Amor035061.1
Basic Information
- Insect
- Apodemia mormo
- Gene Symbol
- Znf711
- Assembly
- GCA_036924255.1
- Location
- JAUPFN010000028.1:7407000-7432074[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00074 0.1 14.5 0.3 1 23 320 342 320 342 0.98 2 11 0.056 7.7 8.6 0.8 2 23 350 371 349 371 0.96 3 11 0.89 1.2e+02 4.8 1.8 1 23 375 398 375 398 0.80 4 11 0.0026 0.36 12.8 2.2 1 23 405 427 405 427 0.99 5 11 9.7e-05 0.013 17.2 2.2 1 23 433 455 433 455 0.97 6 11 2.5e-05 0.0035 19.1 1.5 1 23 461 484 461 484 0.97 7 11 0.0019 0.27 13.2 1.3 1 22 489 510 489 514 0.93 8 11 9.1e-06 0.0013 20.5 0.6 1 23 522 545 522 545 0.96 9 11 4.6e-05 0.0063 18.3 0.1 3 23 553 574 552 574 0.96 10 11 3.7e-05 0.0051 18.6 0.1 2 23 583 604 582 604 0.97 11 11 0.012 1.6 10.7 0.0 5 23 613 632 610 632 0.88
Sequence Information
- Coding Sequence
- ATGCAGAACTTTTGCCGCTTATGTTTATCGACTGATGTTGTACTTCTTACAATGACTGTTTTCGAAGTTGAATTTTATGaacattttattcaaaagGAACAAACGAGTACTAACATCTTAGTTAAATCcagatttttatcaaaatcagacaCAAAATATCATTACCTAGGTCCAAATGTAAACCGAAACAAAGTGAAAGGTGAGATCTCATTAAATGACCCAATATCAGACATTCACTTCAAAGGTGAAGATACCTCAGAGTGTGTAGATGAAGCGTCGTTGATGATGATGAAGAATGGCGTCAGGAGTGATGAGATTCCTTATAAAACAGAAAAGGAACAAACGAGTACTAACATCTTAGTTAAATCCAGATTTTTGTCAAAATCAGACACAAAATATCATTACCTAGGTCCAAATGTAAACAGAGACAAAGAAAAGGAGATCTCATTAAATGACCCAATATTAGACAGTCACTTTAAAGATGAAGATTTCTCCGACTATGTAGACGAAACACCGTTGATGATGATGAAGAATGGCGTTAGGAGTGATCAGATTCGTTGTAAAACTGAAAAGATAAAATTGCCGAGTTCAAATGTAAGCTTGGATGAAGTCAAAGATGCAGTCTCTTTAGATGATCCAATATCGAAGGACCATATCACGGTTACAGAGGATATATCAGATCATATTGATGATTTACCATTGACAACTCTGATGAATGTTGTGGGGGGTGATGAGATTGCCCATCAACGTGAAATGaaaaaagaacATTATAAAAAGAGAAGGAAGAATGggaagttaattaaaaaaacaaaacgtacTAAAAATGCCAACAAAGATGGCTTCACCTCGCGTATGGTGCAAGAAACAGAAgaatatattgttataaaattaactAAAGAACAGGTTTTAGAGGAGATGCGCAAACATTCAGAAACAGATAAATACAAAATGGCTCCATACAAATGTGAAGACTGCGTAAAAGGTTTTAACTTTGAAGACGTCTTACAGAGCCACTTGGAGAAACACTCACCGAAAAATGGTAATTTACGATGCGAGTTGTGTTCTCAGTACTGTCCCAGTGCTGTGTCTTTAAGGGGTCATTTGAAGTCGCACACTACGagGTACAAATGTAAAGTGTGTGGGTTGGTCCGTTTGTCCCGGCAGCACGTGTTAGAGCATCACTCGCTAGAGCACACTTCATCCACTGCCGCCTACCGCTGTAGTCAGTGCGACTACTCCACCAaCAAAAGAACTGTCATGCAAAGGCACGTAAGGATGCATTCGTCGAATGAATCGTTCGCTTGTCATCTGTGCGGTAAACTGTACAAGAGCAGAGAGTCTTTACGGGTCCATACTATGCGTCATGATAAGAGCAAAAGACACCAATGCGGGATATGTAACCGCTCGTTTATATACGCGAAGCAGTTGACCAATCACACGCAGTCCGTGCATGTGCGCAAGGATTACTATTGTGTGGAGTGCGACGTCATGTTCAAATCTATGTACACACTGAAACAGCATTATCAACGGGCCAAAAGACATAGGAATTCATCTTCTTACAAGTACAGTTGTCCCCATTGCGATCAGCGCTTCATATCCCCATCGACGCTGGCCACTCATGAGACCACAGTACATGGAGCCCCGAAGCGTGAGTCCTGTGCTATCTGTGGCCGCGCTTACAGCAGCGCTGAGGCTTTAAGACTGCATTTGAGGCGGTCTCACTCCAATACACAAGCGCCGAGGATACCGTGTCAAGTCTGCGATCGATCTTTCTCAcgcAAGGCAGTCGCCATAGTGCATATGCGCACGCACACAGGCGAGCGGccgtacgagtgtgagtgtggAGCGACGTTCACACAACCCGCTGCTTTAAGGGCCCACTGGGCCGCTAAACATCAGAAAGAAGATAATCGACAATCAGAGTTAAAAATGACTTaa
- Protein Sequence
- MQNFCRLCLSTDVVLLTMTVFEVEFYEHFIQKEQTSTNILVKSRFLSKSDTKYHYLGPNVNRNKVKGEISLNDPISDIHFKGEDTSECVDEASLMMMKNGVRSDEIPYKTEKEQTSTNILVKSRFLSKSDTKYHYLGPNVNRDKEKEISLNDPILDSHFKDEDFSDYVDETPLMMMKNGVRSDQIRCKTEKIKLPSSNVSLDEVKDAVSLDDPISKDHITVTEDISDHIDDLPLTTLMNVVGGDEIAHQREMKKEHYKKRRKNGKLIKKTKRTKNANKDGFTSRMVQETEEYIVIKLTKEQVLEEMRKHSETDKYKMAPYKCEDCVKGFNFEDVLQSHLEKHSPKNGNLRCELCSQYCPSAVSLRGHLKSHTTRYKCKVCGLVRLSRQHVLEHHSLEHTSSTAAYRCSQCDYSTNKRTVMQRHVRMHSSNESFACHLCGKLYKSRESLRVHTMRHDKSKRHQCGICNRSFIYAKQLTNHTQSVHVRKDYYCVECDVMFKSMYTLKQHYQRAKRHRNSSSYKYSCPHCDQRFISPSTLATHETTVHGAPKRESCAICGRAYSSAEALRLHLRRSHSNTQAPRIPCQVCDRSFSRKAVAIVHMRTHTGERPYECECGATFTQPAALRAHWAAKHQKEDNRQSELKMT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -