Amor036456.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apodemia mormo
Gene Symbol
-
Assembly
GCA_036924255.1
Location
JAUPFN010000030.1:684642-703657[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 8.1 1.1e+03 1.8 5.8 1 23 1096 1118 1096 1118 0.97
2 9 0.00012 0.017 16.9 1.4 1 23 1166 1189 1166 1189 0.97
3 9 0.076 11 8.1 0.2 2 23 1195 1216 1195 1216 0.97
4 9 7.9e-06 0.0011 20.7 3.4 1 23 1223 1245 1223 1245 0.98
5 9 0.00016 0.023 16.5 0.2 3 23 1252 1272 1251 1272 0.99
6 9 7.5e-06 0.001 20.7 3.1 1 23 1281 1303 1281 1303 0.99
7 9 0.00025 0.035 16.0 0.2 3 23 1311 1332 1309 1332 0.97
8 9 1.2 1.7e+02 4.4 0.4 2 13 1339 1350 1338 1361 0.81
9 9 0.091 13 7.9 3.5 1 23 1369 1392 1369 1392 0.95

Sequence Information

Coding Sequence
ATGTTACATAACACTGGCCCGTTTGGGCCTAATGAGACCCCAATTAACGTAAGTGGACAAGCGAGTATGTCGGATATAGGAGGCCAAATGAATATCGGTAATAGCATCAATAATTTACCTAAAATCGGCTCGCAGTCGTCACAGCCAGCTAATACACACTTTAATTTGCCAGATTACGCTAATTATGGGCTTAATATGAATGCCGCTATgaataattttcataattttcatcAAGCTGGATATCAACAAAGTTTGATTCAACAATCTGCATCGAATTCTTGGCAGAATAGTGTTTTACCGATGAATTTGAACACTCAAAGTGATCCGCATTCGATGCTTGgctattatgataaaaaatttgAATCGCAAACTGAATTAAGTgagcaaaattttaataaaagtatgCTGAATATACCCCAAGTGTATACAAAAGCTTTGCACAAACATTTAGGTATGGATGCTCATCCGGATTACTTTAATAACTTCAATAACTATTTAGGAAATAATCTTGATTTATGTGTTCGGTCACAAAAAGATTCACAAAGTACTTTAGACAGTAGACTAAACTTACAGCAAAAATCTAGATCGCAATTTGCGGAACAGATTGATTTAAGtcgcaataaaaatatagaaaatcaaaatattagcACTAGAAGTGCATTTTATCATAAATCCGATAAATTGGAATACCTCGAACAAGTATTAAACAGCAGATCTAAAGATGGGTATGTTGACATTGATGCACGATTAAGTTCACATCAAAAGTCACCACAAATATACTCTCAGCTTATTGGCTTAAATCCAAAAGACATGGAAAGTTTAAGGAACCAGCAACATGAATCAATGTCTACTTTCCCTGAACAAGTTGATTTAAGTAGTCGCAAGCCTATAGATTCAAATATAAGCAAATCAAGTTTTGGCTTTAATCCAAAAAATATAGAAAGCGCAAACTTGATTTCTAGAAGCCTTGAGCAACAAAGAAATTTGTCTCATTACCCTGAGCGAGATCTAAGCAACCAGATAAGAACCAGTAGTCCAAACATACCAACTTCTCAGTTACACAAGCTTGACAGATTCCCTTCTTATCATGATCAAGTTGATTTAAGTGGCCGTTCAAAAGATGAAAGGCCTCAATTATCAAAGGCAGAGAAAGTTCCATCTTATTATGATCAAGTAGATTTAAGAAGTCGTTCAAAAGACGAAATTTCTCAATTATCCAAACCAGACAGACTACCATCTTATCATGAACAAGTTGACTTAAGTAGTCATTCTAAAGATGCAACATTTCACCTGTCCAAACCAGATAGATTACCATCTTATTATGATCAAATAGACTTAAGAAGTCGATCTAAAGATGAAATTTGTCCATTATCTAAACCAGATAGACTACCATCTTATCATGATCAAGTTAACTTAAGCGGTAATTCAAAGGATGCAACTTCTCAACTGCCCAAGCCTGACAGACTACCCTTTTATTATGATCAAGTAAACTTAAGAGGTCGTTCAAAAGATGAAATTTCACAATTATCTAAACTAGATAGAATACCTTCTTATCATGATCAAGTTGACTTAAGCAGTAATTCTAAAGATGCAACTTCTCAGCTGCCCAAGCCAGATAGACTACCTTCTTATTATGATCAAGTTGATTTAAGTAGTCGTTCAAAAGATACAACTTCTCAACTACCCAAATCAGATAGACTACCATCATATCATGATCAAGTTGATATAATTGGTCattcaaaaaatgtaacttCTCAATTACACAAGCCTCTCCTGCCTTATCAAGAACAAGTTGACTTAAGTATTCGTTCAAAAGATGAAAGTCTTGAAATAACCAAGCAAGACAGAACATTGTCTTATCATGAACAAGTTGATTTAAGTAATCGCTCAAAAGATGAAAGTCCTCAATTGACCAAGCAAGATAGACTACCATCTTATTATGATCAAGTGGACTTGAGTAGCCGTTCAAAAGATGTGAGTTCTCAACTACCTAAGCAAGATAGGCTACTGTCTTATCATGATCAAGTTGATTTAAGTAGACATACAAAAGATACAACCACTCAACCACCCAAATTAGATAGATTACCACCTGATTATGATCAAGTTGACTTAAGTTGTCATTCAAAAGATGCAACTGTTCAACTTCCAAAGTCTGATAATTTACTATCTTATCATGACCAAATTGACTTAAGTAGTCGTTCAAAAGATATAAGTTTTCAAGCACAAGAATCAGACAAGTTACCATCTTATTATGATCAAGTAGACTTAAGTACTCGCTCCAAAGATATGATAAGTTCTCAACCACATAAGCCAGACACACTAACATCTTATAAACAAGCTGACTTAAGTAGTCaagtaaaaaatgtaagttcagAACTACAAGAGCCTGATGCATTACATCATTACGACCAAATTGACTTGAGTagcacaaaaaatgaaaataaagacAGCTTCTCTTTAGAGCTGCCATCAGATACTAAACAAGTTAATTTGGATAGGTCAAGTCTTCAAACTGATAACGCAGAACAAATTGATTCGAGTCATACTAAAGAAAGCATTGAAAACTCTCAACTCATCCATTCTCCTATAAAAGATGATGTGGAAAAGAGTTCAATAAACTCGCAGCAAGAAATACCAGAAGAGGAATCTCCTCAAATTATCACAGATGCTAAATCAAATGAAAACTTAGATTTATCTCTCAAATCACAAGAACCGTTAaaagatagtttaaaaaatcGTCCTAAACACAATTATTCAAATGACCCAGAACAAAGACGACGAAATTTAGCTAATACTGTTCGTATGATTGAAAACATTCTTATACAAACTACTAAGAAAAAAACTGAAGAAGATGCTAACAAAAATGAAGAAAAGGCTGAAGATGACCAGTTCAAAGATGATGATGTGAGTCAAAGTCCTCAAAGTGTTGATAACCTTAGTGACGATCAATCAATTAGCAGCACCGACGATATTAATGATGAAGAAATGGCaactgaaaatgaaaataaagcaCATGAAGTCTTTATAACAGAAATAAAGCAAGAGTGTCCATCAGAAtctgaaatggaagtaattgatgttaaaaaagaaaaaatagatGACATAACTATAAAAGTAGAGATAGCACCAGATTTAATGTACATAGAAAGCCTAAATCCTTTTCAAAGAGACTATTTTGGGGTACAGAGTGAAGAAGTTGGTGATGCTAACGTTCATGATTCAGAAAATAGTGTAGCAGTGGCATTAGATGCTATTAAAAATGgaACTGAACATAACAATTCATTTTACGAATGCCCACATTGTTGCTTGTTTTTCGCGCATCCGAAAAGATTCCTCATCCACACGAAATGGCATTCCTTTGGTCTGACCAACGAAAAGAGAATGGAATTGCAAAGAGAGAAAGAGATGAGGAAAACTATGAGACGCGAGGCCAAAGTTCTAGAGAGGATGCATCAGAACGAAGTGACGGAAGTAGAAAATGTGGCGGGGAAAACGTACAATTGCAATGATTGCGGAAAGGTGTTTTTGAAGAAAGCCAGTTTACAAAATCACAGACAAAGGTACCACCCGACCCGTCCCCGAGAGTGCAAGATCTGCGGCAAGCTGCTGGTGGGCTGGCTGGCGCTGCGTGACCACCACCTCACCCACTTCTCTGCGGCCGGCTACTACCAGTGCGATGACTGCCCCAAGAAGTTCAAATACTCACATTCTTTGGCAAAACACAGAGACACACATTTGGAGAAGACCCACGGGTGCCAGCAGTGCTCGAAGATGTTCGGCTCGGCGGCGCTGCTGAACGTGCACATGAAGACGCACGAGCGGGTGCTGCGCGGGGCCACGTTCCGCTGCACCTACTGCGGGAAGGGCTTCTTCGAGTCTTACCACTTGCAGGCGCACGAGCGCACGCACCGCAACGAGAGACCGTTCGGGTGTGAGATCTGCAAAACTGCGTTCGGAACTAAATCTGGACTTGCGAGGCATTTGAAAGTGTCTCATAGTTCTTCTAAACCTTGGGAATGTTCAACTTGCCATCGCTCGTTCGTGTCGGAGGCTATCCGGGACAGACATGAGCAAAGGAACCACGGCAACCCAGAGGACTTCAAATTTGTTTGCAAGCAGTGTCCGTGCCGGTACATGAAGCTGAAGGACTTGAGGAAGCATGTGTATAAAGTCCATCCCAAAGGAAGACGGAAGAAGAAATCTGAATCTGACAGCGAATAG
Protein Sequence
MLHNTGPFGPNETPINVSGQASMSDIGGQMNIGNSINNLPKIGSQSSQPANTHFNLPDYANYGLNMNAAMNNFHNFHQAGYQQSLIQQSASNSWQNSVLPMNLNTQSDPHSMLGYYDKKFESQTELSEQNFNKSMLNIPQVYTKALHKHLGMDAHPDYFNNFNNYLGNNLDLCVRSQKDSQSTLDSRLNLQQKSRSQFAEQIDLSRNKNIENQNISTRSAFYHKSDKLEYLEQVLNSRSKDGYVDIDARLSSHQKSPQIYSQLIGLNPKDMESLRNQQHESMSTFPEQVDLSSRKPIDSNISKSSFGFNPKNIESANLISRSLEQQRNLSHYPERDLSNQIRTSSPNIPTSQLHKLDRFPSYHDQVDLSGRSKDERPQLSKAEKVPSYYDQVDLRSRSKDEISQLSKPDRLPSYHEQVDLSSHSKDATFHLSKPDRLPSYYDQIDLRSRSKDEICPLSKPDRLPSYHDQVNLSGNSKDATSQLPKPDRLPFYYDQVNLRGRSKDEISQLSKLDRIPSYHDQVDLSSNSKDATSQLPKPDRLPSYYDQVDLSSRSKDTTSQLPKSDRLPSYHDQVDIIGHSKNVTSQLHKPLLPYQEQVDLSIRSKDESLEITKQDRTLSYHEQVDLSNRSKDESPQLTKQDRLPSYYDQVDLSSRSKDVSSQLPKQDRLLSYHDQVDLSRHTKDTTTQPPKLDRLPPDYDQVDLSCHSKDATVQLPKSDNLLSYHDQIDLSSRSKDISFQAQESDKLPSYYDQVDLSTRSKDMISSQPHKPDTLTSYKQADLSSQVKNVSSELQEPDALHHYDQIDLSSTKNENKDSFSLELPSDTKQVNLDRSSLQTDNAEQIDSSHTKESIENSQLIHSPIKDDVEKSSINSQQEIPEEESPQIITDAKSNENLDLSLKSQEPLKDSLKNRPKHNYSNDPEQRRRNLANTVRMIENILIQTTKKKTEEDANKNEEKAEDDQFKDDDVSQSPQSVDNLSDDQSISSTDDINDEEMATENENKAHEVFITEIKQECPSESEMEVIDVKKEKIDDITIKVEIAPDLMYIESLNPFQRDYFGVQSEEVGDANVHDSENSVAVALDAIKNGTEHNNSFYECPHCCLFFAHPKRFLIHTKWHSFGLTNEKRMELQREKEMRKTMRREAKVLERMHQNEVTEVENVAGKTYNCNDCGKVFLKKASLQNHRQRYHPTRPRECKICGKLLVGWLALRDHHLTHFSAAGYYQCDDCPKKFKYSHSLAKHRDTHLEKTHGCQQCSKMFGSAALLNVHMKTHERVLRGATFRCTYCGKGFFESYHLQAHERTHRNERPFGCEICKTAFGTKSGLARHLKVSHSSSKPWECSTCHRSFVSEAIRDRHEQRNHGNPEDFKFVCKQCPCRYMKLKDLRKHVYKVHPKGRRKKKSESDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-