Atur000500.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apotomis turbidana
Gene Symbol
Jarid2
Assembly
GCA_905147355.1
Location
LR990280.1:4798743-4824812[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-15 7.9e-12 47.1 0.0 9 88 224 300 218 301 0.84

Sequence Information

Coding Sequence
ATGTCACAGGATCCGATTCTGTACTTCGAGAAAATCGCCCCGCAAGCCTCCCTCCACGGCCTCTGCAAGATCGTGCCGCCGGCCAGCTTCAAGCCGCCGTGCAACATCAGCGACACCATCCGGTTCGCGGTCATCTACCAGTACATCTCCAAGATGTACAGTCGCTGGGGCCCCGTGACTAGGGAGCTGGCGGCTATCAAGGCCCATCTAAGGACGCAGAGTGTCGTCTTCGCCAGATCTCCTCTATCGCTGGGGACCCGTGACCAGAGAACTGGCGGCTATCAAGGCCCATCTAAGGACTCAGAGTGTCGTCTTCGCCAGGTCTCCTCTAGTAAGTATCTTTATGTTCGTGTGGTTGACAAGATCGTGCCGTCGGCCAGCTTCAAGCCGCCGGGCAACATCAGCGACACCATCCGGTTCGCGGTCATCTACCAGTACATCTCCAAAATGTACAGTCGCTGGGGACCCGTGACCAGAGAACTGGCGGCTATCAAGGCCCATCTAAGGACTCAGAGTGTCGTCTTCGCCAGcgtggtTGACAAGATCATGCCGCCTCCTAGCTTTAAGCCGCCGAGCAACATTGGCGAGACCATCCGGTTCGCGGTCATCTACCGGTACATCTCCAAGATGTACAGTCGCTGGGGCCCCGTGACTAGGGAGCTGGCGGCTATCAAGGCCCATCTAAGGACGCAGAGTGTCGTCTTCGCTATGTCTCATCTACTTGATGGCAGCGAAGTGAACCTCCCCAAACTCTACCACGTGGTGGAGCGTCACGGCGGCCTCAACAACGTGATGCAACGGAAACGCTGGGGCCGCGTCGCCGACGAGATGAAACTCACAAAGCTACAGCATCCTGAACGGAAACTGGACCCGATCTACATGCGCTACCTACTGCCCTACGCCACGCTTTCCGATAAGGAGCGGCAAGCCATAATGTCCGAAGTAGAGAAATACTGGACCCTCAAATACCAGAAGATGCTCAAGAGAGCCCGTAACCCGTTCCAGCGTCAAGCCCGAATGTTGTCGGCTGAGACGGAGAACGAATCCTCTGACGACGAGAGAGACGACACGAGCACAGCGGGCGCTCTACGCGAGGCGGAGGACTGCATAGTACCCGGCCGGGCCATGAATCTGGCCACCTTCAAGAagGTCGCGACAGCATTGATGGACGCGCAGTTCGAACCGAAGAATCAGCCGCCCAACCCCATCGAAGTGGAGAAGGCGTACTGGAGGGCAGTGCTGCTTGGGACTGAGCATATAGtGGCCAACACTGCTTCCATCGACACTGGCGAGGAGGGTTATGGGTTCCCCAAAGATCCTGAGGCAGAATACGGCTCGCACCCATGGAACCTTAAAGTGCTGGCGCGGAACCCGAACAACGTGCTGCGCTACCTCGGCCAGGTGCTGGGCGTGACGGTGCCGACCCTGCAGCTGAGCATGCTGTTCAGCACGTCCTGCTGGCACCGCGACCCGCACGGCCTGCCCTGGATCGAGTACATGCACAGCGGCGCTGAGAAGATATGGTACGGGATCCCACGCGACGAGAGCGCCAACTTCCGCCGCGCCGTCGAGACGCTATGCCCGGCCTACTGCCAAAACAAGTCCATATGGCTGGCCTCCGAGATCACCATGATCCCGCCCAACATCCTCAGCGAGCACCAAGTGCGGCTGTCCAGGCTGATACAGCGCCCCGGGGAGTACGTCCTGGTGTTCCCCGAGGCGCACTCCTGTTCCATCACCACGGGCTTCGGCATATCGGAGAGCGTGTACTTCGCTTCCAATGCGTGGGTGTCCGCCGTGTACAAGCTCTTCCAGGTTAGTGTTTCCAGGCTAGCCTCCGAGATCACCATGATCCCGCCCAACATCCTCAGCGAGCACCAAGTGCGGCTGTCCAGGCTGATACAGCGCCCCGGGGAGTACGTCCTGGTGTTCCCCGAGGCGCACTCCTGTTCCATCACCACGGGCTTCGGCATATCGGAGAGCGTGTACTTCGCTTCCAATGCGTGGGTGTCCGCCGTGTACAAGCTCTTCCAGGTTAGTGTTTCCAGGCTAGCCTCCGAGATCACCATGATCCCGCCCAACATCCTCAGCGAGCACCAAGTGCGGCTGTCCAGGCTGATACAGCGCCCCGGGGAGTACGTCCTGGTGTTCCCCGAGGCGCACTCCTGTTCCATCACCACGGGCTTCGGCATATCGGAGAGCGTGTACTTCGCTTCCAATGCGTGGGTGTCCGCCGTGTACAAGCTCTTCCAGGTTAGTGTTTCCAGGCTAGCCTCCGAGATCACCATGATCCCGCCCAACATCCTCAGCGAGCACCAAGTGCGGCTGTCCAGGCTGATACAGCGCCCCGGGGAGTACGTCCTGGTGTTCCCCGAGGCGCACTCCTGTTCCATCACCACGGGCCTCGGCATATCGGAGAGCGTGTACTTCGCTTCCAATGCGTGGGTGTCCGCCGTGTACAAGCTCTTCCAGGTTAGTGTTTCCAGGCTAGCCTCCGAGATCACCATGATCCCGCCCAACATCCTCAGCGAGCACCAAGTGCGGCTGTCCAGGCTGATACAGCGCCCCGGGGAGTACGTCCTGGTGTTCCCCGAGGCGCACTCCTGTTCCATCACCACGGGCTTCGGCATATCGGAGAGCGTGTACTTCGCTTCCAATGCGTGGGTGTCCGCCGTGTACAAGCTCTTCCagGAGCTGCGTAACAGTTGCGAGCCCACAATGTTCTCGCTAGAACAGCTGCTGGTGAACGGCAGCAAGGACGAGTCTGCTCCAGCACAGCTGTTCACCGTGCTCTGCACGCTGCTGGGCGCGGAGCTCGAGCACCGGAGAGCGCTGGAGAGGAAGGGGCTCCACGTGCAACAGCGCCCTCCGTCCGGTTTGCCGCTGAACACCTCCTACTTCCGCGCCTGGAACACGCGGGCGCACGACGAGTGCGAGTACTGTCGAAGTACTCTATACTTATCAAAGgtgaTCGGACTCACGGGCCGCAACTCCGCCGTGTGCCCCGAGCACGCCCTGCGCCTGCtggaaacaaaaaaacacaagaACGTGGACGTCTCCACATTGGAGTTCCTGTCCCCCTACTCCTCGCGGACCCTCGAGGAGATGGTGGAGAAGCTGGAGAACCGCTCCGGCCACGAACAGGAACTGGTGATCGACCTGACGGCTCCTTCGCCTGTGCCGACGGCTGGGAGCAGAAAAGGTACAACACCCGAGGCGTGGTCTAGAAGTGTGGTTAtcctgttcttcaagaaaggcgATAAAACGCTCTTGAAGAACTATCGACCGATATCACTTCTAAGCCACGTCTATAAGCTGTTCTCGAGAGTCATCTCAAATCGTCTCGCCCGAAGGCTCGACGACTTCCAACCTCCGGAACAggccgggtttcgaaaaggctACAGTACCGTGGACCACATTCACACCTTACGGCAGATTGTACAGAAGACCGAGGAGTACAATCGCCCTCTTTGCCTtgcgtttgtggactacgaaAAAGCCTTCGACTCCATCGAAACTTGGGCCGTTCTTGAGTCGcttcagcgatgccaagtcgattggcgatacatcGAGGTGCTGAAATGCTTATATAGAGCCGCTACGATGACCGTCCAAATCCAGGATGTCCAGACGCGTCCAATCCCATTGCAACGCGGAGTGAGAcagggagacgttatctctccgaaactgttcacgAACGCTCTGGAGGACGTATTTAAAACACTGGACTGGAATGGACGGGGcatcaatataaaatatatttcacacCTTCGATTCGCCGACGACATAGTCATTTTGGCTGAATCGCTGGAGGACTTGTCGGAGATGTTGCGGAGCCTAAATGTTTCTTCCAGACGGGTGGGTCTGGGAATGAATGTGgataaaactaaagttatgttcaattcattcgtagacccaataccgatcaccgtcgataatgttagcatcgaagttgttaaagagtacacgtacctagGCCAGATGGTCCAGCTAGGTAGAAACAACTTCGACAAGGAAGCTGACAGAAGAATCaggttgggctgggcagcatatgggaagttgcgccatatttttcagtcatcatcactgccccagtgccttaagtccaaagtcttcgaccagtgcgtccttccggtccttatttatggggccgagacgtggacactaacaaaaggcctcgtccacaaattccaagttgctcaacgagctatggagagggctatgctcggagtttctctgaaggacaaaatccggaaccaggagatccgacggagaaccaaagtgaccgacatagtccttaagatatgcaagttgaagtggcagtgggcggggcatatttgtcgtagagccgatggtcgatggggcagacgagttctagagtggagaccacgaacgacacgccctgtaggacggcctcccgccaggtggaccgacgacctaaaaagagtggcgggaagcggttggatgcggaaagctgaggaccgggtatggtggcgcgaactggggaaggcctatgtccagcagtggacgactccgggctga
Protein Sequence
MSQDPILYFEKIAPQASLHGLCKIVPPASFKPPCNISDTIRFAVIYQYISKMYSRWGPVTRELAAIKAHLRTQSVVFARSPLSLGTRDQRTGGYQGPSKDSECRLRQVSSSKYLYVRVVDKIVPSASFKPPGNISDTIRFAVIYQYISKMYSRWGPVTRELAAIKAHLRTQSVVFASVVDKIMPPPSFKPPSNIGETIRFAVIYRYISKMYSRWGPVTRELAAIKAHLRTQSVVFAMSHLLDGSEVNLPKLYHVVERHGGLNNVMQRKRWGRVADEMKLTKLQHPERKLDPIYMRYLLPYATLSDKERQAIMSEVEKYWTLKYQKMLKRARNPFQRQARMLSAETENESSDDERDDTSTAGALREAEDCIVPGRAMNLATFKKVATALMDAQFEPKNQPPNPIEVEKAYWRAVLLGTEHIVANTASIDTGEEGYGFPKDPEAEYGSHPWNLKVLARNPNNVLRYLGQVLGVTVPTLQLSMLFSTSCWHRDPHGLPWIEYMHSGAEKIWYGIPRDESANFRRAVETLCPAYCQNKSIWLASEITMIPPNILSEHQVRLSRLIQRPGEYVLVFPEAHSCSITTGFGISESVYFASNAWVSAVYKLFQVSVSRLASEITMIPPNILSEHQVRLSRLIQRPGEYVLVFPEAHSCSITTGFGISESVYFASNAWVSAVYKLFQVSVSRLASEITMIPPNILSEHQVRLSRLIQRPGEYVLVFPEAHSCSITTGFGISESVYFASNAWVSAVYKLFQVSVSRLASEITMIPPNILSEHQVRLSRLIQRPGEYVLVFPEAHSCSITTGLGISESVYFASNAWVSAVYKLFQVSVSRLASEITMIPPNILSEHQVRLSRLIQRPGEYVLVFPEAHSCSITTGFGISESVYFASNAWVSAVYKLFQELRNSCEPTMFSLEQLLVNGSKDESAPAQLFTVLCTLLGAELEHRRALERKGLHVQQRPPSGLPLNTSYFRAWNTRAHDECEYCRSTLYLSKVIGLTGRNSAVCPEHALRLLETKKHKNVDVSTLEFLSPYSSRTLEEMVEKLENRSGHEQELVIDLTAPSPVPTAGSRKGTTPEAWSRSVVILFFKKGDKTLLKNYRPISLLSHVYKLFSRVISNRLARRLDDFQPPEQAGFRKGYSTVDHIHTLRQIVQKTEEYNRPLCLAFVDYEKAFDSIETWAVLESLQRCQVDWRYIEVLKCLYRAATMTVQIQDVQTRPIPLQRGVRQGDVISPKLFTNALEDVFKTLDWNGRGINIKYISHLRFADDIVILAESLEDLSEMLRSLNVSSRRVGLGMNVDKTKVMFNSFVDPIPITVDNVSIEVVKEYTYLGQMVQLGRNNFDKEADRRIRLGWAAYGKLRHIFQSSSLPQCLKSKVFDQCVLPVLIYGAETWTLTKGLVHKFQVAQRAMERAMLGVSLKDKIRNQEIRRRTKVTDIVLKICKLKWQWAGHICRRADGRWGRRVLEWRPRTTRPVGRPPARWTDDLKRVAGSGWMRKAEDRVWWRELGKAYVQQWTTPG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-