Basic Information

Insect: Apodemia mormo
Gene Symbol: -
Assembly: GCA_036924255.1
Location: JAUPFN010000003.1:14765423-14778440[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.6 5e+02 2.8 1.2 1 23 54 77 54 77 0.93

2 18 0.0076 1.1 11.3 2.9 1 23 84 107 84 107 0.97

3 18 0.0018 0.25 13.3 1.0 2 23 206 227 205 227 0.97

4 18 0.4 56 5.9 4.2 2 22 492 512 491 512 0.96

5 18 0.22 31 6.7 0.6 2 23 762 783 761 783 0.96

6 18 0.066 9.2 8.3 1.4 2 23 855 876 854 876 0.96

7 18 0.24 33 6.6 0.5 1 23 884 906 884 906 0.96

8 18 0.072 9.9 8.2 3.5 1 23 942 964 942 964 0.95

9 18 2.7e-05 0.0037 19.0 2.0 1 23 972 994 972 994 0.99

10 18 0.26 36 6.4 2.3 1 23 1075 1097 1075 1097 0.98

11 18 0.032 4.5 9.3 2.5 1 23 1153 1175 1153 1175 0.96

12 18 0.17 23 7.0 0.6 1 23 1181 1203 1181 1203 0.96

13 18 0.0037 0.51 12.3 0.3 1 23 1270 1292 1270 1292 0.95

14 18 0.014 1.9 10.5 1.1 1 23 1298 1320 1298 1320 0.96

15 18 0.007 0.97 11.4 2.6 1 23 1410 1432 1410 1432 0.97

16 18 0.00018 0.024 16.4 1.4 1 23 1438 1460 1438 1460 0.99

17 18 6.5 9e+02 2.1 1.1 1 23 1550 1572 1550 1572 0.95

18 18 0.11 16 7.6 2.5 2 23 1585 1606 1584 1606 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.6	5e+02	2.8	1.2	1	23	54	77	54	77	0.93
2	18	0.0076	1.1	11.3	2.9	1	23	84	107	84	107	0.97
3	18	0.0018	0.25	13.3	1.0	2	23	206	227	205	227	0.97
4	18	0.4	56	5.9	4.2	2	22	492	512	491	512	0.96
5	18	0.22	31	6.7	0.6	2	23	762	783	761	783	0.96
6	18	0.066	9.2	8.3	1.4	2	23	855	876	854	876	0.96
7	18	0.24	33	6.6	0.5	1	23	884	906	884	906	0.96
8	18	0.072	9.9	8.2	3.5	1	23	942	964	942	964	0.95
9	18	2.7e-05	0.0037	19.0	2.0	1	23	972	994	972	994	0.99
10	18	0.26	36	6.4	2.3	1	23	1075	1097	1075	1097	0.98
11	18	0.032	4.5	9.3	2.5	1	23	1153	1175	1153	1175	0.96
12	18	0.17	23	7.0	0.6	1	23	1181	1203	1181	1203	0.96
13	18	0.0037	0.51	12.3	0.3	1	23	1270	1292	1270	1292	0.95
14	18	0.014	1.9	10.5	1.1	1	23	1298	1320	1298	1320	0.96
15	18	0.007	0.97	11.4	2.6	1	23	1410	1432	1410	1432	0.97
16	18	0.00018	0.024	16.4	1.4	1	23	1438	1460	1438	1460	0.99
17	18	6.5	9e+02	2.1	1.1	1	23	1550	1572	1550	1572	0.95
18	18	0.11	16	7.6	2.5	2	23	1585	1606	1584	1606	0.98

Sequence Information

Coding Sequence: ATGCTACAACAGATGTCCTCGCCGCCGAGCGCGCAATTCGGTGAGGTCGCGACTCTCACGCGCCACATCGAAGGCCGCCTCTGCGGCGACGCTTCTTCGGAGGCCTCCTCGGACGCAGCTGAAGATTTGGAACTACCTCAGTGCAAAATCAAACGGAACTACAGTTGCACTAAGTGTAAATTCTATACACAAAACCCACGTGCGTTTTTAGTGCATTCCAGGGACGTTCACTTTGAAAAGATCAAGATTTACGATTGTCCTCATTGCGTTTACGCATCGAGACACCAACAGAAGTTAACAAGACACGTTAAAATGGTCCACGAATCGTCGTCATCGAAAGACCCGGAGCAGTCGCGTGCCACTCCAGAAATTAATGACCCTATTGAAAGAATGGAAGATTTACTCGAAGAAGTCGAGGAATGTGACGACATGGATATCGATGATGGCAATGACCCTCACGATCGCTTATTGGATGGCGATGGAATGACTGAATCGTCATCGTATATTTTGCCAAAagacaaaaataacttttattctTGCAGTAAATGCAATTATGTGACCCACATAAGGACACGGTATACGAAACACGTGAAATACCATTCTATGCCAATGATAAAGTGTACTATGTGTGACTTCCGTACACCTTACAAATGGAATTTGGACAGGCACATGAAGAATCACGGTGGTACTGGTAGTTTCCACTGTTCGATGTGCAATTTCACGGCTGACATAAGACAGAGTTTAACAGTGCACGAGATGAATCATCATACCCCGCCAGTTGGTCAGTCTGCGGGCATCCGTCGTCGCAACAGAGTGGGTGCCAGTGATATCACGGGGGCCATAGATGAAACTTCCCTTATAATGAAGGAAGAAGAGGGAAGTGGAGACTCGAGGTCTTCGCTGTGTGCATCGgaTATGGGTCTCCAGTTCGCACAAACTGACAGGGAGATGGTTAACTGTCATAGTGATTCCAATGAAGCTACAACTTCGGACACCATGACTAAAAGTGAAGCAAATCATATGAAACAATCACCAGGTCATTCTCCAAATAGTACTTCAGATGATAAAAAACACAGCAGGAAGATTCCTAGACCTATTCCTCAACTGATACCCTTAAATGCTTCAACACCTAATCAAACCCCAGGTAAACCACTACCAGGAGAACCTCCAGCGAAAAAAGTTAAAGAGTCTGCAGATGTCGAGGAAACTGACAAAAGTAACGATTTACCGTCTGATATGACATTAAACTCTGCAATGCCAAAAGAAATTTCTATTCGTAAAAAGAATGAATCATTCTTCGACAAACTTAAGGAAAGACTTTTAACAGAGACTGGTGAAGATGGAGTACTCATTTGCAAAAACTGTGGTTTCCAGAGCAAATGTTTGTCAGAACATTCAGTTCACGAAAAAACATGCTTATtacaattcaataaaatatcatCAAATCCCTTGCATCAAAATTTGGGATCAACGCGATGTCAAAATTGCAGGCATCGATGCAAATCAAGCGCCGACTTATACCTTCATATGAAAACTTGTGTCAAAAATGATTTCACCATCAGAGATCCTGCTTCAGGTATACCAAATTTAGAACATAGAAACACAATTACAAAATCATCAATAGATTCAGAACGTCATCCAATGGAAAATGTTGTATTTGTTTGGAACAATATTAATCAAAGTGCAAGTAAATTTAACACTCCGTTagacataaatattaatgacgATTCCACATTGCCAGAACAAAGGACATTAGATTCAGATATAGCGGACGACGGCGAAAACATGAATTTGTCTCCAAGTCAAGCCGCCGGTAAAAAGGTTTTTAAATGTCCCCATTGTATGTTTTGGGCCTCTACTGCTTCCCGTTTTCATGTTCATATAGTTGgtcatttaaacaaaaaaccgtTTGAGTGCTCGCTTTGCAAATACAAGTCCAATTGGCGGTGGGATATAACAAAGCATATAAAGTTAAAATCAGCTAGAGACCCGGAGCATACTGAAGCAAAAGTTCTCATGACTGATGAAACCGGCCGACGAAATTACAGCAAATACAACAAATTCTTAGCAGTATCGGTTCTAAACGAAAATGGAGAAAATGAGTTCCATTATATCGATCAAAATGCTGCTGCAGATGCAACGATAGATGAAGAATCAGTTAATGATGTAAATGATAGCATGAACCCATCCTTTGATATGCAACCTTTAAACTTGCAAACGCATCCAAGCGATATGAACATCGGTTCTGACAATGATATGAAAAGGCCTAAGAAGACTCTTTGGAAATGCAAGAAATGCAATTACAAGGATTCATCAAAAGAAGCATTGTTAGAACACGTCCGAGAGCATTCCAAGGAAGAGGCAGAGAACAAAAAACCGGAAAATATGCCTGATCCAGCAGATTTGGCCTACCGTTGTGGACATTGTAACCAGTTGTCTAACTGGAAACACGTAATACAGAGGCATTGCCGATTGAAGCACGAAGGCATAATAAAAGTTATAACTACCGTCAAACCAAAGCCAGATTTGAGTGCCATGACAGCAAACGATGGCCAATCCGATATGTGTACGAAGTGTCCCTTTAAAACAAATGATAAAAACGCACTGCTTGCGCACTTACAGCATCATCAACCCTCGCCTCAGTCAgtatataaatgttatttatgtCCATTTTTTGTTAAAGAAGAATATGAACTTAATCAACATTTAGTTCTACATGGTATTAACGATCCTGATGACTATGAATTTATCGCTAAAACAATGGGTAACAAATCACCTTTTCATGAAACAAGCTCCACGCCAAATCATTCTTCTAACAAGCGACACAAATGCAATGAATGCCCGTACGAAACAAATAGCAAATCTCAATTTATGTATCACGAACAATTTCATAGGATTTCAACGGATACGCCTTACAAATGCCCTGAATGTAATTACAGTGTTTCTAAAAGACATTTGTTGAATCAACATTTAAGAGTCCATGGGATAATTCCTAAGAAATTTGAAATGGATGATATGGAAGGATTTTCTGCAAACTATAATCAAAATTATGAAGAATCCTCTACAAACTTTGACGAAATTCCGTTTGTCTGGGTATCTGCCAAGAACGAGTTCCACAAAATGTTCAAATGTCGATATTGTTCATATGTAAATTCTCAAAAATGTAAGATTCCAAATCATGAAAAAATTCATTGTATTAGTTTTGATGGTGAGATTACGTGTTATAAGTGTTTAGAATGTAAGTTTACATGTGATAATAAGATTAGGTTAGCTGAGCATGCAAAGTCACATGGTGAATTATATGGTCGTATTTATTGTCCTGTAGAATTAGATATACCTGATGAGGAACAAATAGCTAAACTGCGAAAAGTAATAGATGAAGAACAGTTAAACTCCTTAAATGATTCCCCAAAAGACGGACAAGTTTTAGAAGAAAATAGGGAAactaaaacattatatttttgccACAAGTGTCCAGcaagattttttgaagaaagTGAATTAAAAGTTCACGAGAAATTCCAtgatttaacattttctttcaaatgCAAAAGTTGTGAGTTTTCTGTACCACaggaaaatgaattaaaatccCACAATTCTGTTCATTCTGATGAATATAATACTAGAACCAAAATGTTGAAATTTGTGCACAAAATTCATTTAGCGCACAAAGCACCTAGGCTACAATATGTCCATTGCCCTGCTACTTCTGAGATAACATGGGTTGCTGCAGAACCAGATAAAAAATACGTTAATGAACATTCTATTAAAAAATCCGGTGACGTAAAGAATACACCAAAACAATATATTTGTAAAGAATGTCCtgcaaaattctttaaaagTTCAGCATTAAGCTATCATATGGGGCTGCACGGTGGAGAAGGTGAAcacaaatgtaaaaaatgtagtTATGCAGTCAAAAATGTTGGTAATTTAGCTAAGCATGAGTTATTGCATGAAAATGAGGGAAAGCCACCTCCATGTGACTATGAATCTGGAGATGATccagattataaaaatattcctcTCTCCGGTACCGatttatttcaaagaaaaaCAGAAGCTCAAAAGAGAGTATTGACAGACAAAGATAAATTGGTAAAACCAAATGACCATTTCCCCCCCGTTTTACAAGCTGATCCTCAATTCGGATATTTAATGCACGGTAATCCAGAGTTTATATATccgacatatttaaaaaatggccGCCAGAAAGAAAAACGTTACAAATGTCACAAATGTCCCTCTGCATTTGAAAAGAGAgaacaatataaaatacatttatctttACATGGATCGAAACAGAGATATAAATGCGAACTTTGTGATTATTCTGTTAAATACTACGCTAATTATGTCCAACACATGAGAAAACATCAAATGAATGATGAAGCCCAAGCTGAAAGGAAGAAAATTAATGGTTACGAGGAATCAGAGGGTGATAACAGAGAAAATAAGGAAGATGAGAACAGTGGTAACATTAAGTTAGCAATCAAAACAATGCCAAAGAGACTACCGCGTAGTGATTTTCAACAATTCTCAATAAGTGATCAACAAACTCTTCGACTATTACAACGTAGACGGTCAATTGAAAGTGctatgaaagaaaataatacaGATGCACCCGTCAAAGATCGAAAGCATCATGTCTGTCTCTTCTGTCCGTACACAAATCAGAGGTTAGACGCTGTAACTAACCACATTAAAAGGCACAACGAACGCGAGTTAGCGAAGTTGAGCGGAAACCAAAAATGTTCCTTTTGTAATTTAGTCGTAGTTCAAACACATTTCTTACGTGAGCATTTAAAAACTCATTTCACTTATCAGAAAAACCTTATACCTGATTGTTTTGTAGCAAatgaaaatattagttttacGATAAAAAAGTTAGATGAAAATGAAGAGTGCACCGATATTAAATTAGAAACACCAGTAAATATAATTAGCGATGATGATAAAATGTATGTGAAAATTAGTACTGGAGAAGTTGTAGAATAG
Protein Sequence: MLQQMSSPPSAQFGEVATLTRHIEGRLCGDASSEASSDAAEDLELPQCKIKRNYSCTKCKFYTQNPRAFLVHSRDVHFEKIKIYDCPHCVYASRHQQKLTRHVKMVHESSSSKDPEQSRATPEINDPIERMEDLLEEVEECDDMDIDDGNDPHDRLLDGDGMTESSSYILPKDKNNFYSCSKCNYVTHIRTRYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFHCSMCNFTADIRQSLTVHEMNHHTPPVGQSAGIRRRNRVGASDITGAIDETSLIMKEEEGSGDSRSSLCASDMGLQFAQTDREMVNCHSDSNEATTSDTMTKSEANHMKQSPGHSPNSTSDDKKHSRKIPRPIPQLIPLNASTPNQTPGKPLPGEPPAKKVKESADVEETDKSNDLPSDMTLNSAMPKEISIRKKNESFFDKLKERLLTETGEDGVLICKNCGFQSKCLSEHSVHEKTCLLQFNKISSNPLHQNLGSTRCQNCRHRCKSSADLYLHMKTCVKNDFTIRDPASGIPNLEHRNTITKSSIDSERHPMENVVFVWNNINQSASKFNTPLDININDDSTLPEQRTLDSDIADDGENMNLSPSQAAGKKVFKCPHCMFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHTEAKVLMTDETGRRNYSKYNKFLAVSVLNENGENEFHYIDQNAAADATIDEESVNDVNDSMNPSFDMQPLNLQTHPSDMNIGSDNDMKRPKKTLWKCKKCNYKDSSKEALLEHVREHSKEEAENKKPENMPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHEGIIKVITTVKPKPDLSAMTANDGQSDMCTKCPFKTNDKNALLAHLQHHQPSPQSVYKCYLCPFFVKEEYELNQHLVLHGINDPDDYEFIAKTMGNKSPFHETSSTPNHSSNKRHKCNECPYETNSKSQFMYHEQFHRISTDTPYKCPECNYSVSKRHLLNQHLRVHGIIPKKFEMDDMEGFSANYNQNYEESSTNFDEIPFVWVSAKNEFHKMFKCRYCSYVNSQKCKIPNHEKIHCISFDGEITCYKCLECKFTCDNKIRLAEHAKSHGELYGRIYCPVELDIPDEEQIAKLRKVIDEEQLNSLNDSPKDGQVLEENRETKTLYFCHKCPARFFEESELKVHEKFHDLTFSFKCKSCEFSVPQENELKSHNSVHSDEYNTRTKMLKFVHKIHLAHKAPRLQYVHCPATSEITWVAAEPDKKYVNEHSIKKSGDVKNTPKQYICKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHELLHENEGKPPPCDYESGDDPDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKINGYEESEGDNRENKEDENSGNIKLAIKTMPKRLPRSDFQQFSISDQQTLRLLQRRRSIESAMKENNTDAPVKDRKHHVCLFCPYTNQRLDAVTNHIKRHNERELAKLSGNQKCSFCNLVVVQTHFLREHLKTHFTYQKNLIPDCFVANENISFTIKKLDENEECTDIKLETPVNIISDDDKMYVKISTGEVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -