Basic Information

Insect: Apodemia mormo
Gene Symbol: Znf296
Assembly: GCA_036924255.1
Location: JAUPFN010000004.1:1527176-1568721[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0034 0.47 12.4 1.8 2 20 147 165 146 169 0.95

2 12 0.013 1.8 10.6 0.5 5 23 210 228 207 228 0.90

3 12 0.00052 0.071 15.0 0.1 1 23 289 312 289 312 0.89

4 12 0.023 3.2 9.8 0.2 2 20 318 336 317 338 0.91

5 12 0.0007 0.097 14.5 0.4 1 23 346 369 346 369 0.97

6 12 1.1e-05 0.0016 20.2 1.5 1 23 386 408 386 408 0.98

7 12 5.9e-07 8.1e-05 24.2 0.7 1 23 415 438 415 438 0.96

8 12 1.2e-07 1.7e-05 26.4 2.4 3 23 452 472 450 472 0.96

9 12 0.00023 0.031 16.1 3.5 1 23 478 500 478 500 0.99

10 12 1.9e-07 2.6e-05 25.8 0.9 1 23 506 528 506 528 0.98

11 12 4.3e-07 5.9e-05 24.7 1.4 1 23 534 556 534 556 0.99

12 12 0.0031 0.43 12.5 0.3 1 23 562 584 562 584 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0034	0.47	12.4	1.8	2	20	147	165	146	169	0.95
2	12	0.013	1.8	10.6	0.5	5	23	210	228	207	228	0.90
3	12	0.00052	0.071	15.0	0.1	1	23	289	312	289	312	0.89
4	12	0.023	3.2	9.8	0.2	2	20	318	336	317	338	0.91
5	12	0.0007	0.097	14.5	0.4	1	23	346	369	346	369	0.97
6	12	1.1e-05	0.0016	20.2	1.5	1	23	386	408	386	408	0.98
7	12	5.9e-07	8.1e-05	24.2	0.7	1	23	415	438	415	438	0.96
8	12	1.2e-07	1.7e-05	26.4	2.4	3	23	452	472	450	472	0.96
9	12	0.00023	0.031	16.1	3.5	1	23	478	500	478	500	0.99
10	12	1.9e-07	2.6e-05	25.8	0.9	1	23	506	528	506	528	0.98
11	12	4.3e-07	5.9e-05	24.7	1.4	1	23	534	556	534	556	0.99
12	12	0.0031	0.43	12.5	0.3	1	23	562	584	562	584	0.98

Sequence Information

Coding Sequence: ATGGCTCAAGAAAATGGAGTAAAAATCGAGAATGTATGCAGGACCTGCTTATCAAAAGAATTGGAATTACTGTCTGTTTTCGAAATATACGTGGGAAATGTAACATtagaaaatgtaataaatgctGTCACCGGAGTTAAGATAGAAGAAGGTGATGGACTACCAACAACTGTATGCTGCATTTGTAAAGAGAAAGCTACTCGAGCTTATGACTTTAAAACACAGACACAAGAGGCAGATATCACATTGCGGGGCCTTGTCAAGACGGAAAAGAGTCAGCATGCCAAAACTGTTCCTGCCAttgaagttgGAACAGTTGACGTAAAGACGGAATTTAGTAGTGAAAACAATGAAGACTATTTGGACCTGGACTTCAGTGCAGCTCTTACTAATGGGGACGAATCTTACGGCGATGAAGATTACAAGGATGACACATTGCACTGTCCTCTGTGTGGGACATCGTACAAGGAGGCCGAGTGTCTCACCAAGCACATGTGGGAGAAGCACGCGCGCCTCATGGCCCCTAAAAAGAGGGGGCGGCCCAAGAAAGTAGCTAATACTATGCTGACCAAATTGAATGAGAAAGGAATGATAGAAAACAAACAAGGTGTAAAACAAACGTGTATTCTCTGTAAAGATGTGTTCAAAACCAAAGAAGATTATAAGAGGCATATGGCGATACATAAAGGTGGTACATATGGAACAGTGTATCTAGGTGGTACATATAGAACAGTGAGTCTAGGTGGTATACAGCGGGGGGAGGCACCAGATAGCGAGTCAGGGAAAGACCTCAGTATGTCTAGTGAGGTGCTGCTGCAAGAGATCGCAATGCCCAATGGTGGTGCGTTATGTTTGAGTTCAGTGTACCTGTGCGAGGTCTGTGGCCGCGTGTTCGTCTCTCTGGAGGAGCTGCACGTCCACCGCGACGACGAGCACCCGGAGTTGTCTGTGCGGTGTCACTTGTGTGAAAAGGTGTTCGCGTCAGTAAGAAGCGCCGAAAGACACCGTAGCGTATGTAAAGGGACAGAGCGCAAGTTCTCCTGCAACACATGCGGGGCTCGTTTCGGGTTCGAGATATCGCTGAACAAGCACATCCTGCGGAGCCACGTCGGCCAGAGCGTCTCCGTGCGATTCATAGACAGACAGAAGGCGCAATTCCGATGTGACATCTGTAATAAGGGGTTCTTCAGTAAAGAGCTATTGTCGAAGCACGAGCGAAGCCACAAGAACGTGGAAATACTCTACGAGTGTGACATGTGCAAGAAGAAATTCAATAgattaagtaatttaagggCACACATCCTGCAAGTTCACGAGAAAGGCAGTACTCAGAAGCGTTCCAACTCGTGCCTGTGCCTGTACTGcggacggagtttcaccaactCGTCGAACCTCATCGTGCATATGCGCCGCCATACCGGCGAGAAGCCGTACAAGTGCGATTTCTGTGAGAAAGGTTTTCCTCGGTCGTCGGACTTGCAGTGTCACAGGCGGTCTCATACTGGAGAAAGGCCATACATATGCCGAGTTTGCGGCAAAGGATTCTCCCGCAGCAATAAGCTGTCGCGGCATATGCGTGTACACACGGGCGTCAAACCGTACAAATGCACGTATTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTGAACCTCCACGTCCGTCGACACACGGGGGACAAGCCGTACGTCTGCGAGATTTGCGGGGACAGGTTTATACAGGGGACGGCGTTGCACAATCACCGCAGGGCGCATGGACACTATCCGCCCCCGCAGCCCGTGGCCTACGGCCAACCCCCGTCCACCCATCTGCATCTCGCCTCGCTTAACTAG
Protein Sequence: MAQENGVKIENVCRTCLSKELELLSVFEIYVGNVTLENVINAVTGVKIEEGDGLPTTVCCICKEKATRAYDFKTQTQEADITLRGLVKTEKSQHAKTVPAIEVGTVDVKTEFSSENNEDYLDLDFSAALTNGDESYGDEDYKDDTLHCPLCGTSYKEAECLTKHMWEKHARLMAPKKRGRPKKVANTMLTKLNEKGMIENKQGVKQTCILCKDVFKTKEDYKRHMAIHKGGTYGTVYLGGTYRTVSLGGIQRGEAPDSESGKDLSMSSEVLLQEIAMPNGGALCLSSVYLCEVCGRVFVSLEELHVHRDDEHPELSVRCHLCEKVFASVRSAERHRSVCKGTERKFSCNTCGARFGFEISLNKHILRSHVGQSVSVRFIDRQKAQFRCDICNKGFFSKELLSKHERSHKNVEILYECDMCKKKFNRLSNLRAHILQVHEKGSTQKRSNSCLCLYCGRSFTNSSNLIVHMRRHTGEKPYKCDFCEKGFPRSSDLQCHRRSHTGERPYICRVCGKGFSRSNKLSRHMRVHTGVKPYKCTYCEKAFSQSNDLNLHVRRHTGDKPYVCEICGDRFIQGTALHNHRRAHGHYPPPQPVAYGQPPSTHLHLASLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -