Anig024464.1
Basic Information
- Insect
- Aporophyla nigra
- Gene Symbol
- ZFY
- Assembly
- GCA_947507805.1
- Location
- OX382319.1:6665651-6693760[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.13 11 7.3 0.4 1 23 54 77 54 77 0.92 2 11 0.0051 0.43 11.7 0.1 1 23 84 106 84 106 0.98 3 11 1.7 1.4e+02 3.8 0.9 1 10 110 119 110 133 0.71 4 11 0.44 37 5.7 2.3 1 23 140 162 140 162 0.82 5 11 4.1e-06 0.00035 21.5 1.2 2 23 167 189 166 189 0.93 6 11 3.1e-05 0.0027 18.7 1.3 1 23 195 217 195 217 0.97 7 11 0.012 0.99 10.6 1.4 2 21 269 288 269 293 0.93 8 11 1.1e-05 0.00095 20.1 1.6 1 23 301 324 301 324 0.94 9 11 0.0023 0.19 12.9 0.2 1 23 329 352 329 352 0.97 10 11 5.3e-06 0.00045 21.1 2.8 2 23 360 381 359 381 0.97 11 11 5.3e-08 4.5e-06 27.4 1.4 1 23 387 410 387 410 0.97
Sequence Information
- Coding Sequence
- ATGAAAGAAGGACGGCTTACAAAAGGTATTTACAATGCAGATCTGAAAAGAGCTACAAAAGAGCGAGACCAAAAGATCTTAACCATAGAGTTGACATACGAGGAGATGTTGTTAGAAAGAGACAAAGAATCTACTAAGGAGGCGTATATGAAAGCGGAATATAAATGTGAGAGCTGCCTCATTGGGTTCAACTATAGCAAATCCTATTCAGCGCATGTAGAGGCTAAGCATTCGTCGGAATTAGGCGACTACATCTGTCCTATTTGCAAAACGATAATACCATCAGTGGACTCCTTCACGGCGCATTATAAAAGGCATATGAGAAGATATGAATGCAGTATCTGTCAGAAACGAACCTTAGACTTCAAAGTGATGCAGCAACATTACTACTCGACTCATGAGATATCACTAAAGGAATATAAATGTAATTTATGTGGGAAAATATCTAACTCCATAGACACACACCGTTACCATAAAGACACGCACAAAGCCAGAGTACAGTGCACAGACTGTGATAAAACATTCAGACATAGAGCGGGACTCAAGAACCATAGACTGGCGGTTCATGAATTTCGCAACACGTTTCCCTGCACCATGTGTGATAAAGTTTTCAGATGGAAAACTAGTCTGAAACGACATTTGGACAAACACGAAGTTAAGGCGCACGAGCCGCACACGCATCCCCGTCCGCCCGCGTCCCGCGCTCCTTTAGTCACCTGCGATGAATCTGAAGGTCTTCCTGCCTACAACACACCATATGAAGGTATGAAGGTCGAGACGGGCAAGTCTTCATCAGCTGCAGCGTATTGCTCCATGTGTAAAGTTAGCTTCTCATCTATATTCTCCTACCAGAGACATCTGAAGAACAGCCTGAAACATGTCTCTCAAGATCAGCTCAAATTCATCTGCGATCATTGCGACAAACGCTTCGCCGACAAGACGAAGCTAAGAGACCACATTGAAGAGAAACATTTGCACAAAACTTACCAGTGTCAAGTCTGTTTGAAGCCTTCTAAAAACCGTGTTGGTTTGGACCAGCATATACGGAATGTTCACAAAGGAAGACCGAACAATAAGATGTGCCATCATTGCGGGAAAGGATTTCCTACTACGGTCCAGTTGGAGTCCCACATTCGTTCCCACACCGGGGAGAGACCTTTTACCTGTGAATACTGCCCGACCACATTCTCACAGCAATCCAACTTATACAAACACATCAGACAGGTCCATCTCAACATCAAATCAAAACGCTATCCTTTGTGTAAGAAAAAAGAGGAGAAACTTCCAGACGAGCCCATACTAGACCATGTACAACCCATTATAGACCCATATAGACCGGTGCCCATGATACACTATACCACTGACAAAATGTTTGGAATGTGA
- Protein Sequence
- MKEGRLTKGIYNADLKRATKERDQKILTIELTYEEMLLERDKESTKEAYMKAEYKCESCLIGFNYSKSYSAHVEAKHSSELGDYICPICKTIIPSVDSFTAHYKRHMRRYECSICQKRTLDFKVMQQHYYSTHEISLKEYKCNLCGKISNSIDTHRYHKDTHKARVQCTDCDKTFRHRAGLKNHRLAVHEFRNTFPCTMCDKVFRWKTSLKRHLDKHEVKAHEPHTHPRPPASRAPLVTCDESEGLPAYNTPYEGMKVETGKSSSAAAYCSMCKVSFSSIFSYQRHLKNSLKHVSQDQLKFICDHCDKRFADKTKLRDHIEEKHLHKTYQCQVCLKPSKNRVGLDQHIRNVHKGRPNNKMCHHCGKGFPTTVQLESHIRSHTGERPFTCEYCPTTFSQQSNLYKHIRQVHLNIKSKRYPLCKKKEEKLPDEPILDHVQPIIDPYRPVPMIHYTTDKMFGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00831496;
- 90% Identity
- -
- 80% Identity
- -