Basic Information

Gene Symbol
osa
Assembly
GCA_947044225.1
Location
CAMRHB010000069.1:3116287-3144210[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-26 6.1e-23 81.4 0.0 2 89 289 373 288 373 0.94

Sequence Information

Coding Sequence
ATGTCCGCGCTCGAACTTATTCAAAACGATCTGACCGGTCAGAACAGCAATGACTCGGGCGGGAGCGGCGGCGCGGGTCGCGCTACCACGCCGCACCTGAGGCCGACGCCCAGCCCCACCGGCTCCAGCGGATCGCGATCCATGTCACCGGCTGTCGGCACGCAAAACGTAGCGATGCCGCCGCGAACGTCGTCGTCGCTGTCGGATGGCAGCGGGGGCGCGCCGCGGGGCGCAGGCGCGGCCCCGGGCCCCGCGGGCCCCGGCGGGCCCGTGCCCCCGCCCGGCGCGGCCGCCATGGTCCCGCAGCCCTACCACCACGGCGCGTACAAGCCGCCGCACTACCCGCCTCAGCCGTACGGCTACCCGCCGCGGAATCACCATCCGTATCAGCAGTACAGCCAGTATAGACCGCCGCCGCCTCATCCGCCTCAACACTATCCACCCATGAAGGGCGGGCGGCACATGGGTCCGCCGGGCCCGGAGGGCGCCATGCCGCCGCCCACGGCGCCCGGCGACGCACACGACAACGggcccgccgcgcccgccacCGCGCTCGTCACCACCGGGCCTGACGGCGCGCCGCTGGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCGTCCGCCGCGTCGGGCGAGGAGGCGTGCAGCGCGAAGGGCCGCAAGGAGTTCCCGGGCAGCGCCGCGCCGTCGCCGTCGCCGGGCGCCGCCTCGCACTCCTCCGCGCACGACGACTACGACGCGCCCGCCTGGACGCGCCCGCCGCCCAGCCCGGTTTTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGGCTGCTGGCCTTCATGGAGGAGCGGCGCACGCCCATCGCGGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTGTACCGCCTGTACCTGCTGGTGCGCGAGCGCGGCGGGTTCGTGGAGGtcacaaaaaacaaaacgtGGAAAGACATCGCCGGCCTTCTCGGCATCGGCGCGTCTTCGTCCGCCGCGTACACGCTCCGGAAGCATTACACGAAGAACTTGCTCGCGTACGAGTGTCACTTCGACCGCGGCGGCATCGACCCGCAACCCATCATCAACCAGGTCGAAGCATCCACTAAGAAGAAGAGTGGGAAGAATAATAGTAATTCCAATGCAGGGTCGTCGAACTCGTCAGAGTCGttcggcgcgggcgcgggcgcgggcgcgggcgcgggcggcggcgcgcccaTGGACGGCTACGCGCCGCAGTACCAGGGGTACCCGCCGCAACCCAACCAGCAGCCAGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCCAACCCGTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTACCAGCAAGGATACGGGTATGAATACGGACCTCCTTATCAGCCAAATAGGCCTGTTTATCCACCTTATGGACCCGACGGGGATAGGGGTTACCGGGGCGGCGGCGAGTACCAGTACGGCGGGTACGGCGGCGGCTACCGTGCGGCGGGCCCGGGCGGCGCGCCCGCCCCCGCGCCGCCCGGcacgccgccgcccgcgcagcCCTACCCCGACTACTACCGCGCGCCGCACCCGCACCCGCCGCACCCGCAACACCCGCCGCACCCGCCACACCCGCCGCACCCGCCGCACCCGCCACACCCGCCGCTGTCGCCGCACCAGCCGCATCAGCCGCCGCACGAGATGTCGTCGAGCGGGCAGCAGGCCGGTCTAATGAGCTCGCAGCTCGCGCGGCAGCTGGTGGCGCCCCCCAACCAGCGACCCTACGTACGGAGCCCTGTTTGTACCACGCACTCAACACCGCTTCCCATTGATTGGCAAAGAGGTCACACTCACACGCACGCCGGCACACATACATATGCCGCGCGATTCTCGTCTGCTACGTGA
Protein Sequence
MSALELIQNDLTGQNSNDSGGSGGAGRATTPHLRPTPSPTGSSGSRSMSPAVGTQNVAMPPRTSSSLSDGSGGAPRGAGAAPGPAGPGGPVPPPGAAAMVPQPYHHGAYKPPHYPPQPYGYPPRNHHPYQQYSQYRPPPPHPPQHYPPMKGGRHMGPPGPEGAMPPPTAPGDAHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEACSAKGRKEFPGSAAPSPSPGAASHSSAHDDYDAPAWTRPPPSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKNNSNSNAGSSNSSESFGAGAGAGAGAGGGAPMDGYAPQYQGYPPQPNQQPGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGPPYQPNRPVYPPYGPDGDRGYRGGGEYQYGGYGGGYRAAGPGGAPAPAPPGTPPPAQPYPDYYRAPHPHPPHPQHPPHPPHPPHPPHPPHPPLSPHQPHQPPHEMSSSGQQAGLMSSQLARQLVAPPNQRPYVRSPVCTTHSTPLPIDWQRGHTHTHAGTHTYAARFSSAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00012714;
90% Identity
iTF_00072500;
80% Identity
-