Basic Information

Gene Symbol
-
Assembly
GCA_947044225.1
Location
CAMRHB010000042.1:1360567-1373517[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.3e-10 1.9e-06 28.6 0.0 4 62 610 666 607 688 0.82
2 2 0.018 55 4.7 0.1 74 89 819 834 799 834 0.82

Sequence Information

Coding Sequence
atggatattggcATAGTCAAAGTGCGTGCATGCAGCGTCCTAAAGATAGATAAACATGAGGTGCTCGCCATCAACGACAAGGTGGTGGTTCGAGCGGAGGACCTCCTCAGCTGGGTGTGCGACGGCGGCTCGTGGAGCTGGGGGCTGAAGGCCGTATGGAGGGGAGCCTGCGCCCCCCCCGCCGAGCCCAAGCACTCGGCGCCGCTGCACCACACCAAGATGGATTTTAGTGATATTGAACGGGAGAAAAGTGCCATTGCAATAGACGCGGATTCACCAGGAGTGGTGGTGTTCTCATACCCCCGGTACTGTCGGTACCGGGCCCTGATGTCCAGGCTGGAGGGGCTCCAAGCCGATTGGCTCAGGGACTCCCTGGTCGCCGCTTTGGGGGGTTACGCTGCCCCTACTAAGAACACTAGGATTTTGTATTGTAAGGACACATTCGAGTACCCCGAGTTGGAGGGGCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGCAGACCGcgcggccgccgccgccgccggccctCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGTGAGTGCGGCAGACATTGACAGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGTGAGTGCGGCAGACATTGACAGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGTGAGTGCGGCAGACATTGACAGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGTGAGTGCGGCAGACATTGACAGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGCAGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGTGAGTGCGGCAGACATTGACAGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGTGAGTGCGGCAGACATTGACAGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGGCTGCTGCCAGCGCTCGCACGGCCAGGACTCGCCGTCCCGCTCCAGCGACAGCGAGCCCGACAGACCGCCGCCGCTGCCCAGGATCCAAACACCTCGTCGCCTTTCTCTTCGCAACGGTGACAAAGCGAGCGAGGAAGAAGACGAGCGACGTGAAGACGGAGAAGACGGGGAGTTCCTCACGCAGCTGCGCCAGTTCTACCGCGACAGGAACCAGCAGCTGAGGCTCGGGAGCACGCTGAAAGACTTATCCCTCCGCGCGGTGTACTCGGCGGTTCGTTCACGCGGCGGCTACGAAGCGGTGTGTCGCCTCAAGCTGTGGCGGACGCTGTTTGCAGAGCAACCGGCGAGGACACGCAGACACTACGAGCGAGCAACCGGCGAGGACACGCAGACACTACGAGCGGTGAGATACATATTGTCAGCAGCTGGAGGTTCCGCCTCAAGCTGTGGCGGACGCTGTTTGCAGAGCAACCGGCGAGGACACGCAGACACTACGAGCGGTGAGATACATATTGTCAGCAGCTGGAGGTTCCGCCTCAAGCTGTGGCGGACGCTGTTTGCAGAGCAACCGGCGAGGACACGCAGACACTACGAGCGAGCAACCGGCGAGGACACGCAGACACTACGAGCGGTGAGATACATATTGTCAGCAGCTGGAGGTTCCGCCTCAAGCTGTGGCGGACGCTGTTTGCAGAGCAACCGGCGAGGACACGCAGACACTACGAGCGGTGAGATACATATTGTCAGCAGCTGGAGGTTCCGCCTCAAGCTGTGGCGGACGCTGTTTGCAGAGCAACCGGCGAGGACACGCAGACACTACGAGCGGTATCTCTTATCCTACGAGGTTCACGAACGCAAGCACTCTAAACTAAACGGAAGAGTGGATATGTCACGTCCGGTAGCCACAATTGACGTCACATCCTCCCCGCCCACCCATCACCGGCTAAGGACGCCGTCGCCGGTGCTTAACCTAAACAATGACGCGGAGGTCAATAATGAGATGACAGTCGTTGATAAACCTGCTGAGGAGTTAAATAGGGAATTCCTCGAGTCACTACCAAAGGACGAGAAGGCGGTGAAAATATCCGTGAAGCCCGTAGAGAAACTGTTGGACAATGGCGGGCGAAAACTGTTCGACGCGGGAAATGACGATGGTCAGAAAAAAGACGGTTTCGTGAGCGAGCTGGAGAAAAAGCTCAATACACCCGAGAATGAGGGTCAGCCGCAGCCGGCCGCGGGCAGCCTGAGCCGGCTGGCGTCGCTCGGGGACAAGTACGTCAACGGACACCACGCACCGCCGCCCGAACAGCCGTCGCGGCCGGCGCGGCCGGCGGGGCGCTCGTCGCTGCGGCACGTGCGCGTGAAGCCCGCGCGGCCCAGCGTCGCCGCCACCACGCCGCCGGCGGCCGCGTCTAGCTCGCCGAGCCCCGCCGTCACCAACTTCGGCATCCACCACCCGCCCGCCGCCGCGCACAGCGACGACGAAATCGTCGAGGTGCCATACAAACCAAAAACGCCAGAGATAATAGACCTCGATGAGTACCCGGAGAGTCCTCAAGGCCTCAAGAAGAAAAAGCTGGACATCCTCAAAGAGAGGGGGCTCGAGGTGACCGCCATCCCCAACCCCCCCTCCTGGCCAACCCCCGTCCCCCTCACCCCCCTCCTCAACACCAACCCCATGCTCCTCAACCCCGCGATGCAACACCAAATAATGACACAAGCGCAGCTATTCCAAATGTATAACATAGTCCCTCCTAATTTCGCCAACGGGCTTCAACCCCCCAGAGTGATCCAAGCCACTTCAATCTTCGGCTCGGCCGGCCCCGAGAAGACTGTCTACGGCAACCCCAAAGACCCCTTCATGCCTCCACCACATATACTACACGGCGCTCCGTTAAAACCACAGAAAAATGTACCATCTTCTGAGCATCAACAGACGCCGACACGGCaagatattttagatctaacgTGTAGTAAAAAATCGCCATCGCCGTCACAAAAACCCGCTGTTGAAATAGTTAGGATACCAACGACCCCATCGCCCTCAAAAGTGTCTAGTTCAGTCCAAAATTTGCCCAAAAACTATACCGTTATTGACGGCAAAGCGGTCGTCGGATCGAACTTAGAAATCACTTTAGTCAACCCCAAAGTCCAAACGCCATCTAAAAACAAAATTCCTCAGAAAAGATCGTCGAACGGCAAATTCGTTTCGACAAAAACGCCTCCCAAAGAATACAAGCCTTACGCTTGTCCGTCCCCTTCAGGGGTCCAAAAAAAGCCACCAATAACTGTACCTAATTACCAGGTGAATAGAGACGATGTTTCTCCAACGAACTCGTCTAGTTCAAGAGACAGTCAGCAGAGTCAGAATAATTTGATAAACGTTTTCAAAAGTCAAAACAGCTTAGCTCAATTTATAGAAATGCAGAAAAATGCCGTTCCCAATATTAGCCCGTTCATGGATCCCGTGTATATGAGCGCTTTGTACAGCTCCCTGGGACAGATGGATCAAAGACAACTGGCTGCGTATAGAGACTTGGCGAACCAATTTAGGGGTTATTCGGGTATTTTCAATATGGGGGCGGTAGGTAGCACTCCAACaacgaaaaattaa
Protein Sequence
MDIGIVKVRACSVLKIDKHEVLAINDKVVVRAEDLLSWVCDGGSWSWGLKAVWRGACAPPAEPKHSAPLHHTKMDFSDIEREKSAIAIDADSPGVVVFSYPRYCRYRALMSRLEGLQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRRPSHGQDSPSRSSDSEPDRPPPLPRVSAADIDRLLPALARPGLAVPLQRQRARQTAAAAQGCCQRSHGQDSPSRSSDSEPDRPPPLPRVSAADIDRLLPALARPGLAVPLQRQRARQTAAAAQGCCQRSHGQDSPSRSSDSEPDRPPPLPRVSAADIDRLLPALARPGLAVPLQRQRARQTAAAAQGCCQRSHGQDSPSRSSDSEPDRPPPLPRVSAADIDRLLPALARPGLAVPLQRQRARQTAAAAQGSCQRSHGQDSPSRSSDSEPDRPPPLPRVSAADIDRLLPALARPGLAVPLQRQRARQTAAAAQGCCQRSHGQDSPSRSSDSEPDRPPPLPRVSAADIDRLLPALARPGLAVPLQRQRARQTAAAAQGCCQRSHGQDSPSRSSDSEPDRPPPLPRIQTPRRLSLRNGDKASEEEDERREDGEDGEFLTQLRQFYRDRNQQLRLGSTLKDLSLRAVYSAVRSRGGYEAVCRLKLWRTLFAEQPARTRRHYERATGEDTQTLRAVRYILSAAGGSASSCGGRCLQSNRRGHADTTSGEIHIVSSWRFRLKLWRTLFAEQPARTRRHYERATGEDTQTLRAVRYILSAAGGSASSCGGRCLQSNRRGHADTTSGEIHIVSSWRFRLKLWRTLFAEQPARTRRHYERYLLSYEVHERKHSKLNGRVDMSRPVATIDVTSSPPTHHRLRTPSPVLNLNNDAEVNNEMTVVDKPAEELNREFLESLPKDEKAVKISVKPVEKLLDNGGRKLFDAGNDDGQKKDGFVSELEKKLNTPENEGQPQPAAGSLSRLASLGDKYVNGHHAPPPEQPSRPARPAGRSSLRHVRVKPARPSVAATTPPAAASSSPSPAVTNFGIHHPPAAAHSDDEIVEVPYKPKTPEIIDLDEYPESPQGLKKKKLDILKERGLEVTAIPNPPSWPTPVPLTPLLNTNPMLLNPAMQHQIMTQAQLFQMYNIVPPNFANGLQPPRVIQATSIFGSAGPEKTVYGNPKDPFMPPPHILHGAPLKPQKNVPSSEHQQTPTRQDILDLTCSKKSPSPSQKPAVEIVRIPTTPSPSKVSSSVQNLPKNYTVIDGKAVVGSNLEITLVNPKVQTPSKNKIPQKRSSNGKFVSTKTPPKEYKPYACPSPSGVQKKPPITVPNYQVNRDDVSPTNSSSSRDSQQSQNNLINVFKSQNSLAQFIEMQKNAVPNISPFMDPVYMSALYSSLGQMDQRQLAAYRDLANQFRGYSGIFNMGAVGSTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-