Basic Information

Insect: Apotomis capreana
Gene Symbol: THAP3
Assembly: GCA_947623375.1
Location: OX392523.1:5717758-5732909[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.4 4e+02 2.8 0.4 1 10 374 383 374 396 0.72

2 11 0.34 31 6.3 0.7 1 23 403 426 403 426 0.93

3 11 0.48 44 5.8 0.2 1 23 430 452 430 452 0.92

4 11 0.0053 0.48 12.0 1.0 1 23 457 480 457 480 0.98

5 11 0.0035 0.32 12.5 0.7 1 23 484 507 484 507 0.96

6 11 8.8 8e+02 1.8 0.1 2 21 520 539 520 540 0.85

7 11 0.16 15 7.3 0.2 2 23 593 615 592 615 0.96

8 11 0.012 1.1 10.9 0.5 2 20 631 649 630 652 0.92

9 11 7e-06 0.00064 21.0 2.5 1 23 658 680 658 680 0.99

10 11 0.0003 0.027 15.9 2.8 1 23 687 709 687 709 0.98

11 11 0.00014 0.013 16.9 3.0 1 23 715 738 715 738 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.4	4e+02	2.8	0.4	1	10	374	383	374	396	0.72
2	11	0.34	31	6.3	0.7	1	23	403	426	403	426	0.93
3	11	0.48	44	5.8	0.2	1	23	430	452	430	452	0.92
4	11	0.0053	0.48	12.0	1.0	1	23	457	480	457	480	0.98
5	11	0.0035	0.32	12.5	0.7	1	23	484	507	484	507	0.96
6	11	8.8	8e+02	1.8	0.1	2	21	520	539	520	540	0.85
7	11	0.16	15	7.3	0.2	2	23	593	615	592	615	0.96
8	11	0.012	1.1	10.9	0.5	2	20	631	649	630	652	0.92
9	11	7e-06	0.00064	21.0	2.5	1	23	658	680	658	680	0.99
10	11	0.0003	0.027	15.9	2.8	1	23	687	709	687	709	0.98
11	11	0.00014	0.013	16.9	3.0	1	23	715	738	715	738	0.93

Sequence Information

Coding Sequence: ATGCGGTGCAGCGTACAGAACTGTTCTAACGACACGAAACGAACAACAAAAAGCCATGGGATTACATTTCACATGTTTCCCAAAGAGCCTAATCTGCGGAGTGCTTGGATGGAGGCACTTGGAATCTCTGACTGGGAGCCAAAGGACCGAAGCACAATATGCTCGGAGCATTTCCGGAATGAAGACTTCTATGAGACCAAGTGTGGGCTGCGCAAGATCAAGAATGGTGCAGTGCCTGTCGTGGGTCAGGGTTTAGCAGATGACTTAGATGCTCCAGCCGCTTTGAGGGTGTGCAGAATATGTCTAGCAACAGACAGCAAGATGTACAACATCAGGGATTACAGGCTGGAGCAGGCGTTCGCCGAAGTTAGCGGAATGACGATGGGCGATGAAGACAAGTTGCCGCAGCGATTATGCTGGGAGTGTTGCTGGCGGTTGCTGTCGGCGGCTCGTTTCAAGGGCAAAGTGCTGAGAGCCCACGATCTCCTGACTGGCCTTCCTCATACCGGACCATATATCACAATACGCGACATCCGCTCTATAAACCGCAGACAAAACCAGCTAAGATCCCAGCTCACGTACCGACATCACGACCCTAACGACTACCACATACACGTCAAGGATGACCAAATCATTATCAAGTCTGAAATCAAAGACGCAGAAGAAATTGACGAAAAAGTACCACCCATAGCCGAAGTAGAACTAATAAAAGACGAAAAGAACAATACAGATTTGTTTTACGATGAATTCAATAATTACGACGGCAATGATTTTAACAACGACTGTAATGACAATGAGTATGTTAATGGTAGTGCGGCTTTGTGTAATGATGTGGAAGCTGCTGATAGTGACGATAAAGTGCTGAGTGAAGTGTATGTGAAGAAGAAGCGGAAAGTTAAAAAAGTTAAAGTGAAAAAGAAGGAGAAGGTTGTGAAGAAGAAGGAGGAAGAAGACAATCCCATGACCACTATGGATAAGTACAAAAACTCGGACGTGAAACGTCGCAAAACCACCGACGGGCTCGACGAGTCACTCTTCACCATCACAACTCTCAGCTACGACGAGCAAATAGCCGAGATCCAGAAGCGACAGGAGAGCACGAACTACAAGAGCGCTCCATACAAATGCTCTGTGTGCTACCGCGGGTTCTTAGTACGAGATCGGTACGACGCGCACGTTGTGAGACATAGTGAGCAATCCGGTGCGTACGAGTGTTTCATATGTAAGAGCCGGCTGAAGAGTGGCCGTGCGCTACGTAAACACTTAACTGCCCAGCACACGGAGAAATTTAGCTGCAAGGGCTGTCCTTTCGTCACAAGAAACAGGGGTGTAGCACGTGAACATGAAAAATGGCATGCTGGTACGAAATATCAGTGCCCGCACTGTCCTAGCGAGTTCGACAAACTGACGACATACATGGGCCACATTAGGATAAAGCACGTGTCCGACTTCGTGTGCGAACTGTGCGGCTACACGTTTGTCAGCAAGAAGGGTATCGACGTGCACAAGAAAAAGAAGCACCGGCTGGCCGACAAGACGGTGACACTAGAAGGCCCGTACTGTGACACCTGTGAAGTCCGCTTCGTGTCGGAAGAGGCGCACGCGCGACACCTTAAACTGTCGTCGCGACACAGCAGCGACAGCGACCCGAACAGGATCCGGAATGACTCGCAAAGCATAAACGCAGACAAGAATGGCAGAGTGATCCGGAAAGTGGAGCGTCGGCCGGTCATTAATGCGCGCGACGGTGAACGACAGGACATCGGGGGTCCAGTGTCCTGTGAACAGTGCGGCATCCAACTGCGGGACCTCCGGCTGTACGCGCAGCACTTCCGGCGCGCGCACCCCGACAAGAACCGCACCAAGTACCCCGCCATGAAGACGCCGTGCATGTGCGAGCAGTGCGGCAGAATCTTCCAGAGCATGGCGCTCCTAAAAGACCACATGTGGGTGCACACCGGCGAGAAGCGGTTCAAGTGCGACCGCTGCGACAAGAGCTTCACGCAGAAGACCAACCTCGTGTTCCACATGCGCGTGCACAGCGCCACGCGCCCGAGCTACGAGTGCCCCTTGTGCGGGAAGCACTTCGCCTTCTTCAACAACCGCAGGAGACATATGTTTATTCACACCGGCTTAAAACCGTTCAAGTGCGAAACATGTGGCAAGTGTTTCACGACATCAGGCGAGCAGCGAGCACACGTCGAGCACGTTCATCTTAAAAAACCTTGGCCCAAGCGGCAGCGGCACAGGGACGGCGAGCCAGCGCCTTGGCAGAAGTGCCTAGACCCTATGGAAGACTAG
Protein Sequence: MRCSVQNCSNDTKRTTKSHGITFHMFPKEPNLRSAWMEALGISDWEPKDRSTICSEHFRNEDFYETKCGLRKIKNGAVPVVGQGLADDLDAPAALRVCRICLATDSKMYNIRDYRLEQAFAEVSGMTMGDEDKLPQRLCWECCWRLLSAARFKGKVLRAHDLLTGLPHTGPYITIRDIRSINRRQNQLRSQLTYRHHDPNDYHIHVKDDQIIIKSEIKDAEEIDEKVPPIAEVELIKDEKNNTDLFYDEFNNYDGNDFNNDCNDNEYVNGSAALCNDVEAADSDDKVLSEVYVKKKRKVKKVKVKKKEKVVKKKEEEDNPMTTMDKYKNSDVKRRKTTDGLDESLFTITTLSYDEQIAEIQKRQESTNYKSAPYKCSVCYRGFLVRDRYDAHVVRHSEQSGAYECFICKSRLKSGRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLADKTVTLEGPYCDTCEVRFVSEEAHARHLKLSSRHSSDSDPNRIRNDSQSINADKNGRVIRKVERRPVINARDGERQDIGGPVSCEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCDKSFTQKTNLVFHMRVHSATRPSYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCETCGKCFTTSGEQRAHVEHVHLKKPWPKRQRHRDGEPAPWQKCLDPMED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00325875;
90% Identity: iTF_00772957;
80% Identity: iTF_00148535;