Abis012079.1
Basic Information
- Insect
- Apomyelois bistriatella
- Gene Symbol
- -
- Assembly
- GCA_947044225.1
- Location
- CAMRHB010000053.1:223452-223793[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-07 0.00023 21.2 0.0 19 44 3 29 1 30 0.80 2 2 0.23 78 3.5 0.0 27 44 79 97 77 98 0.92
Sequence Information
- Coding Sequence
- ATGAAAGTGCGGCAGGCTTCAAGACTGTACAACGTGCCCAGAAGCACCCTAATGGGAGTCATCAAATCTGGGTGTATTTCTGCTAAACGAGGCCCTCCtcctattttcaataaaaatgatGAAGAATACCTAGTCAATTACGTCTTAGAGAAACAATCTTTGAATATTAAATCTTTACTAAGCAAAGCCAAATATGTAGCAGAGAAATCGAACTTGactcattgttttaaaaatggcATTCCGGGGATGACGTGGTACTATAATTTTCTTAGAAGACATCCGGAGTTGAAGAAGTATTCCGCTACTAAAAGTAGACGTAATGGAAACCATGAAAACAATTAG
- Protein Sequence
- MKVRQASRLYNVPRSTLMGVIKSGCISAKRGPPPIFNKNDEEYLVNYVLEKQSLNIKSLLSKAKYVAEKSNLTHCFKNGIPGMTWYYNFLRRHPELKKYSATKSRRNGNHENN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -