Acap022184.1
Basic Information
- Insect
- Apotomis capreana
- Gene Symbol
- -
- Assembly
- GCA_947623375.1
- Location
- OX392521.1:469881-482119[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00046 1.2 10.2 0.0 3 44 36 70 35 70 0.93 2 10 0.013 34 5.6 0.2 17 44 81 104 77 104 0.83 3 10 0.01 27 5.9 0.1 17 44 127 150 118 150 0.84 4 10 0.01 27 5.9 0.1 17 44 173 196 164 196 0.84 5 10 0.01 27 5.9 0.1 17 44 219 242 210 242 0.84 6 10 0.01 27 5.9 0.1 17 44 265 288 256 288 0.84 7 10 0.01 27 5.9 0.1 17 44 311 334 302 334 0.84 8 10 0.0049 13 6.9 0.1 12 44 352 380 345 380 0.82 9 10 0.01 27 5.9 0.1 17 44 403 426 394 426 0.84 10 10 0.0047 12 7.0 0.2 12 44 444 472 436 472 0.82
Sequence Information
- Coding Sequence
- ATGCCACGAAGACATAAAACTGGCCTGGACTGCACGTCCCACCAGCAGCACCAGCTGCAGAAGAAGAAATTTAGTCAAAAAGAGGACTCCGACTCGCAAGGCGACGCGTGGAGCTTCTTCGAGCGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCCGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTCCGCACCAGGCACCCCAAGCTGCTGGACGCGGGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCTGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTCCGCACCAGGCACCCCAAGCTGTTGGACGCGGTAAATACCCATAGTAGTCTCACACGCTTCTTCGAGGGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCCGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTCCGCACCAGGCACCCCAAGCTGTTGGACGCGGTAAATACCCATAGTAGTCTCACACGCTTCTTCGAGGGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCCGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTCCGCACCAGGCACCCCAAGCTGTTGGACGCGGTAAATACCCATAGTAGTCTCACACGCTTCTTCGAGGGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCTGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTCCGCACCAGGCACCCCAAGCTGTTGGACGCGGTAAATACCCATAGTAGTCTCACACGCTTCTTCGAGGGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCTGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTCCGCACCAGGCACCCCAAGCTGTTGGACGCGGTAAATACCCATAGTAGTCTCACACGCTTCTTCGAGGGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCCGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTCCGCACCAGGCACCCCAAGTTGATGGACGCGGTAAATACCCATAGTAGTCTCACACGCTTCTTCGAGCGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCTGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTCCGCACCAGGCACCCCAAGCTGCTGGACGCGGTAAATACCCATAGTAGTCTCACACGCTTCTTCGAGGGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCCGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTGCGCACCAGGCACCCCAAGCTGATGGACGCGGTAAATACCCACAGTAGACTCACACGCTTCTTCGAGCGATGCGGCGCCGACGCGCGCTGCGCCGTCTGCCGCGCTGTCGTGCCCAAGGATCAGCTGCGCGAGCATCTGCGCACCAGGCACCCCACAAGCTGTTGGACGCGTTTATCGCCAGTTTTCGGCTTGAAGCTTACGCAGATCCACCTCCACCACGTCTCCCTAGCGGTAATTGAGACGACCGACCGGTCCATAGTAGACTCACAAACATTTTCTAGTGCTGCAGCGATCCGCTGCGATGAATCGGAGGAGGAGGCGAACAACACACAAGAGGACGTCTACACCGAAATAGTGTTCCTGGAAAATGAGGAAACCACAAAGAAAACTCCAAAAGCTGAAAAAGTTAAAAAACCTAGAAAATCCGCCAAAATTGAGGCCTTGAAACGAAGACTAAGTTCCTCTTCAGACGAGGAGCCACTGAAATTTAAGAAGAAGGAAAACGACGATGAAATCGAGCAATTCGGGAAATATATAACGTGCTTACTAAAGAAAGTACCGCAAGAAGTGTCTATGGAACTTCAAATGGATATTGTCAACTTGATAATGAAGAAACAGCTAGAATTAAAAAGAAAGGAAGCGCCAATTTTGGTGGCAACACTGGCGACCGAAAACAAAATGGCGGAGTGCTCCGCGCGGCGCCGGCCGCGCGCCAGTCTAATAGGGCGGCGCTGTCGCCCGCGGGGCTCCAGCCGCGGCCGGGGCCCTCGGCACAAGGACCGGGGGCTCCGACAGCAGCCGCGAGCTCGGAGGGAGGCGCCGGGCCGCGCGGGGCGCGAGGCCGCGCCGGGGGGCTCCGTCGCCCGCCCGAGCGCGACGCGGTCTCTATTTTTTTGTGTTTTTCTCAAGTTTTATGGAAGAGACTCGCGCCGCGGGCGGACGGGCGGCGAGGCGCGCCGGCGCCGCACTTAA
- Protein Sequence
- MPRRHKTGLDCTSHQQHQLQKKKFSQKEDSDSQGDAWSFFERCGADARCAVCRAVVPKDQLREHLRTRHPKLLDAGCGADARCAVCRAVVPKDQLREHLRTRHPKLLDAVNTHSSLTRFFEGCGADARCAVCRAVVPKDQLREHLRTRHPKLLDAVNTHSSLTRFFEGCGADARCAVCRAVVPKDQLREHLRTRHPKLLDAVNTHSSLTRFFEGCGADARCAVCRAVVPKDQLREHLRTRHPKLLDAVNTHSSLTRFFEGCGADARCAVCRAVVPKDQLREHLRTRHPKLLDAVNTHSSLTRFFEGCGADARCAVCRAVVPKDQLREHLRTRHPKLMDAVNTHSSLTRFFERCGADARCAVCRAVVPKDQLREHLRTRHPKLLDAVNTHSSLTRFFEGCGADARCAVCRAVVPKDQLREHLRTRHPKLMDAVNTHSRLTRFFERCGADARCAVCRAVVPKDQLREHLRTRHPTSCWTRLSPVFGLKLTQIHLHHVSLAVIETTDRSIVDSQTFSSAAAIRCDESEEEANNTQEDVYTEIVFLENEETTKKTPKAEKVKKPRKSAKIEALKRRLSSSSDEEPLKFKKKENDDEIEQFGKYITCLLKKVPQEVSMELQMDIVNLIMKKQLELKRKEAPILVATLATENKMAECSARRRPRASLIGRRCRPRGSSRGRGPRHKDRGLRQQPRARREAPGRAGREAAPGGSVARPSATRSLFFCVFLKFYGRDSRRGRTGGEARRRRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -