Anig012952.1
Basic Information
- Insect
- Aporophyla nigra
- Gene Symbol
- Smarcc2
- Assembly
- GCA_947507805.1
- Location
- OX382314.1:9620840-9639256[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-15 5.2e-12 46.3 0.1 4 44 77 117 74 119 0.95
Sequence Information
- Coding Sequence
- ATGGCGATGTTTACAAAAATCATCATTATTCGTGACAGGGATGGAAGAATAACTTCAGAAGCTTCGGAGAACGTGCCAAAGGTGGAGCCGGGTCTGCCCAACGGTGCCGAGGCAGGCGCAGGGGCCGCGCCGCCCGCGCCGCCCGTCAAGCCTGAACCCGCGCTGGACCTGGCCGCGGCATCGGGGCTCAAGCTCGACCAGTACCGGGGGGGCCCGCGCGGGCGCGGCTGGACGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCGGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTATCTGCACGACGCGCAGGCTGGAGGCGTGCTAGGCCCACTGGCCTACCAACCGATCCCGTTCAGCAAAACTGGCAACCCAGTGATGTCCACGGTTGCCTTCCTAGCGTCCGTAGTGGACCCGCGCATCGCGTCCAGGGCCACGCGGGCAGCTATGGAAGAGTTCTCTGCTATCAAGGACGAGGTGCCGGCGGCGATGATGGAGGCGCACGTGAAGGCGGCGGGCGCGCACGGGCCGGCCGCCGCGCTGGCCGCCACCGGCATCGCCGGCACCGCGCCCGACCTCGCGCCGCCCGCTGAACCCAAAAAGGAGGGTACATCAGATATCAAGGCAGAACCCATGGAAGTGGAAGAGAGCGAAGCCAAGGTGAAGGACGAGCCTCAAGATACGCCCGCTGTCCCTGAGACAGAGAAGGAACCCAAGGAGGAACCAGCAGCTCAACCGGGTGCAGAAAAAACCGAAGCCCCAACGACAGTAGACGCGAAGCTTCAATCTGCAGCCGCTGCAGCGCTGGCCGCGGCCGCTGTTAAAGCGAAGCATCTCGCCGGCGTCGAGGAAAGAAAGATCAAGTCGTTAGTCGCGCTGCTAGTGGAGACACAGATGAAGAAGTTGGAAATCAAGCTGCGACACTTCGAGGAGCTGGAGGCCACTATGGAGAGGGAACGGGAAGGACTGGAGTACCAGCGCCAGCAATTAATTCAGGAGCGACAACAGTTCCACCTCGAACAGCTGAAGGCCGCAGAGTTCCGCGCGAGGCATCAAGCGCATCAAAGACTGCAGGCGGAGAGTGGCGTTGCGGGCGCAGTGTCGGCGCCGGGTGCGGTTGCGGGCGCAGCGCCGGCTGTGGGCGTGGTGGCCGAAGCGCCGCCTGAAGCCACGCCGCCGCCGCACGCCTAG
- Protein Sequence
- MAMFTKIIIIRDRDGRITSEASENVPKVEPGLPNGAEAGAGAAPPAPPVKPEPALDLAAASGLKLDQYRGGPRGRGWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDAQAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASRATRAAMEEFSAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPDLAPPAEPKKEGTSDIKAEPMEVEESEAKVKDEPQDTPAVPETEKEPKEEPAAQPGAEKTEAPTTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGVAGAVSAPGAVAGAAPAVGVVAEAPPEATPPPHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -