Basic Information

Insect: Apolygus lucorum
Gene Symbol: RpS7
Assembly: GCA_009739505.2
Location: CM019175.2:9408118-9517421[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.011 0.95 10.2 1.4 1 23 331 353 331 353 0.97

2 29 0.00011 0.0087 16.6 0.5 1 23 359 381 359 381 0.96

3 29 0.21 17 6.2 0.4 1 23 387 410 387 410 0.92

4 29 0.0037 0.31 11.7 0.9 1 23 418 441 418 441 0.96

5 29 0.0013 0.11 13.1 1.7 1 23 453 476 453 476 0.92

6 29 0.00029 0.024 15.2 1.9 1 23 482 504 482 504 0.99

7 29 0.0012 0.099 13.3 1.8 1 23 535 557 535 557 0.98

8 29 2.3e-05 0.0019 18.7 0.4 1 23 563 585 563 585 0.98

9 29 0.00078 0.065 13.9 1.5 1 23 591 613 591 613 0.97

10 29 9e-05 0.0075 16.8 2.8 1 23 628 650 628 650 0.98

11 29 0.00016 0.014 16.0 0.3 1 23 656 678 656 678 0.98

12 29 8.3e-05 0.0069 16.9 7.8 1 23 684 706 684 706 0.98

13 29 0.27 23 5.8 1.7 1 23 712 734 712 734 0.93

14 29 0.034 2.8 8.7 4.5 1 23 740 763 740 763 0.96

15 29 0.014 1.2 9.9 1.5 3 23 777 797 775 797 0.97

16 29 2.8e-06 0.00023 21.5 1.2 1 23 803 825 803 825 0.97

17 29 0.015 1.2 9.8 1.8 6 23 835 852 835 852 0.99

18 29 0.0024 0.2 12.3 0.0 1 23 858 881 858 881 0.92

19 29 0.00055 0.046 14.3 2.2 1 23 887 909 887 909 0.97

20 29 0.0033 0.27 11.9 0.2 1 23 915 937 915 937 0.98

21 29 0.011 0.87 10.3 1.7 1 23 944 966 944 966 0.97

22 29 8.3e-05 0.0069 16.9 0.7 1 23 972 994 972 994 0.98

23 29 0.21 17 6.2 4.0 3 23 1010 1033 1008 1033 0.92

24 29 0.00013 0.011 16.3 3.5 1 23 1040 1062 1040 1062 0.98

25 29 0.0025 0.21 12.3 1.1 1 23 1068 1090 1068 1090 0.97

26 29 0.0067 0.55 10.9 1.5 1 23 1096 1118 1096 1118 0.96

27 29 0.054 4.4 8.1 5.0 1 23 1124 1146 1124 1146 0.99

28 29 0.0097 0.81 10.4 4.1 1 23 1153 1175 1153 1175 0.99

29 29 0.00048 0.04 14.5 2.4 1 23 1181 1203 1181 1203 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.011	0.95	10.2	1.4	1	23	331	353	331	353	0.97
2	29	0.00011	0.0087	16.6	0.5	1	23	359	381	359	381	0.96
3	29	0.21	17	6.2	0.4	1	23	387	410	387	410	0.92
4	29	0.0037	0.31	11.7	0.9	1	23	418	441	418	441	0.96
5	29	0.0013	0.11	13.1	1.7	1	23	453	476	453	476	0.92
6	29	0.00029	0.024	15.2	1.9	1	23	482	504	482	504	0.99
7	29	0.0012	0.099	13.3	1.8	1	23	535	557	535	557	0.98
8	29	2.3e-05	0.0019	18.7	0.4	1	23	563	585	563	585	0.98
9	29	0.00078	0.065	13.9	1.5	1	23	591	613	591	613	0.97
10	29	9e-05	0.0075	16.8	2.8	1	23	628	650	628	650	0.98
11	29	0.00016	0.014	16.0	0.3	1	23	656	678	656	678	0.98
12	29	8.3e-05	0.0069	16.9	7.8	1	23	684	706	684	706	0.98
13	29	0.27	23	5.8	1.7	1	23	712	734	712	734	0.93
14	29	0.034	2.8	8.7	4.5	1	23	740	763	740	763	0.96
15	29	0.014	1.2	9.9	1.5	3	23	777	797	775	797	0.97
16	29	2.8e-06	0.00023	21.5	1.2	1	23	803	825	803	825	0.97
17	29	0.015	1.2	9.8	1.8	6	23	835	852	835	852	0.99
18	29	0.0024	0.2	12.3	0.0	1	23	858	881	858	881	0.92
19	29	0.00055	0.046	14.3	2.2	1	23	887	909	887	909	0.97
20	29	0.0033	0.27	11.9	0.2	1	23	915	937	915	937	0.98
21	29	0.011	0.87	10.3	1.7	1	23	944	966	944	966	0.97
22	29	8.3e-05	0.0069	16.9	0.7	1	23	972	994	972	994	0.98
23	29	0.21	17	6.2	4.0	3	23	1010	1033	1008	1033	0.92
24	29	0.00013	0.011	16.3	3.5	1	23	1040	1062	1040	1062	0.98
25	29	0.0025	0.21	12.3	1.1	1	23	1068	1090	1068	1090	0.97
26	29	0.0067	0.55	10.9	1.5	1	23	1096	1118	1096	1118	0.96
27	29	0.054	4.4	8.1	5.0	1	23	1124	1146	1124	1146	0.99
28	29	0.0097	0.81	10.4	4.1	1	23	1153	1175	1153	1175	0.99
29	29	0.00048	0.04	14.5	2.4	1	23	1181	1203	1181	1203	0.97

Sequence Information

Coding Sequence: ATGGTAGTTCACCCTAAGATCATCAAAGCCGGCGGCGCCGAAGCCGATGCGACTGAAGCTTCCATCGCTCAGGCTCTCCTCGATCTGGAGATGAACTCCGACCTCAAGGCTCAGCTGAGGGAGCTCCACATCACCAAGGCGAAGGAACTCGAGTTGTCCGGAAGGAAGtcgATCATCATCTACGTGCCGATGCCCCAGTTGAAGAACTTCCAAAAAGTTCAAATCCGCCTCGTTCGTGAGCTCGAGAAGAAGTTTTCGGGGAAACACGTCGTTTTCGTCGGAGATAGGAAAATCCTTCCCAAGCCGACGAGGAAAACCCGCACTCAGAGCAAGCAGAAGCGTCCTAGAAGTCGTACTCTGACTGCTGTCTACGACGGTATTCTCGAAGACATGGTGTTCCCCTCTGAAATCGTCGGCAAGAGGATCAGGATCAAACTTGACGGCAAACAGCTGATCAAAGTCCATCTGGACAAACTCCAGCAAACCAACATCGAGCACAAGGTCGACACCTTCGCTGCCGTTTACAAGAAACTGACGGGACGAGAGGTTACATTCGAGTTCCCTGAACCTTACTTTCAAGCCATCGCAAATTTATCACAGGTCGAAGTAATCGAGATGTCTGACGACGAAAGTGAAGCGGAAGTCGAGCGAGCTCCGGACCTCGTCGGCTTCGACTACGACTTCAGCGCCGATTTCGTTCCCTCGGAGGAGGATGCAGGCTCCGGCTCGGATTGGAGCGCCAGCGCCGAAGAGCCCAAACCGAAGAGGAAGAAGGCAACGGCGAAGAAGGGAGGGAAAGCCAAGAAAGGGGGTACGGAAATCATCAGTTTCGACAAAAACGTCGAATTCGTCATCATCAAAGATGAACAGGAAGACGAAGATGGCGACGATGcaCCAATGCTCGAGTGTTACGAATGTGGCTACAAATGCTTGAAGAGGCAGAGGCAGAATCTCGTTCGCCATATGGTCAAACATTCTgGTGAAAAGCCCTTCGTTTGTCAGTATTGTGACTTTGCAACCGGCTATGAACACGCTCTCAAACGTCACTTGTCTCAACACACAGGTGAAAAGCCGTACCTCTGCTCGTTTTGCGACTACTCCACGGCGTACCCTTCGGCTTTGAGGAAACACCTTCAAACTCACGATGAAGAGAAGCCGTACAATTGCGATCAATGTGACTTCTCCACTGTCTACATCTCATCAATACGGAAGCATGTGCTTGCAAAACACTCAGCTGAAGaggacaaaccgttcagctGCGACCAGTGCGATTTCCGTACCATCCAAAGACAGGCTCTTCAGAGACATGTCCTCTCCAAACACACAGAAGGGGGTGCGGCTGCGAAGGGAAAAGTTCACAAATGCGATCAGTGTGATTACTCAACTTCCCTGAAAAGCACCTTGATGAATCACATGGTTGCCAAACACACTGaatCACACCTATACCAGTGCGACCAGTGTGATTTCCGCTCCAACTACGCGCTTTCTCTCAAAAGACACATGAAAACGCACGGCGAAAGTGATCAGGAAGCTGTCGTGTTCGAAGAAGGAGAATCGGAAGGTGAAAAGGAGCGCCCGATAAAAACAGAAGGTTCAAAATCCTACAGTTGTGATATTTGCGACTTCAGCACGTTTTACCAAACGGCTTTGAAGAGGCACCAATTCATGCATACAGGGGAAAAACCTTTCGAATGCACAATTTGCGGTTACAGGACGGCGTATAAGTCTGCGTTGAAAACGCACATCGAAAGGCACGATGGGTTGAAACCTCACGAATGCACGCTTTGCGATTACAAGACGAATTCTAAGTCAGCGTTGAAAGTTCACGTTGAAAGGCACCAAGAAAAGATGTCCGGAGAGTTGAAAGAAAAATTCCGGCCGTTCCCTTGCGATTTCTGCGACTACCGGGCGAAAAACTTGTACCACCTGACGAGTCACATGAGAACGCATACCGGGGAAAAACCATATCCTTGCGACGAGTGCGACTATGCAGCTGTTCATCAAACCAACTTGATCGCCCACAAAAGACGCCACACCGGCGAGCGACCGTTCAAATGCCACTATTGCGATCATCGGACGGCACAACCACAGCACCTCAAAAGACACATGAGACTCCACACCGGGGAAAAGCCGTATCATTGCGACGAATGCGAATTCAAATCGGCCGATAAACGAAGTTTAGACAGACACAAAGTTTTACATACAGGCGATACGAAGTTCACTTGTGAGACCTGCTTATTCAAAACGAATTCGAAGTCTCATTTCAGTCAACACATGAGGGCTAATCACTCTCCTCTCGAgattgaaaaagaagaaaaactttaCGGGTGTGAAGTCTGCGACTACAAGTCCAAAGACCGCAGCCACGCTCTCAAACACCTCATGCGACACGCCGGTATTAAGCCCTTCGCGTGCACGGAGTGCGACTACCGGTTCACGGAGAAGTTTTCCCTCAAAGCCCACATGATGACCCACACTGGGGAGAAACCTTATGCGTGCCCTTGCGGGTACAGGTGCGCTTTGAAGAAAAATCTCAAGTACCACATGAGAACGCATACGGGTGAAAAGCCCTATCCTTGTGATGAATGTGACTACACGGCTGCCACCAGTAGTGCTTTGAGGATCCATAAAATTGGACGTCATTCCGAAGTGAAGCCTTACAAGTGCCACGAATGCGACTACACCACCGGATACTCGTCAGCCTTGAAATCCCACAAAGCCTCGCACACGAGCGGTAAGCGGTACAAGTGCGACGTGTGCGATTTCGAAACTGCCCGCGTAGCGTCTATGAAGATCCACATGAAAAACCACAGACCCTCCGAGCAACCTTACTACTGCGCCTCCTGCACCTACAAAACCTACTACCGCTCAGCTTTGGTGCGCCACATGAAACTCCACGCCGATAGCGATGATTTCTCTTGCAACATCTGCGACTACCGGACGAACTTTCAACCTGAATTGAGGAAGCATATGCTCGTTCATGCCGGTCAAACGGAAAAAGAAGAAACTGGAGAAAAGTCTTGGGATTGCAAAGTCCCGAATTGCAATTTCAAAACCAACATGACGCACCACCTCTACAGGCACATGCGAACTATGCACTCCTCCGGAAGCCAAAAGTACGACTGTACGTACTGCGAATTCACCACCTGTTACAATTCGGCTCTTATTCGACACATGAAAACTCACGCAGGTGCCAAACCTTACGCCTGCGATTTGTGCGAGTACAGGACCGAACACAATTTCTCCCTCATGAAACACATGATCGTACATTCCGACGAGAAGCCCCACGCCTGCCCTCACTGCCTCTTCCGAACCGGCTACCAATCAGCGCTCATCCGCCACATCAAAATCCACAccgGTGAGCGCCCTTACAAATGCACAAAATGCGATTTCAAAAGCGGTCATCACTTCGCTCTCGTTCGACACCTAAAAATTCATAACGGTGGTGACGGTCCTTTCCAATGCACTCATTGCGCCTTTCAAACGAACCACGTCTATGCCTTGGAGCGGCACATGATGACTCATACAGGAGAGAAACCCTTCGCCTGCGGGATGTGCAATTACCGGTGCACCCGTCAGTACGGCCTCATCAAACACCTCAAGTTGCATCAAAACGAAGCTTCGGCGGCCATGACGGGCGAAGTCGACGAAAGCGGCGAAGTCCTCGACGCGGTCGCCAAAATCGAAGTCGAAGAAGACGGCGAAGTCGAGTACGAGGAGTATGAAGATTACGAAGAGGCGGTGGAGTTTGTTGAAGAGATGCCAGTCGACGTTCAGGAGTACAAGGGGAAGGTGGAGGTCGAATACACCAACGAGgTTGAAGGATATGAGGTTGAAGAGGAGGCCGTCGACTGCGCTTCAGTGGCCTATGAGGTGCAGATTGAAGATGCGGATGTTGGAGAGGGTGATTATGAAGAAGAACAGATGGAGGTATCCGACGTCCCAGAAGCGGCTGAAGTGATCATCGGGGAAGAAGGCGACTCTGTTACTGACGAATCGCTTTTCGCCATGCAGAGAATCTCGACGGAGAAAATCAACGAATACTTCTCCAGAAAGGAAGATCAACAGGTTTCACTCACTCGAAGGTACAGTCACGCCAAGTGA
Protein Sequence: MVVHPKIIKAGGAEADATEASIAQALLDLEMNSDLKAQLRELHITKAKELELSGRKSIIIYVPMPQLKNFQKVQIRLVRELEKKFSGKHVVFVGDRKILPKPTRKTRTQSKQKRPRSRTLTAVYDGILEDMVFPSEIVGKRIRIKLDGKQLIKVHLDKLQQTNIEHKVDTFAAVYKKLTGREVTFEFPEPYFQAIANLSQVEVIEMSDDESEAEVERAPDLVGFDYDFSADFVPSEEDAGSGSDWSASAEEPKPKRKKATAKKGGKAKKGGTEIISFDKNVEFVIIKDEQEDEDGDDAPMLECYECGYKCLKRQRQNLVRHMVKHSGEKPFVCQYCDFATGYEHALKRHLSQHTGEKPYLCSFCDYSTAYPSALRKHLQTHDEEKPYNCDQCDFSTVYISSIRKHVLAKHSAEEDKPFSCDQCDFRTIQRQALQRHVLSKHTEGGAAAKGKVHKCDQCDYSTSLKSTLMNHMVAKHTESHLYQCDQCDFRSNYALSLKRHMKTHGESDQEAVVFEEGESEGEKERPIKTEGSKSYSCDICDFSTFYQTALKRHQFMHTGEKPFECTICGYRTAYKSALKTHIERHDGLKPHECTLCDYKTNSKSALKVHVERHQEKMSGELKEKFRPFPCDFCDYRAKNLYHLTSHMRTHTGEKPYPCDECDYAAVHQTNLIAHKRRHTGERPFKCHYCDHRTAQPQHLKRHMRLHTGEKPYHCDECEFKSADKRSLDRHKVLHTGDTKFTCETCLFKTNSKSHFSQHMRANHSPLEIEKEEKLYGCEVCDYKSKDRSHALKHLMRHAGIKPFACTECDYRFTEKFSLKAHMMTHTGEKPYACPCGYRCALKKNLKYHMRTHTGEKPYPCDECDYTAATSSALRIHKIGRHSEVKPYKCHECDYTTGYSSALKSHKASHTSGKRYKCDVCDFETARVASMKIHMKNHRPSEQPYYCASCTYKTYYRSALVRHMKLHADSDDFSCNICDYRTNFQPELRKHMLVHAGQTEKEETGEKSWDCKVPNCNFKTNMTHHLYRHMRTMHSSGSQKYDCTYCEFTTCYNSALIRHMKTHAGAKPYACDLCEYRTEHNFSLMKHMIVHSDEKPHACPHCLFRTGYQSALIRHIKIHTGERPYKCTKCDFKSGHHFALVRHLKIHNGGDGPFQCTHCAFQTNHVYALERHMMTHTGEKPFACGMCNYRCTRQYGLIKHLKLHQNEASAAMTGEVDESGEVLDAVAKIEVEEDGEVEYEEYEDYEEAVEFVEEMPVDVQEYKGKVEVEYTNEVEGYEVEEEAVDCASVAYEVQIEDADVGEGDYEEEQMEVSDVPEAAEVIIGEEGDSVTDESLFAMQRISTEKINEYFSRKEDQQVSLTRRYSHAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -