Anig025947.1
Basic Information
- Insect
- Aporophyla nigra
- Gene Symbol
- jarid2b
- Assembly
- GCA_947507805.1
- Location
- OX382291.1:32288056-32317189[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-20 1.6e-16 61.0 0.1 13 89 792 865 781 865 0.90
Sequence Information
- Coding Sequence
- ATGGCGGCTGCCGATAACCGGCGGGAAAACGCACAAGAACCGAGGCTCAATATTACTTACAGCAAAATGTCGGCTAGGAGCTTGATGGATGTCGTGGCTCTACAGGGTCACTATCAACAACTGTTCAACTCACAACCTGTAGTGCTCCTGAAGAGGCTGCGCAATTCGAGCTATCGTCTCGACACCCCGCCACCGCCGCCACCACCGCCGCCGCCACCGCCATCGCCACCACCGCCGCCGCCGCCGCCTCCGCCGCCCCCGCCCCCAGCGCGTACTGTGAACGGTGGACCTTCGGTACCCCTCCATGAACGTGCGGGCACAAGTCAACAACCGACTGATTCACCAAAATTGCAGGTTGTCAACAAAAATCAAGAAAAACAGCATTCCATGACACTAAGATCACGGAGGCCCAGCAGGCCACTGGTTGATAATCTTTTGGCCCAAAATTGTGCTCCTGTCCGAAAGGCGGGCCAGAAGCGCAATAGAAATTCATCCGACGAGGATGAACCGTTAATTTTCAAACAGACTCGGCTCAGACAGGCCACACAACGAATCAGCACTCCCACACCAGAGTCCCAGGAGTTAACATCCACAAAGAAACCTCGCAAGAGGCTTGCTAATACAGACGCACACGAGACCACTTCGGAAAAGATTACACGCGATACCAATTCAAAGCCGATTACACGCGAGGCTTCTTCAAAGACAAATGATCGTTCAAAGATTAAGCGAACAACAAATGCCAAGGGGAGTAAAGATAAGAAAAATAGCGCGCGCCAGGTCGCCCCGATTGCCTCGGTTGCCCCGGTTGACACGGTTGCCTCGGTTGTCCCGGTTGCCTCGGTCGCTCCGGATACCCCGGTTGCCTCGTTTGTCCCGGTTGCCTCGGCTGCCCCGGTTATCCCAGTTGCCATGGACGTCCCAGTTATCCCCCCCATGGAAATACAGGAGGTCGGGATGCATACTGGATCGCTGTTGCCTGCGGGTTTGGACGGAATTATATCGGCAATAGACGAGATCATGCGAGATGAACATATAGACTTCAACGACTTCTGCAATGAGCTTGAAAAAACACTCTCTCACGAAGTTGCCGTGGACAGGCCAACCGTTGAACAATCACCAGCCAATGTCGAGCCTGCTGAAAATGATGAACTGGCGTTACGGTTGCCTCCGACGCCTTGCAACGCGGCAGTGTGGCGCACCGATAAGGACGTCGCAGAAGCGCCCGAAGAATTACTGGGCGCGCGGTGCCGTGTGTGTCGACCATGCCTCAGGATAAACAAACTGATGAATGTGGCAGCTTTACTTCTACCTCAAATGGGAATAAGGAACAAGAGCAAAATAATAACCCTACAAGCAACTGAAACAAGAAATATTGAAATTGAAATAATCTACGAAACTGAAAATACGGTAAACAACGAGAATATTTACTTACTATTACCGAGTGAAGATACTGTGATGCTGCTTGTGAGCGCCACCAACGATGATGTCAAACGGGTAGAGGCGCTTGGTTTGATCCCGAGAGACGAGTCGCTGATAGATAAAGAGTTCATACTTGAGGAACAGGAAACATTATTGGATTCAATTATCAAGACCCTACGGATCGTTCATGTCACGTCGATGATGGAACGTCGACACAACAGTACAGGCGGTCGAAGCGACAATTCAACTCCAAGTAGTAGTCGCATGAAGTTGAGATGGTCATCCGACAGCGGGTCCGGCACGAGCAATGCGACCAATAACGACATAAAACGTCTCGAGAACTTAAGTCTGCTATACGAGCGAATGAGGGCGGAAATAGCGGAAAGACAAGTGGCCAGGGTTGAGAAGGAGAAGCGAAAGGCAATATTGCTCTTAACCAAGGAAAAGGATACTGCATTCGCGGAGATGAACGTCAGCAACGGGCGGATCGTAGAGATTCAGAAACAAAAGGAAATGGAAATTGCGCGTGTGAGAGCGAAGGTCCGGCACGTGCTATCAAAAATAGAGGCTAGGCGCCGCTTGATTAGTGAGGTCGACGGTATGGCGGCTAAGCTTGACAAGGAAAAGGATGCTAAACGAATGGATAGCGATGAACTCTCCGATCAAGAAGCTGGCCCCAGCTGCAACATGCTGCGCACGACTGGCGGTATATTAGTGGACGCACCTGTGTACTTCCCAACCGAACAAGACTTTCTTGATCCAATTGCCTTCTATGAAAAAATCTGGTCAGAAGTAGTTGAATATGGCATCTGTAAGGTGGTGCCGCCTACTGGGTGGAAGCCGCCGTTTAGAGTGCATGACGACATGAGGTTCGATGTCAACAACCAGTACATTTCACGACTGTTCAACCGCTGGGGGCCGGCTGCCAGGGAACTTTGCGCGATCAAGCTGTCCCTGGCGCAGCAAAAAGTTAATTTCTCACGACCACCGTTGCTGGATGGTATCGAGGTAAACTTGCCAAAATTATACCACATCGTGCAACGGCACGGCGGTCTAGAAACGGTTTACAACAAGAAGCGATGGGGCAAGGTCGCAGAAGATATGAAGTTCAATAAAGCGAATAATACTGAGAGGAAACTCGACCAGATTTACGTAAAGTTTCTGCTCCCATACGACACGCTTTCTCATCTGGAACGTCAGGACATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGCATCAGAAGCTTTTCGAGCGCGCCTTGAACCCGCTAAACCGGCAGAAGCGAATGCTTGGCTTAATAGATTCTTCTGATGATGAGACGGAGGACGAGGACGCGGTGGCTGCCATCAATGAGGCAGAAGATTGTATCATCAAGGGTGCGGTCATGAACCGAGCGAAATTCAGAAAGAAAATGGACTTTGAATTACTTAACACCAATTTACGTGCTATAATAAGAGAAATAGTATCAACTATAATAGAAAGAATAGAAAATAAGAGAAAGAGTAATCAACTCGCCCGCCTGCATGCCGGGCCAGTTAAGTTGGCGGGGCGCGGGAGACGCGAGAGAGGGGGCTACTTCGCACTGGACTCGCCAAAAATAGGATCGCGATCTATTCAACTCAACTTAATCGACAACTTACTACTTAACTCGCCTTTGCCGTTCAAACAACATTAA
- Protein Sequence
- MAAADNRRENAQEPRLNITYSKMSARSLMDVVALQGHYQQLFNSQPVVLLKRLRNSSYRLDTPPPPPPPPPPPPSPPPPPPPPPPPPPPARTVNGGPSVPLHERAGTSQQPTDSPKLQVVNKNQEKQHSMTLRSRRPSRPLVDNLLAQNCAPVRKAGQKRNRNSSDEDEPLIFKQTRLRQATQRISTPTPESQELTSTKKPRKRLANTDAHETTSEKITRDTNSKPITREASSKTNDRSKIKRTTNAKGSKDKKNSARQVAPIASVAPVDTVASVVPVASVAPDTPVASFVPVASAAPVIPVAMDVPVIPPMEIQEVGMHTGSLLPAGLDGIISAIDEIMRDEHIDFNDFCNELEKTLSHEVAVDRPTVEQSPANVEPAENDELALRLPPTPCNAAVWRTDKDVAEAPEELLGARCRVCRPCLRINKLMNVAALLLPQMGIRNKSKIITLQATETRNIEIEIIYETENTVNNENIYLLLPSEDTVMLLVSATNDDVKRVEALGLIPRDESLIDKEFILEEQETLLDSIIKTLRIVHVTSMMERRHNSTGGRSDNSTPSSSRMKLRWSSDSGSGTSNATNNDIKRLENLSLLYERMRAEIAERQVARVEKEKRKAILLLTKEKDTAFAEMNVSNGRIVEIQKQKEMEIARVRAKVRHVLSKIEARRRLISEVDGMAAKLDKEKDAKRMDSDELSDQEAGPSCNMLRTTGGILVDAPVYFPTEQDFLDPIAFYEKIWSEVVEYGICKVVPPTGWKPPFRVHDDMRFDVNNQYISRLFNRWGPAARELCAIKLSLAQQKVNFSRPPLLDGIEVNLPKLYHIVQRHGGLETVYNKKRWGKVAEDMKFNKANNTERKLDQIYVKFLLPYDTLSHLERQDIMRKVEIAWNRKHQKLFERALNPLNRQKRMLGLIDSSDDETEDEDAVAAINEAEDCIIKGAVMNRAKFRKKMDFELLNTNLRAIIREIVSTIIERIENKRKSNQLARLHAGPVKLAGRGRRERGGYFALDSPKIGSRSIQLNLIDNLLLNSPLPFKQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -