Abis014234.1
Basic Information
- Insect
- Apomyelois bistriatella
- Gene Symbol
- -
- Assembly
- GCA_947044225.1
- Location
- CAMRHB010000069.1:4276135-4278884[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-09 6.4e-07 29.4 0.1 1 39 8 45 8 49 0.91 2 2 2.2 7.7e+02 0.3 0.0 25 37 569 581 568 584 0.86
Sequence Information
- Coding Sequence
- ATGGCGCCTAAGAAAAATTATACGCCTGAGCAGATGGCCAGTGCTGTTGCAGCTGTGCACGAAGGCGCATCTATAAGCTCAGCGGCGAGGAGCTTTAATGTACCGAGGATTACGctgcataataaaataagtggAAAAAGTCCATTAATCTGCAGAATGGGACCTGATacgattttatcaaaaaataaagaactcTTTTTAGGTAAGTGGGTGATCGCCATGGGCGAAAGGAGGCTACCAGTCACAAAGGATCAACTCCTAGATAGCGTTCAGCGCATTATTACTGCGGATAAAAGATCTACACCGTTCACAGGGAATCGACCAGGTAAAAAGTGGTATTCTGCGTTCCTTACAAGGCACCCTATCCTCGCAGAGCGGGTGGCTGAAAATATTAGTGCAGCAAGAGTCGCCGTGAGTGAGGAACAAATCAGAGGCTGGTTTACGGAAGTAAAAGATTACTTGACTCAAAACAACTTATCTGAAATGCTCAACGACCCAACCAAAATATTCAATACGGACGAGAGTGCCTTCTTTCTGTCCCCGAAACATGGAAAAGTCCTCATCAAAAGAGGTACTAAAAACGTTTATTTGACAAATGGAGATGAGAAGGAAAATTTGACTGTTTTGGTGACGGCGAATGCCCCCGGTAAACTAGCGCCGCCGATGATAGTTTATGCCTACAACCGCATTCCGGCCAACATTGCCAAAAACGTACCTCAAACATTGGAAAGTCTGAATCAGGCTGGATGTGCGCCCATGGATATAGCAGTGTTTAGGCCACTCAAACTATACAAAAAGGCTGTAGAAGATTGGAAGATGCAAAACAACGGTGATAGACTTAAAAAGGAAGACTTCGCGCCAGTATTAAAAAAAGCATTGGAGAGTATAACAGTCGATTGCATTAAAAATGGATTTCGAGGTGGCGGGCCATATCCATTCGGACCTGAGTACATTGATTACTCTAAAATGAGGTCCCAGAATGAGCCAAAACAAAGTACAATCCAAGATCAGCAACAATTTTTAAACTACCTGGaaagtcaaataataaaaacatttggcCAAGACAAACTAGCTATGTATAATAAACTATATTTGGAGGGCAGAAATGTGCTTGAGAATATGGTGCTGGAAGAAGACATGAATCTTTATATTATATGGGcgtataataaacaaacaacagCAGTACTCGTCGATAACAGTGCAGACTCGATTGCTTTACGATCCCAAGAAATTGCATTTTCCAACAATGCTGACCCATCCATCTCTCGGCCCGAAACCTCTGTACTCTGTACAATGCCTTCAGCCGATACAAAACAATCGCAGTGTCAGCCAGAGCCCACTGGATCGACTGTACTTGTTGATGCTACTAGCCCATCCATTTTGCAACCCGAATCCATTGCGCCTGTTGATTCTGATTCTCGTTTGGAATCCGCAATGCTCACGGTAGCTGTTAATGATGCAATGTCATCTAGCTTTCGACCAAAACTCACTACATCCACAGTTACTTGTAGTGATGTAAGCACATCTAACTCTCGCCAGGAAACCTCAATGCCCGAAGTAGCTTCTGCCAATACCAGCCCTCCCAGCTCTCAAATAGAATCCACCGTCGAGACTATGCATATACTGCCTTCTAAAGGAGTATTTGTCATTGTGAAGTACGAAGGTGAGTATTTTCCAGGAAAAATTGAAAATACGGATATAGAACGATACGAAATTAGTACTATGACATTATCCTCAAGAAACAGTTTCAGATGGCCTGAGAGAGTACATAAAATTTGGTACCCAATCAGTGATATAGTTGAAATAATTGATACCCCTGTTCAACACAATAATAGAGGCTTTTTCAAAGTTAAAGAAATGCTAAAATATTTGCctgatatttacatataa
- Protein Sequence
- MAPKKNYTPEQMASAVAAVHEGASISSAARSFNVPRITLHNKISGKSPLICRMGPDTILSKNKELFLGKWVIAMGERRLPVTKDQLLDSVQRIITADKRSTPFTGNRPGKKWYSAFLTRHPILAERVAENISAARVAVSEEQIRGWFTEVKDYLTQNNLSEMLNDPTKIFNTDESAFFLSPKHGKVLIKRGTKNVYLTNGDEKENLTVLVTANAPGKLAPPMIVYAYNRIPANIAKNVPQTLESLNQAGCAPMDIAVFRPLKLYKKAVEDWKMQNNGDRLKKEDFAPVLKKALESITVDCIKNGFRGGGPYPFGPEYIDYSKMRSQNEPKQSTIQDQQQFLNYLESQIIKTFGQDKLAMYNKLYLEGRNVLENMVLEEDMNLYIIWAYNKQTTAVLVDNSADSIALRSQEIAFSNNADPSISRPETSVLCTMPSADTKQSQCQPEPTGSTVLVDATSPSILQPESIAPVDSDSRLESAMLTVAVNDAMSSSFRPKLTTSTVTCSDVSTSNSRQETSMPEVASANTSPPSSQIESTVETMHILPSKGVFVIVKYEGEYFPGKIENTDIERYEISTMTLSSRNSFRWPERVHKIWYPISDIVEIIDTPVQHNNRGFFKVKEMLKYLPDIYI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -