Basic Information

Insect: Apodemia mormo
Gene Symbol: -
Assembly: GCA_036924255.1
Location: JAUPFN010000001.1:43937194-43962655[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 3.2e-05 0.0044 18.8 2.3 1 23 196 218 196 218 0.95

2 29 0.0007 0.097 14.5 1.2 2 20 273 291 272 293 0.93

3 29 8.5e-05 0.012 17.4 2.8 3 23 324 345 322 345 0.96

4 29 0.11 15 7.6 0.4 1 23 396 418 396 418 0.97

5 29 0.059 8.1 8.5 0.0 1 23 437 459 437 459 0.96

6 29 4.9e-05 0.0068 18.2 1.5 2 23 498 519 497 519 0.96

7 29 0.0021 0.29 13.1 5.8 2 23 555 577 555 578 0.96

8 29 5.6e-05 0.0078 18.0 1.7 1 23 627 650 627 650 0.97

9 29 0.00083 0.11 14.3 0.9 2 23 707 728 706 728 0.96

10 29 0.0036 0.5 12.3 6.1 2 23 740 761 739 761 0.97

11 29 0.033 4.6 9.3 0.9 2 23 773 794 772 794 0.96

12 29 0.0085 1.2 11.1 0.8 1 23 804 826 804 826 0.98

13 29 0.0077 1.1 11.3 5.1 1 23 854 876 854 876 0.95

14 29 0.00033 0.046 15.6 3.1 1 23 887 909 887 909 0.98

15 29 0.00021 0.029 16.2 1.2 1 23 917 939 917 939 0.97

16 29 0.0015 0.21 13.5 0.3 2 23 959 981 958 981 0.97

17 29 2.3 3.2e+02 3.5 0.3 1 23 999 1021 999 1021 0.85

18 29 0.7 96 5.1 2.8 2 23 1029 1050 1028 1050 0.95

19 29 0.26 36 6.5 1.8 2 23 1061 1083 1060 1083 0.94

20 29 0.00088 0.12 14.2 0.3 2 23 1106 1127 1105 1127 0.95

21 29 9.4 1.3e+03 1.6 0.1 2 20 1131 1149 1130 1150 0.86

22 29 0.00099 0.14 14.1 0.2 2 23 1208 1229 1207 1229 0.95

23 29 0.99 1.4e+02 4.6 3.4 5 23 1239 1257 1236 1257 0.94

24 29 0.0049 0.68 11.9 0.5 2 23 1268 1290 1267 1290 0.95

25 29 0.52 73 5.5 2.2 2 23 1307 1325 1307 1325 0.89

26 29 2 2.8e+02 3.7 1.1 2 20 1329 1347 1329 1349 0.87

27 29 0.57 79 5.4 0.7 2 23 1397 1418 1396 1418 0.93

28 29 0.0094 1.3 11.0 0.4 2 23 1429 1451 1428 1451 0.96

29 29 2.5 3.5e+02 3.3 3.6 2 19 1489 1506 1488 1508 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	3.2e-05	0.0044	18.8	2.3	1	23	196	218	196	218	0.95
2	29	0.0007	0.097	14.5	1.2	2	20	273	291	272	293	0.93
3	29	8.5e-05	0.012	17.4	2.8	3	23	324	345	322	345	0.96
4	29	0.11	15	7.6	0.4	1	23	396	418	396	418	0.97
5	29	0.059	8.1	8.5	0.0	1	23	437	459	437	459	0.96
6	29	4.9e-05	0.0068	18.2	1.5	2	23	498	519	497	519	0.96
7	29	0.0021	0.29	13.1	5.8	2	23	555	577	555	578	0.96
8	29	5.6e-05	0.0078	18.0	1.7	1	23	627	650	627	650	0.97
9	29	0.00083	0.11	14.3	0.9	2	23	707	728	706	728	0.96
10	29	0.0036	0.5	12.3	6.1	2	23	740	761	739	761	0.97
11	29	0.033	4.6	9.3	0.9	2	23	773	794	772	794	0.96
12	29	0.0085	1.2	11.1	0.8	1	23	804	826	804	826	0.98
13	29	0.0077	1.1	11.3	5.1	1	23	854	876	854	876	0.95
14	29	0.00033	0.046	15.6	3.1	1	23	887	909	887	909	0.98
15	29	0.00021	0.029	16.2	1.2	1	23	917	939	917	939	0.97
16	29	0.0015	0.21	13.5	0.3	2	23	959	981	958	981	0.97
17	29	2.3	3.2e+02	3.5	0.3	1	23	999	1021	999	1021	0.85
18	29	0.7	96	5.1	2.8	2	23	1029	1050	1028	1050	0.95
19	29	0.26	36	6.5	1.8	2	23	1061	1083	1060	1083	0.94
20	29	0.00088	0.12	14.2	0.3	2	23	1106	1127	1105	1127	0.95
21	29	9.4	1.3e+03	1.6	0.1	2	20	1131	1149	1130	1150	0.86
22	29	0.00099	0.14	14.1	0.2	2	23	1208	1229	1207	1229	0.95
23	29	0.99	1.4e+02	4.6	3.4	5	23	1239	1257	1236	1257	0.94
24	29	0.0049	0.68	11.9	0.5	2	23	1268	1290	1267	1290	0.95
25	29	0.52	73	5.5	2.2	2	23	1307	1325	1307	1325	0.89
26	29	2	2.8e+02	3.7	1.1	2	20	1329	1347	1329	1349	0.87
27	29	0.57	79	5.4	0.7	2	23	1397	1418	1396	1418	0.93
28	29	0.0094	1.3	11.0	0.4	2	23	1429	1451	1428	1451	0.96
29	29	2.5	3.5e+02	3.3	3.6	2	19	1489	1506	1488	1508	0.91

Sequence Information

Coding Sequence: ATGGCTCTCAAGCTCGGTAAATGTAGATTGTGCCTCAAACTTGGCGACTTTTATTCCATCTTTGCTATGGATAACAATATCCAACTGGCAGAGATGGTCATGGAGTGCGCTAGAGTAAAGATATATGAAGGAGATGGTTTGCCTGATAAAATTTGTACAGAGTGTATTCAAAAGCTGAGTGGTGCTCATATATTTAAACAACAATGTGAAAGGTCTGATCAGGAGCTTCGCCGGAATTATGTTCCACCACCAGGTTTTAGTGCCACACCACCTCCGCAAAACAGACAAAGCAGTGACTCGGCTATATCGTCACATACCGAGGTTTCTAAACCATCTTCATCAATCGATCGCAATGAAACTAAGCTACCTACCCCGCGAGGTCGCAAAAGGAGTGGAGATAGTATTGGCGAAATTTCTAATAGCAGTCAATCTCATGACTATCGCCCGGGAATATCTAAACGAGTTGACGAATTACGAAAGTCTCAGAAAAAACCAAAATACCATTCAGCCAACTCAGATTCTGATTACGAGGACAATGGTGGATCACTTTATTCAGCTGAAACTGATTCAGATGATCTCTtagattttaaatgtaaaatgtgtcctaaaaaatttaaatctagtAAAAGTTTGGCAAGTCATATGGGTTTCCATAAGAGATCTAGTAAAGGAATGCTAGAAAATGCCATCAATGAATCAGAGGACAATCACTTTGATAATAATTTACCTAACattgataaggaagttactacaCCTGACAAAAGCCAAGAATCTTTCAATGATATTGAAGATGCAGATGATGTTGAAGATAAACTAAAGTGCGATAAATGCGACAAAACTTTCAAGCTAAAGATAATGTTGAAACGACATCATGACATTTGTAAGAAATCACCAACAAAGAAACTTTTAGTGTCCTTAGAGCCTATAGATGGTCATGTACCTCCACGCACAAATGAAAACAAAATCAATTGTGAAATGTGTACAACAAAGTTTAAAACCATGGATAATTTAGAAAAACACATGAGAATTTGTCATGCAGCTGTACTTAAGAAAAATGGAGGAGAACATAGAAAGGAAGATAGCAAAATAAATGTACCTTGCTTTTACTGTAAACAACCTTTTGAAGATTATTATGCTCATAGTGCTCATTTCCAAGTTTGTCCGGAGAAAAATGATTCAAGTTCATTTGAGTGCACTGTATGCAACAAACTTATTTCCAAAAAAGCAGCTTATTTTTTGCACTTAAAAGCACATTTTTTTCCTATAACTCCAACTAAAAGTATAGAACACAAATCAACTCCACAAGTCTTTCAATGTCGCTTATGTGAAGAAAAGCTGGATAGTCAGGACGCGTTGATCAGTCATCTTGCTGGACATATGTCTAATGCAGAAGACAATGGAGGAGGTGATGATGATTCtaaatcCGCCTCAATTGACGATACCTCATCTGTACACTCGGACTATGGCGGAAAGACTCCTCTAGGTGGCTTAAAATGTAAGGTCTGTGACAAATCATTTACATACAAAAAGGCTCTTTTGACTCACGAATTAAAACATACTGAAGAAGAAATAAAGGTTAAGACTGAGCCACCTGATAAAAAACTCTCCTCTGAAGGGAATTCAGATCTTGAGTCTAGTCAAGATGAGGGGGAAGATGATAATACCTGCGATATTTGCGAAAAACAATTCTCATACAAACGTCTCTTGATACACCATAAACGCACAAAACACCATATGACATCTGGAACTAAACGCGCCAAAGTAAACTTAAAAGATTGCATGGTTCGTTGTCTTATTTGTGACATAGAAATGAAAGTGAGTGCCATCAATGAACATAACCAAACTCATATGTCAGTTAATATGAAACCCAGAAATATTTATACATGCACATTATGCAACATGACATTTAAAAGTTGCAGTGCTCTGGCAAATCACATAAAACTCGTGCACAGACTAAAACAACAGGTGCCAAAGTTGAATTTGTCTAATCCAGACTTGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCAGAGCCCCTGGACGAAGTCCAGACTCACAACGGCTTTGGTGAGGCTTCTGCCAATGAAAATACACCTCTAGTTAACATGGCTGGTCTGACTTGCCATATATGTAACAAACAACTGCCTACATTGATCTCTTTGAAGAGACATATAAATTGGCACAAAAATGTGGGAAATAATCTTGAGAAGAAATTGGAGTGTTTTATCTGTAAAGAGACCTTCAGGTTCCAGTGCCATTATAAGATGCACATGCGGGTACACTATCGCGACACCAATCTCGACCCTAAGCACCTTACGTGTCTCATCTGTGGCCGTAAAAGTAAACATCTGCGAGCTGCTCAAGCTCACATGAATTATCATAAACAGACGAGATTCCAAAGCAAAGATTATGAATGTTCAATTTGTAGAAAAGTTTTCCAGTTCAGAAAAGTCTATCTAACCCATATGGCTGTCCACTACAAGAAAGGAGAAAGTGCAAATTCAATTGTTGGCTATGAACTACCGTTGACTGCTGATCGGACTGTATTTGATGGATCACATACATGTCAAATCTGTGGCAAAGTTTGTGATTCCGAGAACTCATTAAAACATCATACTACATGGCATAAGTCTAAAACTTTATTGTATGGAGCTCGTCATCAATGTGATATCTGTAATATTCAGTTTACCAACAAGAGAAGGCTGGAGCTTCATACAAGGACACATTTTGAAGATGATAATGGCCCATTTAAGTGTCACATATGTGGGAAGGGATATATTGTAGAAGATTATTATAGAAGACATGTGAAAGGTCACAACTTTGATCATCAGTCACATAAAAAACGTATAGAGAAGCTTAGAAAAGACAAAGTCAAGTGTCCTATATGTACTCGTTACTACCCAGACTTGGTTAAACTTATACGCCATCTGAAACGTACTCATCCTGAAAGCAAAATGATAAAAGAAGATCCAGATGCACCACCGCCAAATTATTACTCATGTAAACTCTGTGCAAAAGTATTCTTAGATGAGAGAAGACTGCAGTATCATGAAGAAGCTCATTTAAGGAAACcagaatttataaaatgtaaattctGTGGCAAGAAAACCATTTCCATGAAGAATCATAGAGTACACATCAAAGGCCACTTAACAcagaaatatattgataacCCACTTAAGTGTCCAAATTGTGATGAACACTTCTTGAGGGGATATGACTTGCATTATCATTTACGAGATGTgcataaaattaatgaaacatGGATAGCTGAACGTGGCCCTCAAACTTTGGATGGGCCATTAAAAGAATTGCAGTGTTCAATATGTTTTAAAGTTCTAGCAAGTAAAGCCAATTTTGAAAGGCATATTGATTATCACAACTCTCTCAGATGTAACTACTGTTTTGAATACTTTGGAGGTTCAAGATTTTTAGAAGGTCACTTAGCTTTTAGTTGTGAGAAGAAGAAGATTATTGGTGATACTGAAGTATATCCAAAGCGGGTGAAATGTCATATATGTTACAAACCATTCCATTTGCAAGTAAAATTAGATTGTCATTTAAGAACACAGCATGACATAAAAGTTTTCAAAAAAGCGTCGGCGGGAAAACAAGAAATTGTATGTGATTATTGTTTTAAGGTTTTCGAGAATGAATATGCATTAAATACCCATAAGATTTACCACCGAACAGTTGGTTATTATGGGTGTATTTACTGCAACAGAAAGTTTGGTACAATGAGCTTGTACAAAAAACATAAGAACCACCACTTTGCACAACTACATGTTGATAATCCTGTTAAATGCGAGCACTGCGACGAAACATTTGTTCCATTCAGGGACATGATATACCATATGAGAGATGTTCATGGTGATGATAAAGAATGGATTATCTTACCAAAGGAGTCTAAAGAAGAGACATGCCcaatatgcaataaaatattctttaatcTCCACAGACACCTTGATTATCATGAggaaaatagatgtaaaaaatGTGGAGAATATTTCTACTCAACCTTGGATTATGATAATCATCTTTGTGCGATCGATAGCGATGACGAAAATACAGAAGTATATGCAACAGAAGTGCCAAAATATGAGGAATGTCGATTCTGTTTTAAGCCTTGTACAAAAAAGAATTCTGGTAAAAAACACGACAACATTCATAAAACTTCTGGAGCAATATCTTGTCGCTTTTGTACTCTTAAATTTAAGACTATAGATGCATTTAATATTCATGCATTTTCACACAGAAACCGAAAGTACAAGACAAAACCGATAAAATGTCGTGTTTGCAAAGAACGATTTGTTAAATATGGGCCATTTATAAAGCATATGAAGATAGTGCACAAGTCTACTAAGAAACTTCACTATAGAGCAGTGGTAAAGCCTGAGAAGTGTGTTGTTTGTGGCGATGACTTTCCAAACCTGCACAATCATTACCGCGCACATTTACAAAATCAATGTCAaacatgtaataaatatttcacatctaGTAGGGTATTCTCACAGCATAGTTGCGACAAGGAGGATTCTGATCCAAGCAAAGTATTTACTTGTGATGCTGATTtggttaaattaattaatgaatatGTCCCCAAAGATGAGAAAGATGATGAAAAGTATTATGGTCATGACGATGATGACGAGGAAAATGAAGAAACATTAGAATCTGCAGTAGAAGATCCTGAAGGAACACAGGTCgcaaaagttaacaaaacagaaaAGGCGCCACGGACATATGGAAAGAAAGTCAAAAAGCCAACTTCACAATCCAACCCACAATCCAATCCAAACCAATCTCAGGATGAATCAAGTCAGAATTCCATAGATATAGATGAAACAGATTTGCATGCTATGGTACACGCACCTATAATATCAGACGTGCTCTCTCTTTATAAGAATAAAGATGGTGATAAAGAAGATGATGTTGTAATACTAGATGACGAAGATTCTATTGGATTTGATTCCACTCCTGTTGTAATAACTATTGATGATTAG
Protein Sequence: MALKLGKCRLCLKLGDFYSIFAMDNNIQLAEMVMECARVKIYEGDGLPDKICTECIQKLSGAHIFKQQCERSDQELRRNYVPPPGFSATPPPQNRQSSDSAISSHTEVSKPSSSIDRNETKLPTPRGRKRSGDSIGEISNSSQSHDYRPGISKRVDELRKSQKKPKYHSANSDSDYEDNGGSLYSAETDSDDLLDFKCKMCPKKFKSSKSLASHMGFHKRSSKGMLENAINESEDNHFDNNLPNIDKEVTTPDKSQESFNDIEDADDVEDKLKCDKCDKTFKLKIMLKRHHDICKKSPTKKLLVSLEPIDGHVPPRTNENKINCEMCTTKFKTMDNLEKHMRICHAAVLKKNGGEHRKEDSKINVPCFYCKQPFEDYYAHSAHFQVCPEKNDSSSFECTVCNKLISKKAAYFLHLKAHFFPITPTKSIEHKSTPQVFQCRLCEEKLDSQDALISHLAGHMSNAEDNGGGDDDSKSASIDDTSSVHSDYGGKTPLGGLKCKVCDKSFTYKKALLTHELKHTEEEIKVKTEPPDKKLSSEGNSDLESSQDEGEDDNTCDICEKQFSYKRLLIHHKRTKHHMTSGTKRAKVNLKDCMVRCLICDIEMKVSAINEHNQTHMSVNMKPRNIYTCTLCNMTFKSCSALANHIKLVHRLKQQVPKLNLSNPDLADFCEVVVTKAEPLDEVQTHNGFGEASANENTPLVNMAGLTCHICNKQLPTLISLKRHINWHKNVGNNLEKKLECFICKETFRFQCHYKMHMRVHYRDTNLDPKHLTCLICGRKSKHLRAAQAHMNYHKQTRFQSKDYECSICRKVFQFRKVYLTHMAVHYKKGESANSIVGYELPLTADRTVFDGSHTCQICGKVCDSENSLKHHTTWHKSKTLLYGARHQCDICNIQFTNKRRLELHTRTHFEDDNGPFKCHICGKGYIVEDYYRRHVKGHNFDHQSHKKRIEKLRKDKVKCPICTRYYPDLVKLIRHLKRTHPESKMIKEDPDAPPPNYYSCKLCAKVFLDERRLQYHEEAHLRKPEFIKCKFCGKKTISMKNHRVHIKGHLTQKYIDNPLKCPNCDEHFLRGYDLHYHLRDVHKINETWIAERGPQTLDGPLKELQCSICFKVLASKANFERHIDYHNSLRCNYCFEYFGGSRFLEGHLAFSCEKKKIIGDTEVYPKRVKCHICYKPFHLQVKLDCHLRTQHDIKVFKKASAGKQEIVCDYCFKVFENEYALNTHKIYHRTVGYYGCIYCNRKFGTMSLYKKHKNHHFAQLHVDNPVKCEHCDETFVPFRDMIYHMRDVHGDDKEWIILPKESKEETCPICNKIFFNLHRHLDYHEENRCKKCGEYFYSTLDYDNHLCAIDSDDENTEVYATEVPKYEECRFCFKPCTKKNSGKKHDNIHKTSGAISCRFCTLKFKTIDAFNIHAFSHRNRKYKTKPIKCRVCKERFVKYGPFIKHMKIVHKSTKKLHYRAVVKPEKCVVCGDDFPNLHNHYRAHLQNQCQTCNKYFTSSRVFSQHSCDKEDSDPSKVFTCDADLVKLINEYVPKDEKDDEKYYGHDDDDEENEETLESAVEDPEGTQVAKVNKTEKAPRTYGKKVKKPTSQSNPQSNPNQSQDESSQNSIDIDETDLHAMVHAPIISDVLSLYKNKDGDKEDDVVILDDEDSIGFDSTPVVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00256188;
90% Identity: -
80% Identity: -