Anig024939.1
Basic Information
- Insect
- Aporophyla nigra
- Gene Symbol
- SNAPC4
- Assembly
- GCA_947507805.1
- Location
- OX382291.1:2653502-2655028[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 8.3 7.3e+03 -2.2 0.0 4 19 160 175 158 178 0.86 2 5 1.8e-09 1.5e-06 28.8 0.2 2 45 263 308 262 309 0.94 3 5 2.7e-07 0.00024 21.8 0.1 2 45 316 363 315 364 0.94 4 5 1.3e-10 1.1e-07 32.5 0.0 1 45 368 412 368 413 0.95 5 5 8.3e-08 7.3e-05 23.4 0.0 4 45 421 464 419 465 0.92
Sequence Information
- Coding Sequence
- ATGCAGATTGATGACATCGAGTTAGACTCTAAGACCGACTCAGAAGTCTATAGTGAAGACAATTCAATATCCGACGGTGAAAACATGAGCGAGCATCTTAACAATGACGACGCTGTACTCGGCGCCGGACAGTCGCGTAGCCACACGATGATTCAACGAACAACCAAAAGAAGCAGTGAATCCTCAGCAGCATTAGCTCAAATAGACCTAGCATTGTCGGCAAACAAATTATTAGACGAAAAGATGAAGATACTGGAAAGAGATCTCGCCTTACGGCTGAATGAGTGTCGGGAAAAACTGAAACTGGTTCAAAGTAGTGTTGATGTGCAGAATGATAAAAATGAAACTTTCCGCTACATCAATTGTGGCCGACCTTACTTTAAGGACAACCAGAACTTTCCCGCTCCAGATAATGAAGTTGCTAAATTGGTAAAATTTCAGATGTATGATCTCTCCTTAGTCATTCCAACACCTGGCTGGACAGTAAAAGACAAGTCTCAATTTGTTAACATGATGCACAAATTGTCAATAGATATTAAAAAAAATGAGTTGTATAAAAAAATTACTACCTTAAAACATAAAAATAAATCAAAAAATGTGGAGAGAGAAATAATGGCCATTAGAAAGGAAATTGATAAAGTAAGTAAATTGCCTTTGTCTATGGTAGCTCTTCCGATAGATAAGGAATATGATTGGGATATGTTAGCAAACAATTTAAATAGAAGGTACACACCACAAGAGTATCAAGCCTTCTGGAAGTTATTCTTTCATCCTTCAATTAGCAAAAGTACTTGGAGCAAATGTGAACATGCAAACTTACAGGACATTGCTTGCCGACATGGTAGACAGGATTGGGATAAAATTGCTCTTGAACTAAATACTGGCAGGACTGGGTATCAGTGTTTCGTATACTATCGGACAAATATGTCCAACTCTTTTATTGGAAAGAAATGGTCTAGTGAGGAGATCACATACCTAAAAAGACTGATAGAATATTTCAAAGAAGAAAAATACATTCCATGGGGGAAGATAGCTGCAGCAATGGAAAACCGAACTAAAATCCAAATCTACGATAAGTTTATGAATCTCATTGAACAGAGGAAAGGCAGGTTTCTCCTAGAGGAAGATTCAGTTATTCTTAACTGTGTGGAAATGTTTGGAGAGAATTTTAGGAAGATGACTTCTTATTTACCCGGCCGATCTATGATCCAGATTCGAGAGAGATACCAAGTCTTGAAGCGAATGAGAGTGTCAGCTGTATGGACTGTTGAAGATGACAAGAAACTGATTCAATTGATGGCCAACCAAGAGACCCACATGAACTTTTCAAAAGTTGCCCAATATTTTCCAAACATAAACAGAACAAAAATTAGATCTAGATATCTCACATTGGTTAAATGGTTTAAAAAAAATCCTCATTTACAATTGGAACAAGCACCACTACAAGGCGCACGAAGTTTGAATAAGGGGGAAGCTAGAGAAAATCTGATACAAGCACTAGAAAAATTTAAAAAAATATATAGTTAA
- Protein Sequence
- MQIDDIELDSKTDSEVYSEDNSISDGENMSEHLNNDDAVLGAGQSRSHTMIQRTTKRSSESSAALAQIDLALSANKLLDEKMKILERDLALRLNECREKLKLVQSSVDVQNDKNETFRYINCGRPYFKDNQNFPAPDNEVAKLVKFQMYDLSLVIPTPGWTVKDKSQFVNMMHKLSIDIKKNELYKKITTLKHKNKSKNVEREIMAIRKEIDKVSKLPLSMVALPIDKEYDWDMLANNLNRRYTPQEYQAFWKLFFHPSISKSTWSKCEHANLQDIACRHGRQDWDKIALELNTGRTGYQCFVYYRTNMSNSFIGKKWSSEEITYLKRLIEYFKEEKYIPWGKIAAAMENRTKIQIYDKFMNLIEQRKGRFLLEEDSVILNCVEMFGENFRKMTSYLPGRSMIQIRERYQVLKRMRVSAVWTVEDDKKLIQLMANQETHMNFSKVAQYFPNINRTKIRSRYLTLVKWFKKNPHLQLEQAPLQGARSLNKGEARENLIQALEKFKKIYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -