Basic Information

Gene Symbol
xbp-1
Assembly
GCA_947044225.1
Location
CAMRHB010000055.1:4114377-4116265[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.8e-17 2.5e-14 53.4 12.5 2 63 44 105 44 107 0.94
2 3 0.00042 0.38 11.2 0.5 33 55 89 111 88 116 0.91
3 3 3.3 3e+03 -1.3 0.0 20 48 137 166 131 183 0.70

Sequence Information

Coding Sequence
ATGAGCGCCCCTATCATCATTACCGTGCCTAACAACTACCTGGCGGTGGAAGAGATGGACTCCAACGTCCTCGTGGACGTCTCACCTTCTCCACCGTCCAGGAAACGGCGCCTGGACCATCTGACATGGGAGGAGAAGATGCAAAGAAaGAAACTTAAAAACAGAGTGGCAGCACAAACATCGCGCGACAGGAAAAAGGCTAAAATGGACGAAATGGAACATCGTTTGAAACAGTTTATGGATATGAATGAAAGGTTGGCGAGCGAAGTGGCGAGTTTGAAGGCGCTGAACGAGCGTCTATTGAGCGAGAACGCAGCGCTTCGCAGCGAGTCGGCGGCGCGCAGCGTCTCGGGGGCCCAAGGACCGGCAGAGTCTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGATGCGCGCGGCGCGGCTGCTGCTGGCGATGTGCCTGCTCTCACAGACATCCTCGCTCACCTCGACTCAGAAGAGTACCTTGACAGCCTCCATCAACTTGCAGACTCCTTACTACAAGAAATTAGCGCAAGTGCTTCAGGAGCGGTTGAAAATgtCTCAGTCAGGGAACCTGAAAAGTGTACTGAAGGAAATAAAGTGGATACTGTCCCAGCACTCGTATGCGCATCCCTACACACCCGACATCGTAGTCTCAGCACCTAAAGAGACAGTACAAATAAAGGAGGAGAGTGGAAATGACAAAGGAGACATTTTCTATGCTGATTTCGATGAAGATAATGACTGTGTCACTGTCGAAGTCCCATGTGAGGAGCAGGTCATTGAAGAAGTTGCCCCTGTGAAAGTTGACGCTCCTATTAAAATTGAGACAGATTTCTTGAATACGGACTTTGATCTGAAAATGGTATCTCCTATGACTTTGTCACCGAATTCCATTGATGACAACTTGCTGCTGTCACCGTCGCACACAAGCCTTTGTTCGGATCTCGGTTATGAGTCATTATCATCTCCCCTCAGTGAACATGATGCTATGGACTTGTCAGACTTCTGGTGTGAATCGTTTTCAGAACTTTTCCCTGATCTAGTTTAG
Protein Sequence
MSAPIIITVPNNYLAVEEMDSNVLVDVSPSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHRLKQFMDMNERLASEVASLKALNERLLSENAALRSESAARSVSGAQGPAESPQQKEGPPTAMRAARLLLAMCLLSQTSSLTSTQKSTLTASINLQTPYYKKLAQVLQERLKMSQSGNLKSVLKEIKWILSQHSYAHPYTPDIVVSAPKETVQIKEESGNDKGDIFYADFDEDNDCVTVEVPCEEQVIEEVAPVKVDAPIKIETDFLNTDFDLKMVSPMTLSPNSIDDNLLLSPSHTSLCSDLGYESLSSPLSEHDAMDLSDFWCESFSELFPDLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01220394;
90% Identity
iTF_01220394;
80% Identity
-