Basic Information

Insect: Apolygus lucorum
Gene Symbol: -
Assembly: GCA_009739505.2
Location: CM019168.2:38069999-38093604[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.84 69 4.3 1.5 3 21 476 494 474 494 0.89

2 15 0.84 70 4.3 0.2 1 21 553 573 553 577 0.89

3 15 2.3 1.9e+02 3.0 0.2 1 23 630 654 630 654 0.93

4 15 2.8e-05 0.0023 18.4 0.4 2 23 748 770 748 770 0.95

5 15 0.009 0.74 10.5 7.1 1 23 805 827 805 827 0.98

6 15 0.016 1.4 9.7 5.9 2 23 840 861 839 861 0.97

7 15 0.12 9.7 7.0 2.1 3 20 872 889 870 891 0.93

8 15 0.036 3 8.6 0.5 1 23 904 927 904 927 0.94

9 15 0.018 1.5 9.6 4.0 2 21 975 994 974 997 0.87

10 15 0.0097 0.81 10.4 1.1 2 21 1042 1061 1041 1062 0.94

11 15 0.31 26 5.7 3.4 1 19 1132 1150 1132 1150 0.96

12 15 0.00048 0.04 14.5 5.0 1 22 1161 1182 1161 1185 0.90

13 15 0.0032 0.27 11.9 0.8 1 20 1242 1261 1242 1264 0.94

14 15 7.5 6.2e+02 1.3 2.3 3 23 1355 1375 1354 1375 0.94

15 15 0.016 1.3 9.7 2.2 2 23 1443 1464 1442 1464 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.84	69	4.3	1.5	3	21	476	494	474	494	0.89
2	15	0.84	70	4.3	0.2	1	21	553	573	553	577	0.89
3	15	2.3	1.9e+02	3.0	0.2	1	23	630	654	630	654	0.93
4	15	2.8e-05	0.0023	18.4	0.4	2	23	748	770	748	770	0.95
5	15	0.009	0.74	10.5	7.1	1	23	805	827	805	827	0.98
6	15	0.016	1.4	9.7	5.9	2	23	840	861	839	861	0.97
7	15	0.12	9.7	7.0	2.1	3	20	872	889	870	891	0.93
8	15	0.036	3	8.6	0.5	1	23	904	927	904	927	0.94
9	15	0.018	1.5	9.6	4.0	2	21	975	994	974	997	0.87
10	15	0.0097	0.81	10.4	1.1	2	21	1042	1061	1041	1062	0.94
11	15	0.31	26	5.7	3.4	1	19	1132	1150	1132	1150	0.96
12	15	0.00048	0.04	14.5	5.0	1	22	1161	1182	1161	1185	0.90
13	15	0.0032	0.27	11.9	0.8	1	20	1242	1261	1242	1264	0.94
14	15	7.5	6.2e+02	1.3	2.3	3	23	1355	1375	1354	1375	0.94
15	15	0.016	1.3	9.7	2.2	2	23	1443	1464	1442	1464	0.96

Sequence Information

Coding Sequence: ATGACTGAAACgctggaaaatttggaagtgtTGTGCAGATTGTGCCTCAGCATTGAAGGCAGAGTCCCGATTTTCCCAGAGGGCGAAAATGAGGACGACCTCTCGACGAGGATTTTCGAATGCGTATCCATTCAGGTGGAACGAAATGGCAAACTTCCACTGAACGTTTGCTCTTCCTGCGTGTCTTGTATTGAATCTTGGtacgttttcaagaaaaaatgccATGTAACACAGGACGCTCTAACGTCGATGGTTGGCGAACTGCAAAACCAATCAAGGAAACAAGATGATGTCGCTCTGTGCAACGGAGACTCTCAGTCCTCCATCCAAGATTCTGCTGGTCCAGAGGAAGTATGTCGAGGCCTTGATGTAGCTAAAATTGTTGGTACCAACAATGAAGCAGCACAGGATGTGGAAGCGTCCGGCCAGGATGAAAATGAGCCTCTTGGAGATACACCCAGAATCCAGGACGAAAAGGCAGATGCAAGTCAACCTGAACATGAAAATGATCGAGTGATCACTCAGACTGGTATTCCGGAACATGTAGAAGCAGAAACTGAAAAACCAGCGTCGTCGGTGGTGGAAGGTAAAGAAGACTCTTCCCATGTTGAGCAGTCCAATGGTATGCCGGCGATGGAGTCGGACGATGACTCCAGAGAGGAAATGAtggaagaagacgaagaagaagagTACGACGATTTCGTCGACGAAGAGGAATTCAACGAGCCTCCCACAGGTCAACTCGTGAACCCGAAGTTCGCCGCTAAATTGAACGCCAATCCGGATTCTTCCAGCCCGTCCGGCACCGTGCAGACGGTCGATCTGTGCGAAGAAGACGACGACGTTTGCGTCGTTGAGCCGGAAatacaaaaaatcaatttggacGAAGACAACGAATCGGATTCGGACAAACCGGGAGGATCGAAACCGGATcaggggaacagtgacatcacgCTGAAGATCGAGTCTGCTGTCACTCTTCCGGATGATCTGATGGAAAAAGATCAACCGCCAGAACCTAAAAACGCTGATGAAGCTGCCTTGCCTGGTGAGGCCGAAAACGAGCAGAATGTAACAGCCAGGTCTTCCAAAGAAAATTCGCCTGACCGAATGAGTGCCAATGGCTCAGTGATGGAGGATGACCAGTTCGAGGACGACGAATCATCTCAGCAGGTTCCTCCTTCTGTCGGCGAAAACAGCAGAGCTACACCGGACTCCACCATGGTCAGCAGTAACACTGAGGAACCTGAACCTTATATTCCGtTGGCTTTCGACGACATCAAGCAAGAAGTGGACAGAGGCTACGCTGATGAAGGCTCAAGTCAGGGCTACAATCCTGTAAGGAACGTCCAAGGTAAAACTCGAGACGAGTACGAGAGAGAACTGTTGTCGGGAGATACGACGGTGGACGTCAATAACGATCGTTGTATTATTTGCGACCACAAATTTCACAGCATCAGTTCTCTGTTGAGACACACCAAGTGCAAAACTCACATTATCAATAAGCAGCTCATATTGAAGAGGGAGATGGGTGCTCCGATCGATCCGAAGATGCAGGCTCTGCACGACCGCCATATGCTGGCATACAGGAACCAGTGGAATAGCGGTAAAAGGAGAAATTACGCATCTCCAGGAATCGGTAGTGGTCCTAAACGGTTCGCTTGTAAGCTTTGTAGAGTCGTTGCTATATCAGCTAGGGACTTGGAGCGCCACAAAGCCAGCAAGAAGCATAAATTATGCGTCATGATGGGAGGACTTCCAGTCGATGAAGAAGCGCTGCAAGAGAAACCTGCGGCCAGAAAGATCATCAAACCTCAACTTTTACAGTACAACCACGAAGAACCTCAACATAAATTTACACCAAAAATTTTGCACGGGCAACGAGAATATATTTGCCCGATCCCCAACTGTGGTTACGTTTGTTACGAAGGGTCAATTCTTTTGACACATATGACGTCACACGGTATCCAAGGTCAGGGTCCTTCTCCACATCAGATCCCTCAGCAGCTTCCTTCCCTCACTCACAAACCCACTCTCCCAACTCCCAGCCAGTCTCTTCCGGTCGAATCCAAACCCGTCTGCCGCTCGGGAAAATACGAAAATTTATTCTGCAAGTACCACAACGTGTACTTTGAAACGGCTCGAGGATACCTCAACCATATCCGCACGTGCACAATGGCTCCTCCTATatcaacttttttgaaaaaagaacTCACGCAAGGCTCTGATGGCGTGCAACGTTACTGCAAGCTGTGCGACTTGAGCTTCAGCACATCAGACATGCTGATTCAGCACATGAGCGTGTACCACAAAGGTGTCTCGAGCTCAAAAGAGCAAGATTTGtccaaattgaaagttttaGCTCCTGTTTACAACCCGAAACCGATACCGCAAATGAAGTCCAACAGAAAACACAAATGCCACTTGTGTGGCAAGGTTTTCAATTTACTGCACTCTTTGAACTTCCATCTCAGAACGCACCAATCTCACGTTACCAGTTCGACTTCTACTAACACTTCGTGTAAAGTGTGCAAGAAGACGTTTACGACTCGGAAATCCTGCGCTTCCCATTTAAAAACGCATTTCCTTCCACCAGGTTCGAACAAGCTTTTTTGCTCTACATGCTACAAAACATTCAACACCAGAGTGGAAATTTGCAGGCATCGGTACGACGGTACGTGCCATGCTCCGACAGCTGCTGGAGAATCTTTCCCTTGTGATTTGTGCAACCTTTCTTTCAAAGACGCAACGATACTCAGTAATCACAAATTGAGATTTCACCCGGATATTAAACAGGAGAAAATTGACgaagaggaaaatgaagaacaaATCAAAGAGCAGCCTCCTCAAGAAGATTATCAACAAGAACCTGATCCAAATTCACCCGAGACACCTCAAGTTGCTTACGAAGAAGAAGCTACGTCGTGCATGTTGTGTGGAAAAGATTTCACGTCTTTCTTCAACTTGAAGAGGCACTGCAGATTCATCCACAGGATGCCCGAAGCCAACATAATAAAGATGGCCGAATCGATGGGCGTTTCGCCTTCAAAAATGCAGGGGCCGTCTCCTCAGCCGCGACCTCCTTCAACAccgcaccaaaccagaaaattgaGTCACAATAAATCTTGCAACCGTTGCGGCGAAACGTTTTACCACATGAAGCAATTGCTCGACCATCAGCAACTTTGTCAAGAACCTGTCAGAGAAACGTGCGAGCAGTGCGGGATGCAAACTGATGCTCAGGGGTGCCCCAATTGTGACGCTAGAGGTGCTGAACCGAAAGAATCTAGTGATTCACTATTATTCAAATGCCCCATCGGCCATATGAGTTTCAACGACGAAAACGCCATGCTGAAACATTATAGTTACTGCACTGGCAAATGCGGGCCGTACTTTGAATGCGGTAATTGCGGGTGTGAGTTCCGGTATAGGAAAAATTTCGACACTCACGACTGCGctttgagcaagaaaaaacccACGTATGACTGTTCGGAGTGTCACCGTTCGTTCACCAAGAAATCGTACTTGATGAACCACGAAATGAAGTGTCCACATTTGAATTCCGCAGGAGGTTTTTCTGAACCTGCAGCTCCTCCTACACCAACACCTCCATCTCATCCTCCCCCAAGCAATCCGAATTCTGTGAAGAAAACCAGACAGAGTGGTCCTCTCGACGAGCCGCACGTCGAACTTCCTTTACATTCCGACAAACCTCTGGAAGTCTTCACTTGCGAACAGTGCGAAAAAATCTTCCACTCTCAAAAAGCTCTCAACGGCCACATGTGGATCCACAAACAGTCGACTCCTGAGAATAAAATGTTTTGCAAGTTTTGCGGAAAGGAGAATTTGACGTTGAGTAATTTGTACTCTCACATTTACAAGTGTGTTCGGTCGTTGTTTATGACGGAAGAAGTCCTGACTTGCGAAGACTGCAGTACTTTCCTCAGCCGTTACGACACACCTAAAGAGATCTCCGCTAAGCTGCACATCCACACGCTGAACTGCTACCCCATCCCTTGGTTCCAGAACGAAGGCGAAGTCGAAGGATCGGATAAAATCCTCTGTTACATTTGCTGCCATGCGTTCTCATCCGTCGAGTCTCTCACTATACACAAAATCCAACACAAAAAAGCCAAAGCCAAAAGAAGCTCGAGCTCGCCCTTCTGCAAAAGCCCGCCCAAAAAACGTCCTCGGTACGGACACTTCTCCGCTCCTAAGGTTGAAATCGACATCAACGACATGATCGAAGAAGAAATCCTGTTCGAGAGCGAAGACAGCTCCGCCTCCGCCAGCACCTCCAACACTCTGGCGaccaaattcattttgaactgcCAAGTTTGCAACCGGCAATTCCACAACATAGACAAATTGCGGAACCACGAAAAAGTTCACGGAATCGTTCGCCAAGTCGTCAACGAAACTTCGGACGAAGTTGACGTCGTCGACGTGGAAGGAGGCGCAGCGTAG
Protein Sequence: MTETLENLEVLCRLCLSIEGRVPIFPEGENEDDLSTRIFECVSIQVERNGKLPLNVCSSCVSCIESWYVFKKKCHVTQDALTSMVGELQNQSRKQDDVALCNGDSQSSIQDSAGPEEVCRGLDVAKIVGTNNEAAQDVEASGQDENEPLGDTPRIQDEKADASQPEHENDRVITQTGIPEHVEAETEKPASSVVEGKEDSSHVEQSNGMPAMESDDDSREEMMEEDEEEEYDDFVDEEEFNEPPTGQLVNPKFAAKLNANPDSSSPSGTVQTVDLCEEDDDVCVVEPEIQKINLDEDNESDSDKPGGSKPDQGNSDITLKIESAVTLPDDLMEKDQPPEPKNADEAALPGEAENEQNVTARSSKENSPDRMSANGSVMEDDQFEDDESSQQVPPSVGENSRATPDSTMVSSNTEEPEPYIPLAFDDIKQEVDRGYADEGSSQGYNPVRNVQGKTRDEYERELLSGDTTVDVNNDRCIICDHKFHSISSLLRHTKCKTHIINKQLILKREMGAPIDPKMQALHDRHMLAYRNQWNSGKRRNYASPGIGSGPKRFACKLCRVVAISARDLERHKASKKHKLCVMMGGLPVDEEALQEKPAARKIIKPQLLQYNHEEPQHKFTPKILHGQREYICPIPNCGYVCYEGSILLTHMTSHGIQGQGPSPHQIPQQLPSLTHKPTLPTPSQSLPVESKPVCRSGKYENLFCKYHNVYFETARGYLNHIRTCTMAPPISTFLKKELTQGSDGVQRYCKLCDLSFSTSDMLIQHMSVYHKGVSSSKEQDLSKLKVLAPVYNPKPIPQMKSNRKHKCHLCGKVFNLLHSLNFHLRTHQSHVTSSTSTNTSCKVCKKTFTTRKSCASHLKTHFLPPGSNKLFCSTCYKTFNTRVEICRHRYDGTCHAPTAAGESFPCDLCNLSFKDATILSNHKLRFHPDIKQEKIDEEENEEQIKEQPPQEDYQQEPDPNSPETPQVAYEEEATSCMLCGKDFTSFFNLKRHCRFIHRMPEANIIKMAESMGVSPSKMQGPSPQPRPPSTPHQTRKLSHNKSCNRCGETFYHMKQLLDHQQLCQEPVRETCEQCGMQTDAQGCPNCDARGAEPKESSDSLLFKCPIGHMSFNDENAMLKHYSYCTGKCGPYFECGNCGCEFRYRKNFDTHDCALSKKKPTYDCSECHRSFTKKSYLMNHEMKCPHLNSAGGFSEPAAPPTPTPPSHPPPSNPNSVKKTRQSGPLDEPHVELPLHSDKPLEVFTCEQCEKIFHSQKALNGHMWIHKQSTPENKMFCKFCGKENLTLSNLYSHIYKCVRSLFMTEEVLTCEDCSTFLSRYDTPKEISAKLHIHTLNCYPIPWFQNEGEVEGSDKILCYICCHAFSSVESLTIHKIQHKKAKAKRSSSSPFCKSPPKKRPRYGHFSAPKVEIDINDMIEEEILFESEDSSASASTSNTLATKFILNCQVCNRQFHNIDKLRNHEKVHGIVRQVVNETSDEVDVVDVEGGAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00930811;
90% Identity: -
80% Identity: -