Anig005381.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aporophyla nigra
Gene Symbol
nfxl1
Assembly
GCA_947507805.1
Location
OX382303.1:2680305-2682785[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 17 0.0053 1.5e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 17 1.6e-07 0.0044 17.6 15.9 3 19 186 202 185 202 0.95
4 17 6.8e-08 0.0019 18.8 10.8 3 19 239 255 237 255 0.92
5 17 0.84 2.4e+04 -3.9 1.9 6 10 280 284 279 284 0.83
6 17 2e-09 5.5e-05 23.7 11.9 1 19 290 308 290 308 0.99
7 17 2.2e-06 0.063 13.9 18.5 3 19 345 361 337 361 0.88
8 17 0.62 1.7e+04 -3.4 0.4 7 11 365 369 365 369 0.84
9 17 3.3e-05 0.94 10.2 20.3 1 18 395 412 395 413 0.97
10 17 2.2e-10 6.3e-06 26.7 14.0 1 19 422 440 422 440 0.99
11 17 0.0031 87 3.9 10.9 10 19 489 498 486 498 0.90
12 17 0.00059 17 6.2 6.9 1 12 508 518 508 518 0.90
13 17 0.16 4.4e+03 -1.5 3.5 14 18 547 551 547 552 0.87
14 17 0.061 1.7e+03 -0.2 0.5 7 12 567 572 567 579 0.83
15 17 4.5e-06 0.13 13.0 5.3 1 11 588 598 588 599 0.97
16 17 4.6e-05 1.3 9.7 12.8 4 18 630 645 628 646 0.86
17 17 5e-07 0.014 16.0 9.3 1 18 687 705 687 706 0.88

Sequence Information

Coding Sequence
ATGGCGCGTCGATACAGAGATGCGGCTGCAAAATTACAGCAAAACGTCCAGAAACATCTAAAAGTAATGAAAGAACTGTCGTCGTCTGAAGATGAGGATCCTTGCGAATCCAACGTCTTGGAAAGCATGTTCCAGAGCTACTGGCGCGGCGGCGGAGACACTCAAATGCTAAACAGAACCAAAAATCTTCTTGAAGAAGCCATAAGCGGCCGTTCTGTTACGTGTCTTATATGCATAGGATCGATAAAAAAATCTCACGCTATATGGACTTGTGATCATTGCTTTTCATACTTCCATCTTTCTTGTATTCAGAAATGGGCAAATGATAGTATAAGCTTGCGCAGTGAAGAAAGTACAGGCCCGATAGCTGTTATTAAACAACAAAAAATCGAATGGTGTTGCCCGAAGTGCCGAAACTCTTATTCTAAGGAAGAAATCCCTCGTAAATATCGCTGTTTCTGCGGCCACACTGATGACCCACCACACCATCCTTGGCTCATTCCTCATACCTGTGGTGAAGTCTGTGGAAAGAGGTTGTCTACTGGTGAAAATTGTAAACACAAGTGCTTGCTACTATGTCACCCTGGTCCCTGCCCTCCGTGCCCACAAACTGTCAATGGCATATGTTTCTGTGAGAAGGAGCGTAAGAGAGTGAGATGCAGCGCTGCTAAATGGTCCTGTGGCCAACTTTGCAAGAAAACTCTTTTGTGTAAGACTCATTATTGTGAAAATGTCTGTCATGCAGGTGATTGTCCTCAATGTAGCTACACTAGTATTCAGCAATGTCAATGTGGTTCAGAGAAAGCTAAAAGACCATGTAATGATCCATTCTGGCAGTGTAAGAAGCCTTGTAACAAGCTATTTTCTTGTGGCTACCATAAGTGTGACAGAATCTGTCATTCAGGCAACTGTGGAGATTGCCCCAACTCTGGAATTTTATCATGTCCCTGTGGAGCTAACCAGCGCTTTGTCCAATGTCCAGATGTTATGGAAACCTGCCTAGGTACATGTGGTAAGAGGCATGAAGATTGTGATCATAAGTGCCCAGAGAAGTGCCACAATGGTAACTGCCCACCTTGCCAAGTTTTAGTTGAAAAAAAATGCCACTGCTCCACACATACAAGGTCTCTTCCTTGTAGCAAGGACTTTAAATGTGATTCTAAATGTCGCGGGATAAGGCTATGTGGCAAGCATGGTTGTGGTAGAAAATGTTGTAATGGGAATTGCCCTCCATGTGAGAAAATATGTGACAAAGGTCTCCATTGTGGTCGCCATAAATGTACAAATATATGTCACCGTGGACCATGCTATCCATGCCCTCTAGAGTCCAAAGTAACTTGCAGATGCAAAGAAACTTATATAAGAGTCCCCTGTGGAAGGGAAAGGCAGACAAAACCTCCAAAATGCAACTTGCCTTGCAAAATTAAATATAAGTGTGGTCACAGTGAAGAGAATAAACACTGCTGTCATTTTGGTGACTGCCCGCCTTGCAAAGCAATTTGCGACAAACAATATCCAAAGTGTAGTCATCGTTGTAAATCAGTATGCCATGAATATGTTGCAGTGCTATTCAAACAAGTTGAGAAACCTGCTACTCCATGGGAAGTGCAGCCGCCAAAGACCAAGATAATGACCTTAGATTGTCCGCCATGCGAAACACCAGTACCCATGGTTTGTTTTGGAGAGCATGAGACGGACCAGCAACCTTGTCATACAGCTTCACGAAGGCCTTGTGGAAGAGAATGTGGAAAACCATTGGTTTGTGGAAATCACAAGTGCACTTTACTCTGTCATCTTTACAGCCCTGTTCCAGAATACCCAAATGTGCCTTCAACTTGTAAGCAATGTAACAGAGAATGTTCAGTTCAGCGTCCTGACAAATGTGCTCATAAATGCTCTATTAGAGCTTGTCATCCTGGTCCTTGTCGGCCATGTGAAATACTTGAACGCTTAGCCTGCCACTGCGGCGTTACAGAGGTATACTTACGCTGCCGAGAATTGTCTATTGCTACTGAAGAAATGCTGTCATGCAAGCAACAATGTCCCAAGAACTTGGACTGTGGCCATCGCTGCCGTAACATATGCCATTCAGGAGCTTGCGACAACCAAGTTTGCACTAAAAAAACTAAAGTGTACTGCCCATGTGGTAGTATTAAGAAGGAGGCTCCTTGCAACTCAGTTAGAAACGGAGACACTATAATACTTTGTGACAATACCTGTGAAGCTAAGAAAGCTGCTGCTAAAATAGAACAAGAGAAAGAGAAACAGAGATTGAAAGAGCTAGAAGAAGAAAAGAACCGGAAAGAGTTAGCAGAGTATGAGTGGAAACTAAGTGGTAAGAAGAAGAAGTACAAGGAAAAGAAGATGGTGGTTGGTAAAGATGACCGGGGATTCCTAAAGCGGTATTGGGTACCAATATCATCGTTCCTAGTTATGATGCTAGCAGCTGTTTATTATATATTTTATGTTGGCTTAGAATAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLKVMKELSSSEDEDPCESNVLESMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGHTDDPPHHPWLIPHTCGEVCGKRLSTGENCKHKCLLLCHPGPCPPCPQTVNGICFCEKERKRVRCSAAKWSCGQLCKKTLLCKTHYCENVCHAGDCPQCSYTSIQQCQCGSEKAKRPCNDPFWQCKKPCNKLFSCGYHKCDRICHSGNCGDCPNSGILSCPCGANQRFVQCPDVMETCLGTCGKRHEDCDHKCPEKCHNGNCPPCQVLVEKKCHCSTHTRSLPCSKDFKCDSKCRGIRLCGKHGCGRKCCNGNCPPCEKICDKGLHCGRHKCTNICHRGPCYPCPLESKVTCRCKETYIRVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHCCHFGDCPPCKAICDKQYPKCSHRCKSVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCETPVPMVCFGEHETDQQPCHTASRRPCGRECGKPLVCGNHKCTLLCHLYSPVPEYPNVPSTCKQCNRECSVQRPDKCAHKCSIRACHPGPCRPCEILERLACHCGVTEVYLRCRELSIATEEMLSCKQQCPKNLDCGHRCRNICHSGACDNQVCTKKTKVYCPCGSIKKEAPCNSVRNGDTIILCDNTCEAKKAAAKIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLKRYWVPISSFLVMMLAAVYYIFYVGLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
iTF_01440670;
80% Identity
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