Aluc012788.1
Basic Information
- Insect
- Apolygus lucorum
- Gene Symbol
- Mblk-1
- Assembly
- GCA_009739505.2
- Location
- CM019180.2:10484459-10605312[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-17 2.3e-14 52.9 0.0 1 39 132 171 132 175 0.95 2 2 2.2e-18 1e-15 57.3 0.0 1 43 396 439 396 441 0.95
Sequence Information
- Coding Sequence
- ATGGGACGCAGGTCATGGGCCAGCTACCAGGACACCATGGTCGGCCAAGAGTGTAGGACCACTGAGCCAATATGTCCTTCTCACACGGTCAGTGAAAACAAAAAAATCAGCGAGGTGAGCGGGGATCGGAGCGGGAGCAGCAGCCCAGGGGTTATGGCCACCTCCTCCCCGTCGCCCTGGTACATCAAGCCCTCCGACTCGCCGCCTCTGGACGTGGTCGATCAACCTCTCGACCTGAGCCTGTCGACGAAACCTTCGACCATCGAACGGCCGCAGCCCTTCGCCAGTCCCCCCGGCCCCCTCACGAGTCACCCCATCAAAGTCCCCAGCCCCAACAAGCAAATATTTAAGGCGAAGCCAAGGCTGAGTGCGGTCGCTGGGCGCCGGACGTATACGGAGGAAGAGCTGCAAGCCGCCCTTAGGGACATACAGAGCGGGAAGCTCGGGACCCGACGGGCGGCCGTCATATACGGCATCCCGAGGTCCACGCTAAGGAACAAGGTGTACAAATTGTCCCAGGAAAGGAGGGACGTAGGTGCTTTAGAGATTACGAGGGATGAtgacgatgatgatgatgacagGGACCTGTCGGAGGAGGAGAGAGAAGTGGAGAAAGTGCTGATGCGGCCATTGCTGAGGATGGAAGACGTCGTGCGGCTGCCCGAGGGGCCGTCCTGGCCGTACCTGCAGCAGCTGCTGTCGCCGGCGGCGCTGCCCGAGATCGTCCGGAATATGATGGCCGAGGAGAGGTTGCTCCGGGGGTCGACGCGGCCGGGCTGCTCGACGGACAAGGAGGACGCCGGGGTCATCCTCCGAGTTCCGAATTTCCGACCCAAAGACGGCGGAGGGGGGTCGCCCGACTGCGGCCCCAGGACGCCGTCGCCGCCTCACAAAAACCCCCCAATTAGCCTACGAGACGTCATCACCAACACTATTAGCTCTAAACTATCGCCTCAAGAAGTCAACGTCGTCACTCCTCCATCACATCCTCAACCTTTAGACTTCAGAAGAGAACCCGGAGTGATTCGTAACCACAATAACAACCACTTAGACGACAAGAAGCTGTCTCCAGGTAATAAAAGTACGGCCTCGACGAACACGAACAGCAGCAGCAGTGGGACTCAACAAGGACAAAGTTCAGGTGGAAAAGGGACGAGACCTAAGCGAGGCAAATACAGAAATTACGATAGAGATAGTTTAGTTGAGGCGGTCAGAGCGGTCCAACGAGGAGAAATGAGTGTTCATCGAGCGGGTTCGTATTACGGAGTTCCACATTCAACCTTAGAGTACAAAGTCAAGGAGAGGCATTTGATGAGGCCGAGGAAGAGGGAGCCGAAGCCTCAAGTGACTGCGGAGGCCGAGGCGAAGGGGAAGGTGGAAGTGCGAGCGCCGCCGAGGCTGCAAAGGTTCACGCCGCCGCTGCCGCCTGGGGCAGTCACCAATGGGTTGAAGGTTCCGCCTGGGTTCGACCCCGCGGCTTTAGGGGCGTATCCACCGGCGCTGCCTTTCCCTTTCTGGGCGTCGCCGCCGTTCCCAGGGATCCCGGGGCTCGACTACGCGGCGTCCCGGGACCTCTTCGCGTCGCAGATGATGCAGAGGCTCCACGAAGAGTCAGCCTCGAACCCGCAAGCCGCCGCCAATCTGCCCAAGAGCACCAGAGCTCTCGCTGAAAGCCTCTACGACGGCTCGGGCGAGAACGGCACCTTCCTCGACGGCATCATCCGGTCGAGCCTCGAGACCGGCCTGTCCGGAACGGGCAAGGAAGCCGGCCGCGCCCTCCTCGAACAGCTCGTCCGCGGCGGCGTCCTCGCCGACAAGACGACGGAGACGTCCTCCTCCGCCTCCAAAACCCCGCCCCCGCCGCGACCCCCGTCGACGCCCGAAGACCGACCTCCAAGTGCCTCGTGCGACCCGACCACATGCTGA
- Protein Sequence
- MGRRSWASYQDTMVGQECRTTEPICPSHTVSENKKISEVSGDRSGSSSPGVMATSSPSPWYIKPSDSPPLDVVDQPLDLSLSTKPSTIERPQPFASPPGPLTSHPIKVPSPNKQIFKAKPRLSAVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLSQERRDVGALEITRDDDDDDDDRDLSEEEREVEKVLMRPLLRMEDVVRLPEGPSWPYLQQLLSPAALPEIVRNMMAEERLLRGSTRPGCSTDKEDAGVILRVPNFRPKDGGGGSPDCGPRTPSPPHKNPPISLRDVITNTISSKLSPQEVNVVTPPSHPQPLDFRREPGVIRNHNNNHLDDKKLSPGNKSTASTNTNSSSSGTQQGQSSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQVTAEAEAKGKVEVRAPPRLQRFTPPLPPGAVTNGLKVPPGFDPAALGAYPPALPFPFWASPPFPGIPGLDYAASRDLFASQMMQRLHEESASNPQAAANLPKSTRALAESLYDGSGENGTFLDGIIRSSLETGLSGTGKEAGRALLEQLVRGGVLADKTTETSSSASKTPPPPRPPSTPEDRPPSASCDPTTC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883697;
- 90% Identity
- iTF_00883697;
- 80% Identity
- -