Abis004744.1
Basic Information
- Insect
- Apomyelois bistriatella
- Gene Symbol
- -
- Assembly
- GCA_947044225.1
- Location
- CAMRHB010000015.1:943627-946154[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-10 3.7e-08 33.4 0.0 2 40 16 55 15 59 0.87
Sequence Information
- Coding Sequence
- ATGCCGAGACACTACGTTAGAAAAACCACTAGAGCTGCTTACTCTAAAGAAGACTTAAAAACAGCCATTGAAAAAGTTAGGAACAATGAACTGTCCAACTATGAAGCTTCACAAATATATGGAATTCCTAAATCGACACTTAATGACAGAGTCAATAATAAAACAGGTCATATAAGTGAAACCTTGGGACGACCACCAGCAATTCCTCTAGAACTGGAATTAGAGCTTGCATCTCATCTGCGTACTCTGGAAAAATGGGGGTGGGGGTTGTCGCGAGAAGAAGTGCTTGAGATAGTTggggaatttattaaaaacaataatttgaaaACACCATTCACTGATGGGAAACCTGGGGCTGATTGGTTCATTTCTTTTAAGAAGCGTCACAATTTATCTATAAAGAAGCCACAACCAGTTGAATATCTGCGCAAAAGAATGACTGATCCCTTTGTAGTAtatgattatttcaaaaaattggaAGAATTATTAAAAGAGCTGAATCTCGAATTATCGCCAGATAGAATATGGAATCTAGACGAGACATCTATGTGTCTAGATCCTACTAAAACTAAAGTAGTTGGTGCAGTAGGCAAACCATGTACCAGAACTACTGCTGGTACCGCCAAAGAAAACATTACTGTGTTAACTACTGTCAACGCAGCTGGCAAGAAATTGACACCTTTGATCGTTTTTAAAGGAAAGCACGTATATGACGAATGGATggtaaaaaaaaaggaggagtttgattttgacatttcttATGCCGCAAGCAAACGTGGTTGGATGGAGACCGAAATCTTTTTCAATTATATGTCAAAAATCGTTATTCCAAGTTTGGGGTCAGAACGAcccgttttaattatttatgatgGCCACAGCACTCATGTGGACAATAAAGTTGTATCATTAGCCATAGACAACAATGTGACTATACTGAAATTACCAGCACATACATCGCACTTACTTCAGCCgttagatttggcggtatttaagtctttaaaatCCAACTGGGATAAAAATCTTGTCAAATATCAACGACAAAATGTTGGCGTTAAATTACGCAAAAATGCTTTTGCTGAAATGTTTGCTGACGCCTGGAATCAAACCAGTCCGAAAATTATACAAAGTGGCTTCAAAAAAGGAGGCATTTATCCTTTCAATTCAGGTGTAATCACAGAGGAAAAATTTGATCCAGCCGCATTAAAGAGGTGGAAAATGCACGAAGCCCAAAAAGAATTAAAGCCACTAAAGTCACTTCAACAGCTATGTTTAGACATTGTAAATAATGTTAAGTTTTCACCAATAGGTTCTCGTACAATGCAGAGTTCTACTAACTGTGACACTAAACATCTTGAAGTATCGGAACTAAAATGTACGTTTGAGGAATTACTTTTACAGAAGCTTAAATATCATCCCCAAACGACTGGCAAAGTTACACGGAAACGTGTTGCATCCGGAGCCGAAGTTATCACCcgcaaaattttagaaaacaaaaataaggaAACATCGCAACAGCCGAAATCAAAGATAACCAAAATCAAACCAAAACCAATAAACTATATAAGTGAAGTTACAGGTGATCTTGAAAGATGTGATTCTGAGGAGGAAAGTCTGACTATTTTGGACGAAAAAACAGGACTAATCCAAACGCTAGTATTTACTGATGCTGTGATAGAAAAACaagtagaaaataaagaaaatgttttaagaagtgaaaacaatttaaaaaagaaaaaatcagtacctaagaaaaagaaaaggctGCGAAGTAGTTCAACAACGACGGATGAAGACATTATGAGCATCCACACTGATAGTGACATATGTGACATTGTATCGGTTGAagatgaagatgaagaagatgaagatGTAATCAGAAAATTAATTGATGAAAAGGAAGCTGCTATTTTTGCACAAATTTCTGAAATAGATAAACTTGAAAATCAAACACTTGAGTATGACGAAAAACCAAAGATTATAACTGTAAAAGATtcaagaaaagaagaaaagcCAATATTGTATCAGCAAACTAATAACTGTAATGCATCGCAGGAAAAgaatgaaaaatatgaaattgagGAAAAACCTTTAACATCGATTAAAGCAGATAATGAGTCTCCAACTTACCACATTGGAGATAATATATTAGCTCGGtattatgaaaagaaaaactGGAAACATTATGCAGGAACGATAACCGAAATTATTTATAAGGACCGACTTCAATTTGAATACAAAATTACGTTCTACAAAACTATAcggaaaaataatacattaaaatttgtcGAACCAAAGAGGTCTGATATAGACTGTATACCAGGCGATCTTATTGTAAAAGAATTAAAACTGATTCAATTTAAGGTAAATCCTAGTGAATTCGTCTTATATGATGATAGTGATGACGTGTATTTTCTGTAA
- Protein Sequence
- MPRHYVRKTTRAAYSKEDLKTAIEKVRNNELSNYEASQIYGIPKSTLNDRVNNKTGHISETLGRPPAIPLELELELASHLRTLEKWGWGLSREEVLEIVGEFIKNNNLKTPFTDGKPGADWFISFKKRHNLSIKKPQPVEYLRKRMTDPFVVYDYFKKLEELLKELNLELSPDRIWNLDETSMCLDPTKTKVVGAVGKPCTRTTAGTAKENITVLTTVNAAGKKLTPLIVFKGKHVYDEWMVKKKEEFDFDISYAASKRGWMETEIFFNYMSKIVIPSLGSERPVLIIYDGHSTHVDNKVVSLAIDNNVTILKLPAHTSHLLQPLDLAVFKSLKSNWDKNLVKYQRQNVGVKLRKNAFAEMFADAWNQTSPKIIQSGFKKGGIYPFNSGVITEEKFDPAALKRWKMHEAQKELKPLKSLQQLCLDIVNNVKFSPIGSRTMQSSTNCDTKHLEVSELKCTFEELLLQKLKYHPQTTGKVTRKRVASGAEVITRKILENKNKETSQQPKSKITKIKPKPINYISEVTGDLERCDSEEESLTILDEKTGLIQTLVFTDAVIEKQVENKENVLRSENNLKKKKSVPKKKKRLRSSSTTTDEDIMSIHTDSDICDIVSVEDEDEEDEDVIRKLIDEKEAAIFAQISEIDKLENQTLEYDEKPKIITVKDSRKEEKPILYQQTNNCNASQEKNEKYEIEEKPLTSIKADNESPTYHIGDNILARYYEKKNWKHYAGTITEIIYKDRLQFEYKITFYKTIRKNNTLKFVEPKRSDIDCIPGDLIVKELKLIQFKVNPSEFVLYDDSDDVYFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00146320; iTF_00146321; iTF_00146322; iTF_00146323; iTF_00146324;
- 90% Identity
- iTF_00146320; iTF_00146321; iTF_00146322; iTF_00146323; iTF_00146324;
- 80% Identity
- -