCAACACGCTACGGCATGGCAACATTCACATCCGGAAAAAGGAATTACCAAAGTTGCTTTTGGTGGAATATTTAAACAGGCGTGGAACCAGGCGGCGACAGTTGGAAATGCCACAAAAGGCTTTGAAAAGGCCGGAATATATCCATTAAATCCCAATGCTGTACCGGACACaaagtttgtctctgaattccCAACAACAGATACTCTTCCATCAACAAGTGCACAACCAGCGGCTACACAAGTTGTACAAAACACATCGCCATTGCCAATTGAGCCTGCTACAAACTTGACAGCGCCACTAGTTCCCGATGTTCATCCAACTGCCAGTACAGAGCCAGTTGCAACAACAGTTCTAACAGAGACTTCCACAAACGCGAAAAAGCAGCCTTCTGCAGATGATCCCCAATGTGTTATCCAAATAAATTTGACTGAAACAGAAGGACCACCATCACTATCGCAAGAGGCCAAAGAGGTACAGGGAAAAACAACAGCACAGCAGGTTAAGGATGGCATCTCACCAACTACTTTAAAACGACTGGAAGGTAAAATTATAAAAGAGATTGTACCGTCACCAATGAAGCCCCCAGACCAACCACCTAAAAAAGCTCGAAACGTCCATAAGCCTATGTTACATTTAACATCACCAAAAAGCAAAGAAAACCTACGTCTAAAGGACGCAAAGAAACAAGAAAATTTGCAGAAGAAAAatactcaaataaataaaagggtACAGAAACAAATAACCACTAAAGTTAACACAGAGAAGACAAGTAAAAATAAATCCAATTGCAAAAAGCAGGAGCAAGATAAAGAGAACgtgccaaaaaaaaataaaacgacaCCAAAATTAAGAGCTAAAGGTGCTTCGTCATCTCGAGATTGGTATTGTATTTATTGCTCTGAAAAGTTTATACATCCTCCGGTCGAAGATTGGATACAATGCCAGATCTGCGAAGAATGGTGCCATGAAAAATGTGCTGATCGAGGAGGTGTCAAAGGGCCATTCAAATGTGACGTTTGTAATAGCAATGATAATTGA
- Protein Sequence
- MVRTYKKKTHQGEWSAENMTTAANKVLTKELTLRRAAELYNVPFTSLQRRVTLSRGVLKNRGGQPTLNEEAEKLFADRLLQLATRGFGLTPKSVRKYVFQYAERKQIAHKFNRQSEMAGEDWFHRFMTRNPNLAIRKPEGLSRARMNGMTKEKVSEYFTTLSKVIDDNKLRGKPECIYNVDETGIPLNNRPPNVVTQKGSRDVVSITSVERGENVTVLACMNAAGQFIPPFVLFKGVRKRDDFMIGMPPGTQVAMTEKGWVNEDAFKLWINHFNRYRTQGKVILILDGHASHTSLSVVDLCESSDIELVLMPPHTSHALQPLDVSFFKPLKTYYNQHATAWQHSHPEKGITKVAFGGIFKQAWNQAATVGNATKGFEKAGIYPLNPNAVPDTKFVSEFPTTDTLPSTSAQPAATQVVQNTSPLPIEPATNLTAPLVPDVHPTASTEPVATTVLTETSTNAKKQPSADDPQCVIQINLTETEGPPSLSQEAKEVQGKTTAQQVKDGISPTTLKRLEGKIIKEIVPSPMKPPDQPPKKARNVHKPMLHLTSPKSKENLRLKDAKKQENLQKKNTQINKRVQKQITTKVNTEKTSKNKSNCKKQEQDKENVPKKNKTTPKLRAKGASSSRDWYCIYCSEKFIHPPVEDWIQCQICEEWCHEKCADRGGVKGPFKCDVCNSNDN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01075360;
- 90% Identity
- iTF_00149321; iTF_00149322; iTF_00149323;
- 80% Identity
- -