Basic Information

Gene Symbol
grh
Assembly
GCA_947623375.1
Location
OX392501.1:16041373-16090999[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-09 4.7e-05 23.8 0.0 29 67 768 806 754 818 0.87
2 2 1.5e-47 1.9e-43 149.4 0.3 80 221 869 1006 861 1008 0.96

Sequence Information

Coding Sequence
ATGAGTGAGTCAAGTCGAGGTGTCGTGAGTGATACGTCACTTTTAGAATGTGGGCAGCGGGCAGCTCCGTCGTGGCTATCTGAAGTGGAGTTTGATAATAAGGCAGGGCCGAGTCAATCGGATATTGTATTGGACGCTGAGTCCATGTCGGATGTGCGGCAGCGGCATATAGCGGTGAAGTGTGCTTGTGAGAGCGAGCCACAACAAGAGGTTCGTAAGCCGCGGAAGTCAAAAAGAGTAACAGATGTGAAGAGGTCCGAGTGTCTATTGGTCAAGCAGCCTACTATTGAGCGGGCTGATATGGAAGATAAAAGACAAAATAAGGACAAGAAGAAGAGACGTATTACTTTTGAAAGGCTGGTTGAGAAGACGAAGGATATTTTGAAAAGTTGGGAGGAGAAGTTCAAAACGCTGTTTGGAGTTGTTGTTAAGGAGATTTTGGATTTTTTTAAGGAAGGTGATTTTgtggactcagactgcgctggacgccctggatacgagggtccgtcagctgctcactacacaccgcatgaggcacccacgctcgtcagttacgagaatgtacctacatcccgctgtgagattcatcgcgatgtagtagcagttgacaaaggcctcacctctctctccttagcaaatgagaactggcgcagaccaaaggtgcttagcaccgatgaccgcagggctgtatggaagagcaaggagctacacgggcggttctataaggcccttacggggcccgatgtagatctgctcgcgtcggtgaactggctacgcttcggggatctcttcggggaaaccgaaggttttgtctgtgcaattgcggacgaagtaatgatgacgaacaattaccggagatatattctgaaggacggtacggtcgacatttgtcgggcatgccgccgtcccggtgagtcactcaggcatataatctccggttgttctcatcttgctaacggcgagtacttgcacagacataaccaagtagccaggatcattcaccagcaacttgctcttcgatacggtcttgtggggtctgaggtgccgtactataagtacgcaccgatgccagttctcgaaaatggtcgtgccacgctctattgggatcgatctatcatcacggacaggactattgtagccaataagcctgatatcgtgttggtagatcgatctaagtgccaggcagtgctcgtcgtcatcaccatcccgcatgacgagaacctcgtgaaggccgagaaggacaaactcagcaagtaccttgacttggctcacgaggtgaccgccatgtgggatgttgactcgacgatcattgtgccgatagtcgtttcggcgaacggtctcatagcgaagagtctcgacaaacatcttaagagactctcgctagatggctggatcaagggtcagatacagaaagcgGGTAATGATAGCGCGCGAATAGTACAGTGCAACAAGTGTAAGGACGCTGCGCAGGCGCTACTCTTGAGCTCGGTCTCAGCGCGAGTAGCGCGCGCGCATCGTCGGCGCCAATCACCGCCGTCTCCCCTCCGCAGGGCCGGCGCGGCGCTCAAGGCGGCCAATGGCGCGCACGGGGCGGAGCTGGGCGAGCTCTCCGGGTTGCTACACGCGGGGCTCGTGAAGCGCGAGCCAGAGGACCTCAGCCGCAAGGTGGCCGACGAGCCCGAGCACGCGCACGCGCTCAAGCCGCCGCGACACAAGGTGGCGGTGGGCGAGGCGAGCGAGGCGGCGTCGCCGTCGCCGGTGCCGTCGCGCGCCTCCTCGGCCGGCTCGCTGCTGCCGGACGCTGCCATGTACGCCGCGCAGATGTTCGCGCCGCCCGGCACCCCGAGCCCCACGCCCTACGGCGACCAGTACTCGCGCCAGCCCTCGGGCGCGACCTTCGCCGCGGAGCCCTACTACAGAGAGTACTTCGTGGGCGAGAGCTACCAGCAGAGGTCGGCGCCGCCCTACGGAGAAGAGGCCGCGCCGGGGTCGGCGTTCGGCGAGCGGTACGCGGCGCCGCGCTACCACAGCAAGAGCGTGATCGCAGCGGCCGGGCTCACCGTGGACCTGCCCTCGCCGGACAGCGGCATCGGTGCTGATGCTGTCACCCCTCGGGACCACAACGCCGTGCAGCAGTCGTTCGACTACACGGTGATCTGCCAGCAGCCGCCGGAAGACGGGCGCGGCACGCCGTCGGCGCACCACTCGCCCGTGCAGCCCCCGCGCACGCGCCCCTGGCACGACTTTGGCAGACAAAATGACGCCGACAAGATACAGATTGCCAAATTGTTTTCACCATACGGCTTCAAGTACCACCTGGAGACGGCGAGCAGCAGCTCGCAGCGGCGCGAGGACGACCGCATCACCTACATCAACAAGGGGCAGTTCTACGGCATCACGCTCGAGTACGTCCACGACCCCGACAAACCCCTCAAGAACCAGACGGTTAAGATAGGGTCTGATGGATGGGCGCCGCGCCCTGTGGCTAACGAGGAAGTTCCCGGGCAAAAGGACGAGGACGAAACGACGCCAGCGCAGCGCCGAACCGACTGCAGCGCTGCCCTCGCCGCGCCTGCGCCGGCTTACATAACGCTCGTATGCATTAGCGTGGTGATGCTGATGTTTAGGGAAGAAAAATCACCTGAGGACGAAATAAAAGCGTGGCAGTTCTGGCACGGGAGACAACATTCAGTCAAACAAAGGATACTGGACGCCGACACGAAGAACAGCATCGGGCTGGCGGGCTGCATCGAGGAGGTGTCGCACAACGCCATCGCCATCTACTGGAACCCGCTCGAGAGCGCCGCCAAGATCAACATCGCAGTCCAGTGTCTCAGCACAGACTTCAGCAGTCAAAAGGGAGTCAAGGGCTTGCCGTTACACATTCAGATTGACACGTTTGAAGACCCCCGCGACACGCAAGTGTATCACAGAGGATATTGTCAAATCAAAGTGTTCTGTGACAAGGGCGCCGAAAGAAAAACAAGAGATGAAGAGAGAAGAGCGGCTAAAAGAAAAATGTCAGCGACGAATAGAAAGAAGCTGGACGAGATTTACCACCCAGTGACAGAGCGAAGCGAATTCTATTCAATGGCTGACTTGGCAAAACCGCCGGTGCTGTTCAGTCCGGCGGAGGACATCGACAAGCTGACGGGCATGGACATCCAAGGGTTCTACGGCCACGACGAGTCGGCGTTGGCGGAGGCGCACCTCAAGGGCGCTTCGCCGTTCCTCCTGCACGCCGCCAAGCCGCAGGCGCCGGCGCTCAAATTCCACAACCACTTTCCCCCCGATGCACCAGCGTACAGGTCGGACGTGGGTAGCCTGTCACCATACGGCGACCGCAAAGACACGCTAGAGTTGGAGGGCGTGCTGGGCAAGCGCGCGCGCACCGGCACGCCGCCGCTCAGCGAGCGCGTCATGCTGTACGTGCGCCAGGACACGGACGACGTGTACACCCCGCTGCATGTCGCGCCGCCCACCACGCAGGGGCTACTCCACGCGATTGAGAATAAGTACAAAATTTCAAGTTCGGCAATTAATAATCTTTATCGAAAGAACAAGAAAGGGATTACGGCCAAAATTGACGATGAAATGATAGCTTACTACTGCAACGAGGACCTGTTTTTGCTGGAGGTGCGGCCGGCGGGCGCCAGCGAGGAGGAACCGCTCTACGACATCACGTTCGTGGAGCTACCTCTGGACCACTAG
Protein Sequence
MSESSRGVVSDTSLLECGQRAAPSWLSEVEFDNKAGPSQSDIVLDAESMSDVRQRHIAVKCACESEPQQEVRKPRKSKRVTDVKRSECLLVKQPTIERADMEDKRQNKDKKKRRITFERLVEKTKDILKSWEEKFKTLFGVVVKEILDFFKEGDFVDSDCAGRPGYEGPSAAHYTPHEAPTLVSYENVPTSRCEIHRDVVAVDKGLTSLSLANENWRRPKVLSTDDRRAVWKSKELHGRFYKALTGPDVDLLASVNWLRFGDLFGETEGFVCAIADEVMMTNNYRRYILKDGTVDICRACRRPGESLRHIISGCSHLANGEYLHRHNQVARIIHQQLALRYGLVGSEVPYYKYAPMPVLENGRATLYWDRSIITDRTIVANKPDIVLVDRSKCQAVLVVITIPHDENLVKAEKDKLSKYLDLAHEVTAMWDVDSTIIVPIVVSANGLIAKSLDKHLKRLSLDGWIKGQIQKAGNDSARIVQCNKCKDAAQALLLSSVSARVARAHRRRQSPPSPLRRAGAALKAANGAHGAELGELSGLLHAGLVKREPEDLSRKVADEPEHAHALKPPRHKVAVGEASEAASPSPVPSRASSAGSLLPDAAMYAAQMFAPPGTPSPTPYGDQYSRQPSGATFAAEPYYREYFVGESYQQRSAPPYGEEAAPGSAFGERYAAPRYHSKSVIAAAGLTVDLPSPDSGIGADAVTPRDHNAVQQSFDYTVICQQPPEDGRGTPSAHHSPVQPPRTRPWHDFGRQNDADKIQIAKLFSPYGFKYHLETASSSSQRREDDRITYINKGQFYGITLEYVHDPDKPLKNQTVKIGSDGWAPRPVANEEVPGQKDEDETTPAQRRTDCSAALAAPAPAYITLVCISVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSIGLAGCIEEVSHNAIAIYWNPLESAAKINIAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDTQVYHRGYCQIKVFCDKGAERKTRDEERRAAKRKMSATNRKKLDEIYHPVTERSEFYSMADLAKPPVLFSPAEDIDKLTGMDIQGFYGHDESALAEAHLKGASPFLLHAAKPQAPALKFHNHFPPDAPAYRSDVGSLSPYGDRKDTLELEGVLGKRARTGTPPLSERVMLYVRQDTDDVYTPLHVAPPTTQGLLHAIENKYKISSSAINNLYRKNKKGITAKIDDEMIAYYCNEDLFLLEVRPAGASEEEPLYDITFVELPLDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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