Aluc016533.1
Basic Information
- Insect
- Apolygus lucorum
- Gene Symbol
- kn
- Assembly
- GCA_009739505.2
- Location
- CM019173.2:9801166-10039005[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-240 7.3e-236 784.1 0.1 41 387 69 425 65 427 0.99 2 2 6.6e-08 0.0013 17.3 7.3 425 508 439 518 429 541 0.60
Sequence Information
- Coding Sequence
- ATGACGGCTGTTGAGTGTGGCGGTTACGGGTCCGGCTCGCCGTGGGCCGCGAGCCTCTGCGGCGCCGCCGACCTCGAGGCCTGGGGCCGCAAACTGTATCCCGGGAGTCGCATGTTCCTCCAGGACACGCTCCACCACCAGCCCCGCGGTCCCGTGTCCGGTCTCAAAGAAGAGCCTCTGCCTCCCAGGTCCTGGCCAGTCGACAACTCCAGTGTGGGAGTCGGTCGTGCTCATTTCGAAAAACAACCGCCTTCGAATTTGAGGAAGTCGAATTTCTTCCATTTTGTGATAGCTTTGTACGACAGAGCCGGTCAACCCATCGAGATCGAGCGGACGGCTTTCATCGGATTCATCGAGAAAGACCAGGAAAACGAAACGCAAAAAACCAACAACGGTATTCAATATCGGTTACAACTGCTCTACGCCAATGGAATACGGCAAGAGCAAGACATATTCGTGAGGTTGATCGACTCCGTCACGAAACAGGCAATCATTTATGAAGGCCAAGACAAGAACCCTGAAATGTGCAGAGTTCTGCTCACGCACGAAGTCATGTGCAGTCGGTGCTGTGATAAGAAGAGTTGTGGGAACAGGAACGAAACTCCGTCAGACCCGGTGATAATCGACAGGTTTTTTCTGAAGTTCTTCCTGAAATGCAACCAAAACTGCCTGAAAAATGCGGGGAATCCAAGGGATATGCGACGATTTCAGGTTGTCATTTCGACTCAGGTGAGCGTTGAAGGGCCTCTGCTAGCCGTGTCGGACAACATGTTCGTCCACAATAATTCGAAACATGGGAGAAGGGCGAAACGGATAGACCCTTCAGACGGCGAGTCAAGTCTATACCCTCCTCTCCCCGTGGCAACGCCCTGCATCAAAGCCATCTCCCCCAGCGAGGGCTGGACCAGTGGGGGATCGACTGTCATCATCATCGGCGACAACTTCTTCGACGGCCTCCAAGTCGTCTTTGGAACCATGCTCGTGTGGAGCGAGCTCATCACCTCGCATGCAATCAGAGTGCAGACGCCCCCGCGGCACATACCTGGAGTGGTGGAAGTCACACTTTCCTACAAGAGCAAGCAGTTCTGCAAAGGGGCTCCTGGGAGATTCGTTTATGTCTctttGAACGAACCGACGATCGACTACGGTTTTCAGAGGCTACAGAAATTGATCCCGAGGCACCCTGGAGACCCCGAAAAATTACCCAAGGAAATTATCCTGAAGAGGGCGGCCGACTTGGCAGAAGCTCTGTATTCGATGCCTCGGAACAACCAGCTCAGCGGACCGCGGACTCCACCTCCGAACAATAACACGTCTTTCAACTCCTATTCTGGACAACTGGCTGTCACAGTTCACGAAAACAACGGCCAATGGACTGAAGAAGAATATGGTCGTGGGCAAGCTGGTAGTGTCTCACCAAGGGGATACGGGTCGTCGACGTCAACGCCTCATTCGTCTAATGGAGGATACAACAGCGCCCCTGGAGCCCCGCCGTACCCTCCAGTCTCCCAACCTACTTCAGGAGTCGGAGGTCTCGTTTCTTCGCCCTTCGCTACCATGAACCCTTTCGCCCTTCCAACGTGCAATTCTCAAAGTTATTCACCCATCGTCGGCCCTTCCTCTAAATAA
- Protein Sequence
- MTAVECGGYGSGSPWAASLCGAADLEAWGRKLYPGSRMFLQDTLHHQPRGPVSGLKEEPLPPRSWPVDNSSVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQENETQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVSVEGPLLAVSDNMFVHNNSKHGRRAKRIDPSDGESSLYPPLPVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSGPRTPPPNNNTSFNSYSGQLAVTVHENNGQWTEEEYGRGQAGSVSPRGYGSSTSTPHSSNGGYNSAPGAPPYPPVSQPTSGVGGLVSSPFATMNPFALPTCNSQSYSPIVGPSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00843290;
- 90% Identity
- iTF_00339635;
- 80% Identity
- -